Rv1644 - c.-37C>T

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
134 Sensitive 11 RR-TB 4 HR-TB 10 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.1.2 151
lineage2.2.1;lineage4.1.2 1
lineage1.2.2.1;lineage4.1.2 4
lineage4.1.2;lineage4.3.4.2.1 1
lineage4.1.2;lineage4.2.2.2 1
lineage4.1.1;lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 159
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR4033146 Sensitive lineage4.1.2 None
SRR4033563 Sensitive lineage4.1.2 None
SRR10315693 RR-TB lineage4.1.2 None
SRR6855784 Sensitive lineage4.1.2 None
SRR6855723 Sensitive lineage4.1.2 None
ERR736853 HR-TB lineage4.1.2 None
ERR13260770 Sensitive lineage4.1.2 None
SRR4033149 Sensitive lineage4.1.2 None
SRR4033580 Sensitive lineage4.1.2 None
SRR4033582 Sensitive lineage4.1.2 None
ERR13260468 Sensitive lineage4.1.2 None
SRR4033096 Sensitive lineage4.1.2 za
SRR4033108 Sensitive lineage4.1.2 za
SRR4033106 Sensitive lineage4.1.2 za
SRR4033554 Sensitive lineage4.1.2 za
SRR4033567 Sensitive lineage4.1.2 za
SRR4033565 Sensitive lineage4.1.2 za
SRR4033572 Sensitive lineage4.1.2 za
SRR4033568 Sensitive lineage4.1.2 za
ERR736873 Sensitive lineage4.1.2 None
SRR4033587 Sensitive lineage4.1.2 za
SRR4033562 Sensitive lineage4.1.2 za
SRR4033553 Sensitive lineage4.1.2 za
SRR4033574 Sensitive lineage4.1.2 za
SRR4033558 Sensitive lineage4.1.2 za
SRR4033573 Sensitive lineage4.1.2 za
SRR4033581 Sensitive lineage4.1.2 za
ERR4809049 Sensitive lineage4.1.2 za
ERR5918063 Sensitive lineage4.1.2 za
ERR7911217 RR-TB lineage4.1.2 za
SRR1196577 MDR-TB lineage4.1.2 None
SRR9971232 RR-TB lineage4.1.2 None
ERR4818104 Sensitive lineage4.1.2 gb
ERR4818226 Sensitive lineage4.1.2 gb
ERR4819664 Sensitive lineage4.1.2 gb
ERR245791 Sensitive lineage4.1.2 mw
ERR245711 Sensitive lineage4.1.2 mw
ERR245754 Sensitive lineage2.2.1;lineage4.1.2 mw
SRR1173520 MDR-TB lineage4.1.2 None
SRR1181314 Sensitive lineage1.2.2.1;lineage4.1.2 None
ERR176591 Sensitive lineage4.1.2 mw
ERR181958 Sensitive lineage4.1.2 mw
ERR4814422 Sensitive lineage4.1.2 None
ERR11489052 MDR-TB lineage4.1.2 None
ERR2515274 Sensitive lineage4.1.2 None
ERR2515278 Sensitive lineage4.1.2 za
SRR11349206 RR-TB lineage4.1.2 None
SRR6855954 Sensitive lineage4.1.2 None
SRR1184327 MDR-TB lineage4.1.2 None
ERR163988 Sensitive lineage4.1.2 None
SRR4033594 Sensitive lineage4.1.2 za
SRR4033570 Sensitive lineage4.1.2 za
SRR4033575 Sensitive lineage4.1.2 za
SRR4033097 Sensitive lineage4.1.2 za
SRR4033559 Sensitive lineage4.1.2 za
SRR4033586 Sensitive lineage4.1.2 za
SRR4033593 Sensitive lineage4.1.2 za
SRR1183065 Sensitive lineage1.2.2.1;lineage4.1.2 None
ERR181882 Sensitive lineage4.1.2 None
SRR10315694 RR-TB lineage4.1.2 None
SRR1140925 Sensitive lineage4.1.2 None
SRR6855936 Sensitive lineage4.1.2 None
SRR6982224 Sensitive lineage4.1.2 None
SRR1181127 Sensitive lineage1.2.2.1;lineage4.1.2 None
SRR11342659 RR-TB lineage4.1.2 None
SRR4033103 Sensitive lineage4.1.2 None
SRR4033576 Sensitive lineage4.1.2 za
SRR4033596 Sensitive lineage4.1.2 za
SRR4033094 Sensitive lineage4.1.2 za
SRR4033114 Sensitive lineage4.1.2 za
SRR4033102 Sensitive lineage4.1.2 za
SRR4033125 Sensitive lineage4.1.2 za
SRR4033140 Sensitive lineage4.1.2 za
SRR4033598 Sensitive lineage4.1.2 za
