lineage | Count |
---|---|
lineage4.3.4.2 | 4 |
lineage4.8 | 17 |
lineage4.2.1 | 17 |
lineage2.2.1 | 190 |
lineage4.3.3 | 150 |
lineage4.3.4.2.1 | 66 |
lineage4.1.2.1 | 37 |
lineage4.5 | 14 |
lineage4.7 | 8 |
lineage4.2.2 | 12 |
lineage2.2.1;lineage4.5 | 1 |
lineage4.4.2 | 17 |
lineage4.1.1.1 | 1 |
lineage1.1.1 | 3 |
lineage4.9 | 3 |
lineage4.1.1.3 | 3 |
lineage4.6.1.2 | 4 |
lineage5.1.1 | 4 |
lineage2.2.1.1 | 11 |
lineage6.2.2 | 4 |
lineage4.2.2.2 | 14 |
lineage4.6.2.2 | 10 |
lineage2.2.1;lineage4.2.1 | 2 |
lineage1.1.2 | 5 |
lineage4.6.1.1 | 4 |
lineage2.1;lineage2.2.1 | 1 |
lineage1.1.3.1 | 3 |
lineage4.1.2 | 6 |
lineage2.2.1;lineage4.3.4.2.1 | 1 |
lineage4.1.2.1;lineage4.3.4.2.1 | 1 |
lineage2.2.1;lineage4 | 3 |
lineage2.2.1;lineage4.2.1.1 | 1 |
lineage4.3.2 | 3 |
lineage1.2.2.2 | 2 |
lineage4.9.1 | 1 |
lineage2.2.2 | 4 |
lineage5.1 | 2 |
lineage4.4.1.1 | 5 |
lineage4.1 | 2 |
lineage4.1.1 | 5 |
lineage4.2.1.1 | 1 |
lineage1.2.1.2.1 | 3 |
lineage4 | 6 |
lineage4.1.3 | 1 |
lineage4.3.4.1 | 1 |
lineage4.3.1 | 1 |
lineage6.2.3 | 1 |
lineage2.2.1;lineage4.3.3 | 1 |
lineage2.2.1.2 | 2 |
lineage4.3 | 1 |
lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 660 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR28394181 | HR-TB | lineage4.3.4.2 | None |
ERR11080964 | MDR-TB | lineage4.8 | None |
SRR6832468 | MDR-TB | lineage4.2.1 | None |
SRR27069422 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13284963 | MDR-TB | lineage4.8 | None |
SRR1184304 | MDR-TB | lineage4.3.3 | None |
ERR11488691 | MDR-TB | lineage4.3.4.2.1 | None |
SRR29051327 | HR-TB | lineage4.1.2.1 | None |
SRR15316019 | MDR-TB | lineage2.2.1 | None |
SRR5073723 | HR-TB | lineage2.2.1 | vn |
SRR14807570 | MDR-TB | lineage2.2.1 | None |
ERR2179776 | HR-TB | lineage4.5 | cn |
SRR1062847 | MDR-TB | lineage4.3.3 | None |
SRR12420756 | MDR-TB | lineage2.2.1 | None |
ERR11488779 | MDR-TB | lineage4.3.4.2.1 | None |
ERR6358850 | MDR-TB | lineage4.7 | None |
SAMN02398702 | Pre-XDR-TB | lineage2.2.1 | kr |
SRR29053345 | HR-TB | lineage4.2.2 | None |
SRR6824360 | MDR-TB | lineage4.5 | cn |
SRR6824559 | MDR-TB | lineage2.2.1 | cn |
SRR6824646 | MDR-TB | lineage2.2.1;lineage4.5 | cn |
SRR6824374 | MDR-TB | lineage2.2.1 | cn |
SRR13423613 | Pre-XDR-TB | lineage4.4.2 | None |
SRR29053403 | HR-TB | lineage4.1.1.1 | None |
SRR1196492 | MDR-TB | lineage4.3.3 | None |
SRR29051238 | HR-TB | lineage4.3.4.2 | None |
SRR20632802 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1140901 | MDR-TB | lineage2.2.1 | None |
SRR12420471 | MDR-TB | lineage2.2.1 | None |
SRR29055487 | HR-TB | lineage2.2.1 | None |
SRR13423542 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29273890 | Pre-XDR-TB | lineage4.3.3 | None |
SRR20632818 | Pre-XDR-TB | lineage2.2.1 | None |
