Rv2245 - c.585C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
81 Sensitive
1 RR-TB
5 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.2 | 76 |
| lineage4.3.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage6.3.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage2.2.1;lineage4.4.1.2 | 1 |
| La1.6;lineage4 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage5.2 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6397814 | Sensitive | lineage4.4.1.2 | ca | SRR6397970 | Sensitive | lineage4.4.1.2 | ca | SRR6398036 | Sensitive | lineage4.4.1.2 | ca | SRR6397426 | Sensitive | lineage4.4.1.2 | ca | SRR6397549 | Sensitive | lineage4.4.1.2 | ca | SRR6397745 | Sensitive | lineage4.4.1.2 | ca | SRR6397932 | Sensitive | lineage4.4.1.2 | ca | SRR6397935 | Sensitive | lineage4.4.1.2 | ca | SRR6397804 | Sensitive | lineage4.4.1.2 | ca | SRR6397679 | Sensitive | lineage4.4.1.2 | ca | SRR6397822 | Sensitive | lineage4.4.1.2 | ca | SRR6397699 | Sensitive | lineage4.4.1.2 | ca | SRR6398009 | Sensitive | lineage4.4.1.2 | ca | SRR6397535 | Sensitive | lineage4.4.1.2 | ca | SRR6397366 | Sensitive | lineage4.4.1.2 | ca | SRR6397391 | Sensitive | lineage4.4.1.2 | ca | SRR6397631 | Sensitive | lineage4.4.1.2 | ca | SRR6398014 | Sensitive | lineage4.4.1.2 | ca | SRR6397960 | Sensitive | lineage4.4.1.2 | ca | SRR6398139 | Sensitive | lineage4.4.1.2 | ca | SRR6398021 | Sensitive | lineage4.4.1.2 | ca | SRR6397636 | Sensitive | lineage4.4.1.2 | ca | SRR6398092 | Sensitive | lineage4.4.1.2 | ca | SRR6397790 | Sensitive | lineage4.4.1.2 | ca | SRR6397681 | Sensitive | lineage4.4.1.2 | ca | SRR6397525 | Sensitive | lineage4.4.1.2 | ca | SRR21240041 | HR-TB | lineage4.3.3 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR6398080 | Sensitive | lineage4.4.1.2 | ca | SRR6397764 | Sensitive | lineage4.4.1.2 | ca | SRR6397326 | Sensitive | lineage4.4.1.2 | ca | SRR6397994 | Sensitive | lineage4.4.1.2 | ca | SRR6397780 | Sensitive | lineage4.4.1.2 | ca | SRR6397459 | Sensitive | lineage4.4.1.2 | ca | SRR6397959 | Sensitive | lineage4.4.1.2 | ca | SRR6397373 | Sensitive | lineage4.4.1.2 | ca | SRR6397338 | Sensitive | lineage4.4.1.2 | ca | SRR6397778 | Sensitive | lineage4.4.1.2 | ca | SRR6398104 | Sensitive | lineage4.4.1.2 | ca | SRR6397812 | Sensitive | lineage4.4.1.2 | ca | SRR6398015 | Sensitive | lineage4.4.1.2 | ca | SRR6397442 | Sensitive | lineage4.4.1.2 | ca | SRR6397687 | Sensitive | lineage4.4.1.2 | ca | SRR6397940 | Sensitive | lineage4.4.1.2 | ca | SRR6397977 | Sensitive | lineage4.4.1.2 | ca | SRR6397637 | Sensitive | lineage4.4.1.2 | ca | SRR6397678 | Sensitive | lineage4.4.1.2 | ca | SRR6398034 | HR-TB | lineage2.2.1;lineage4.4.1.2 | ca | SRR6397669 | Sensitive | lineage4.4.1.2 | ca | SRR6397488 | Sensitive | lineage4.4.1.2 | ca | SRR6397496 | Sensitive | lineage4.4.1.2 | ca | SRR6397538 | Sensitive | lineage4.4.1.2 | ca | SRR6397463 | Sensitive | lineage4.4.1.2 | ca | SRR6397983 | Sensitive | lineage4.4.1.2 | ca | SRR6398098 | Sensitive | lineage4.4.1.2 | ca | SRR6397388 | Sensitive | lineage4.4.1.2 | ca | SRR6397560 | Sensitive | lineage4.4.1.2 | ca | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR6397644 | Sensitive | lineage4.4.1.2 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6398062 | Sensitive | lineage4.4.1.2 | ca | SRR6397683 | Sensitive | lineage4.4.1.2 | ca | SRR6397604 | Sensitive | lineage4.4.1.2 | ca | SRR6397626 | Sensitive | lineage4.4.1.2 | ca | SRR6397360 | Sensitive | lineage4.4.1.2 | ca | SRR6397457 | Sensitive | lineage4.4.1.2 | ca | SRR6398111 | Sensitive | lineage4.4.1.2 | ca | SRR6397666 | Sensitive | lineage4.4.1.2 | ca | SRR6397707 | Sensitive | lineage4.4.1.2 | ca | SRR6397963 | Sensitive | lineage4.4.1.2 | ca | SRR6397489 | Sensitive | lineage4.4.1.2 | ca | SRR6397781 | Sensitive | lineage4.4.1.2 | ca | SRR6397992 | Sensitive | lineage4.4.1.2 | ca | SRR6397480 | Sensitive | lineage4.4.1.2 | ca | SRR6397346 | Sensitive | lineage4.4.1.2 | ca | SRR6397344 | Sensitive | lineage4.4.1.2 | ca | SRR6397508 | Sensitive | lineage4.4.1.2 | ca | SRR6398023 | Sensitive | lineage4.4.1.2 | ca | SRR6397916 | Sensitive | lineage4.4.1.2 | ca | SRR6397717 | Sensitive | lineage4.4.1.2 | ca | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None |
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