SRR4033585 Sensitive lineage4.1.2 za
SRR4033099 Sensitive lineage4.1.2 za
SRR4033091 Sensitive lineage4.1.2 za
SRR4033137 Sensitive lineage4.1.2 za
SRR4033136 Sensitive lineage4.1.2 za
SRR4033092 Sensitive lineage4.1.2 za
SRR4033151 Sensitive lineage4.1.2 za
ERR11775629 Sensitive lineage4.1.2 None
ERR4809355 MDR-TB lineage4.1.2 za
SRR10686529 MDR-TB lineage4.1.2 None
ERR11488849 MDR-TB lineage4.1.2 None
ERR2515896 Sensitive lineage4.1.2 za
ERR2515285 Sensitive lineage4.1.2 za
ERR2516090 RR-TB lineage4.1.2 za
SRR28868883 Sensitive lineage4.1.2 None
ERR176647 Sensitive lineage4.1.2 mw
SRR4033090 Sensitive lineage4.1.2 None
ERR176703 Sensitive lineage4.1.2 mw
ERR176701 Sensitive lineage4.1.2;lineage4.3.4.2.1 mw
ERR176786 Sensitive lineage4.1.2 mw
ERR181697 Sensitive lineage4.1.2 mw
SRR6982385 Sensitive lineage4.1.2 None
ERR779652 HR-TB lineage4.1.2 None
ERR2432996 Sensitive lineage4.1.2 None
ERR2515412 Sensitive lineage4.1.2 za
ERR11730270 Sensitive lineage4.1.2 None
SRR4033143 Sensitive lineage4.1.2 za
SRR4033556 Sensitive lineage4.1.2 za
SRR4033557 Sensitive lineage4.1.2 za
SRR4033138 Sensitive lineage4.1.2 za
SRR4033150 Sensitive lineage4.1.2 za
SRR4033560 Sensitive lineage4.1.2 za
SRR4033590 Sensitive lineage4.1.2 za
SRR4033135 Sensitive lineage4.1.2 za
SRR4033583 Sensitive lineage4.1.2 za
SRR4033141 Sensitive lineage4.1.2 za
SRR4033139 Sensitive lineage4.1.2 za
SRR4033571 Sensitive lineage4.1.2 za
SRR4033095 Sensitive lineage4.1.2 za
SRR4033584 Sensitive lineage4.1.2 za
SRR4033142 Sensitive lineage4.1.2 za
SRR4033579 Sensitive lineage4.1.2 za
SRR4033597 Sensitive lineage4.1.2 za
SRR4033591 Sensitive lineage4.1.2 za
SRR4033561 Sensitive lineage4.1.2 za
SRR4033127 Sensitive lineage4.1.2 za
SRR4033107 Sensitive lineage4.1.2 za
ERR216971 HR-TB lineage4.1.2;lineage4.2.2.2 None
ERR216932 Sensitive lineage4.1.2 None
ERR473369 Sensitive lineage4.1.2 None
SRR11342658 RR-TB lineage4.1.2 None
SRR11349193 RR-TB lineage4.1.2 None
SAMN02585942 Sensitive lineage4.1.2 None
ERR11775580 Sensitive lineage4.1.2 None
ERR11488451 RR-TB lineage4.1.2 None
SRR4033147 Sensitive lineage4.1.2 None
ERR190366 Sensitive lineage4.1.2 mw
ERR212059 HR-TB lineage4.1.2 mw
ERR7737923 RR-TB lineage4.1.2 None
SRR6855909 Sensitive lineage4.1.2 None
ERR11488863 MDR-TB lineage4.1.2 None
SRR4033569 Sensitive lineage4.1.2 za
SRR4033578 Sensitive lineage4.1.2 za
SRR4033564 Sensitive lineage4.1.2 za
SRR4033589 Sensitive lineage4.1.2 za
SRR4033592 Sensitive lineage4.1.2 None
SRR1182994 Sensitive lineage4.1.2 None
ERR8479576 Sensitive lineage4.1.1;lineage4.1.2 None
ERR8975540 Sensitive lineage4.1.2 None
SRR2101389 Sensitive lineage4.1.2 None
SRR2101580 Sensitive lineage4.1.2 None
ERR037481 Sensitive lineage4.1.2 mw
ERR181987 Sensitive lineage4.1.2 mw
ERR323088 Sensitive lineage4.1.2 mw
SAMN02586100 MDR-TB lineage4.1.2 za
SAMN02350451 Sensitive lineage4.1.2 za
ERR216912 Sensitive lineage4.1.2 mw
ERR221559 Sensitive lineage4.1.2 mw
ERR11465812 Sensitive lineage4.1.2 None
SRR6896246 Sensitive lineage4.1.2 None
ERR11488953 MDR-TB lineage4.1.2 None
SRR1180271 Sensitive lineage1.2.2.1;lineage4.1.2 None
SRR9971293 Sensitive lineage4.1.2 None
SRR4033144 Sensitive lineage4.1.2 None
SRR1019125 Sensitive lineage4.1.2 None