SRR26937120 | MDR-TB | lineage1.1.1 | None |
SRR25207072 | MDR-TB | lineage2.2.1 | None |
SAMN01925669 | Pre-XDR-TB | lineage4.3.3 | None |
ERR212025 | HR-TB | lineage4.9 | mw |
ERR10680220 | MDR-TB | lineage4.1.1.3 | None |
SRR15364434 | Pre-XDR-TB | lineage4.9 | None |
SRR13583465 | HR-TB | lineage4.1.2.1 | None |
SRR29231820 | MDR-TB | lineage4.6.1.2 | None |
SAMN02403513 | MDR-TB | lineage4.3.3 | za |
SRR1723604 | MDR-TB | lineage2.2.1 | None |
ERR3170404 | MDR-TB | lineage5.1.1 | gh |
SRR12420479 | Pre-XDR-TB | lineage2.2.1 | None |
SRR11662258 | HR-TB | lineage4.5 | None |
SRR1173532 | MDR-TB | lineage4.3.3 | None |
SRR6824651 | Pre-XDR-TB | lineage2.2.1.1 | cn |
ERR10680166 | MDR-TB | lineage6.2.2 | None |
SRR8651577 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR8651662 | Pre-XDR-TB | lineage2.2.1 | None |
ERR7911496 | MDR-TB | lineage1.1.1 | vn |
SRR29772591 | MDR-TB | lineage4.1.1.3 | None |
ERR8975795 | MDR-TB | lineage2.2.1 | None |
SRR11349205 | MDR-TB | lineage2.2.1 | None |
SRR1723466 | HR-TB | lineage2.2.1 | cn |
SRR9971173 | MDR-TB | lineage4.3.3 | None |
ERR4831006 | Pre-XDR-TB | lineage4.2.2.2 | np |
ERR553062 | HR-TB | lineage4.1.2.1 | de |
ERR553000 | MDR-TB | lineage6.2.2 | None |
SRR2101249 | HR-TB | lineage4.6.2.2 | None |
ERR1199101 | MDR-TB | lineage4.6.1.2 | cd |
ERR2433003 | MDR-TB | lineage4.3.4.2.1 | br |
SRR1011483 | Pre-XDR-TB | lineage4.3.3 | None |
SRR6832386 | HR-TB | lineage4.2.1 | None |
SRR6832857 | HR-TB | lineage2.2.1;lineage4.2.1 | None |
ERR11082011 | MDR-TB | lineage2.2.1 | None |
ERR11488931 | XDR-TB | lineage4.3.4.2.1 | None |
ERR11488996 | MDR-TB | lineage4.3.4.2.1 | None |
SRR29539613 | HR-TB | lineage4.2.1 | None |
SRR1723918 | MDR-TB | lineage4.5 | None |
ERR11488384 | MDR-TB | lineage2.2.1 | None |
ERR11488575 | Pre-XDR-TB | lineage4.3.4.2.1 | None |
SRR27241220 | MDR-TB | lineage2.2.1 | None |
SRR12199399 | HR-TB | lineage1.1.1 | None |
SRR26399579 | HR-TB | lineage2.2.1 | None |
SRR12420650 | MDR-TB | lineage2.2.1 | None |
ERR11488655 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11488365 | MDR-TB | lineage2.2.1 | None |
ERR11488782 | MDR-TB | lineage4.3.4.2.1 | None |
SRR16370411 | MDR-TB | lineage4.3.3 | None |
SRR28394010 | MDR-TB | lineage4.3.3 | None |
ERR386844 | HR-TB | lineage4.6.2.2 | None |
SRR19276621 | Pre-XDR-TB | lineage4.8 | None |
SRR12420601 | MDR-TB | lineage2.2.1 | None |
SRR12420310 | MDR-TB | lineage2.2.1 | None |
SRR27107235 | HR-TB | lineage4.1.2.1 | None |
SRR1723549 | MDR-TB | lineage2.2.1 | cn |
SRR671744 | MDR-TB | lineage2.2.1 | cn |
SRR21691105 | HR-TB | lineage2.2.1 | None |
SRR6824465 | MDR-TB | lineage2.2.1 | cn |
SRR671784 | Pre-XDR-TB | lineage2.2.1 | cn |
ERR4800452 | Pre-XDR-TB | lineage2.2.1 | in |
SRR11662306 | MDR-TB | lineage2.2.1 | None |
SRR1723980 | Pre-XDR-TB | lineage4.4.2 | cn |
SRR1173156 | MDR-TB | lineage4.3.3 | None |
ERR4831002 | Pre-XDR-TB | lineage4.2.2.2 | np |
SRR15315838 | MDR-TB | lineage4.4.2 | None |
ERR4810981 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR11342640 | MDR-TB | lineage4.3.3 | None |
DRR188784 | HR-TB | lineage2.2.1 | None |
ERR11488768 | Pre-XDR-TB | lineage4.3.4.2.1 | None |
ERR11488356 | MDR-TB | lineage2.2.1 | None |
ERR10748418 | MDR-TB | lineage2.2.1 | None |
SAMN02053746 | MDR-TB | lineage4.3.3 | za |
ERR4796599 | Pre-XDR-TB | lineage2.2.1 | in |
ERR11488370 | MDR-TB | lineage4.3.4.2.1 | None |
SRR25207380 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1184321 | MDR-TB | lineage4.3.3 | None |
SRR1723608 | MDR-TB | lineage2.2.1 | None |
ERR7737762 | MDR-TB | lineage4.3.3 | None |
ERR3077943 | MDR-TB | lineage1.1.2 | None |
ERR6358705 | MDR-TB | lineage4.6.1.1 | None |
SRR921502 | Pre-XDR-TB | lineage2.1;lineage2.2.1 | None |
SRR21714052 | HR-TB | lineage1.1.3.1 | None |
SRR1165277 | MDR-TB | lineage4.3.3 | None |
SRR671758 | MDR-TB | lineage2.2.1.1 | cn |
SRR671727 | MDR-TB | lineage2.2.1 | cn |
SRR18714845 | HR-TB | lineage2.2.1 | None |
ERR9119471 | MDR-TB | lineage4.1.2 | None |
ERR4829907 | HR-TB | lineage4.1.2.1 | it |
ERR8975722 | MDR-TB | lineage4.3.3 | None |
SRR6824412 | MDR-TB | lineage2.2.1 | cn |
ERR12268385 | HR-TB | lineage4.8 | None |
SRR9971195 | MDR-TB | lineage4.3.3 | None |
ERR11488474 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11488544 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11488684 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11488837 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11488706 | Pre-XDR-TB | lineage4.3.4.2.1 | None |
ERR13291592 | HR-TB | lineage2.2.1 | None |
SRR10315701 | MDR-TB | lineage4.3.3 | None |
ERR3170488 | MDR-TB | lineage5.1.1 | gh |
ERR3509858 | MDR-TB | lineage2.2.1;lineage4.3.4.2.1 | None |
SRR12420737 | MDR-TB | lineage2.2.1 | None |
SAMN02350460 | MDR-TB | lineage4.3.3 | za |
SRR25340760 | MDR-TB | lineage1.1.2 | None |
SRR6824545 | MDR-TB | lineage2.2.1 | cn |
SRR11349204 | MDR-TB | lineage2.2.1 | None |
ERR13285109 | MDR-TB | lineage4.6.2.2 | None |
ERR11082674 | MDR-TB | lineage4.8 | None |
SRR16370469 | MDR-TB | lineage2.2.1 | None |
SRR1167285 | MDR-TB | lineage4.3.3 | None |
SRR3105741 | Pre-XDR-TB | lineage4.2.1 | None |
ERR8975914 | MDR-TB | lineage4.3.3 | None |
ERR4797441 | MDR-TB | lineage4.2.2.2 | in |
ERR4813791 | HR-TB | lineage4.3.4.2 | br |
ERR552915 | MDR-TB | lineage4.1.2.1;lineage4.3.4.2.1 | None |
ERR9993144 | XDR-TB | lineage2.2.1 | None |
SRR10040263 | MDR-TB | lineage2.2.1 | None |
SRR6930899 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4811286 | MDR-TB | lineage2.2.1 | cn |
ERR11488538 | MDR-TB | lineage4.3.4.2.1 | None |
SRR847775 | Pre-XDR-TB | lineage4.3.3 | za |
SRR1181371 | MDR-TB | lineage2.2.1;lineage4 | None |
ERR2516003 | MDR-TB | lineage2.2.1 | za |
SRR15316213 | HR-TB | lineage2.2.1 | None |
ERR11081794 | MDR-TB | lineage4.1.2.1 | None |
ERR9119643 | MDR-TB | lineage5.1.1 | None |
ERR5987340 | MDR-TB | lineage4.3.3 | None |
SRR6824357 | Pre-XDR-TB | lineage4.4.2 | None |
ERR551380 | MDR-TB | lineage2.2.1 | None |
SRR6824387 | MDR-TB | lineage2.2.1 | cn |
ERR11488373 | MDR-TB | lineage4.3.4.2.1 | None |
SRR1165327 | MDR-TB | lineage4.3.3 | None |
ERR8773876 | Pre-XDR-TB | lineage4.3.3 | None |
ERR13285158 | Pre-XDR-TB | lineage4.7 | None |
ERR2516498 | MDR-TB | lineage4.3.3 | nl |
SRR25207007 | MDR-TB | lineage4.5 | None |
ERR11488449 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11489046 | MDR-TB | lineage2.2.1 | None |
SRR29017562 | MDR-TB | lineage4.3.3 | None |
ERR4797621 | Pre-XDR-TB | lineage2.2.1 | in |
ERR158584 | HR-TB | lineage4.3.3 | ru |
SRR1180396 | MDR-TB | lineage2.2.1 | None |
ERR11488635 | MDR-TB | lineage4.3.4.2.1 | None |
ERR6358722 | MDR-TB | lineage4.6.1.1 | None |
ERR13273279 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None |
SRR29053131 | MDR-TB | lineage4.3.3 | None |
SAMN02350465 | MDR-TB | lineage2.2.1 | za |
ERR2984798 | MDR-TB | lineage4.3.2 | None |
SRR29274030 | MDR-TB | lineage4.3.3 | None |
SRR29772590 | MDR-TB | lineage4.3.3 | None |
SRR25207320 | Pre-XDR-TB | lineage4.2.2 | None |
SRR15316325 | HR-TB | lineage2.2.1 | None |
ERR553127 | MDR-TB | lineage2.2.1 | None |
SRR6832336 | HR-TB | lineage4.3.3 | None |
SRR18693860 | HR-TB | lineage1.2.2.2 | None |
SRR16156723 | Pre-XDR-TB | lineage4.3.3 | None |
ERR11081121 | Pre-XDR-TB | lineage4.7 | None |
ERR11081043 | Pre-XDR-TB | lineage4.1.2.1 | None |
SRR16156718 | Pre-XDR-TB | lineage4.3.3 | None |
ERR13291118 | MDR-TB | lineage4.4.2 | None |
ERR11488845 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11489032 | MDR-TB | lineage2.2.1 | None |
ERR11488643 | MDR-TB | lineage4.3.4.2.1 | None |
SRR15723174 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13583303 | HR-TB | lineage4.3.4.2 | None |
ERR11489062 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11775060 | MDR-TB | lineage4.9.1 | None |
ERR2179660 | MDR-TB | lineage4.4.2 | cn |
ERR11489028 | Pre-XDR-TB | lineage4.3.4.2.1 | None |
SAMN02350440 | Pre-XDR-TB | lineage4.3.3 | za |
ERR13191069 | MDR-TB | lineage2.2.2 | None |
SAMN02585987 | MDR-TB | lineage4.3.3 | za |
SAMN03246332 | MDR-TB | lineage2.2.1 | None |
SRR1184389 | MDR-TB | lineage4.3.3 | None |
SRR28393959 | MDR-TB | lineage2.2.1.1 | None |
ERR11252494 | MDR-TB | lineage4.3.4.2.1 | None |
ERR502958 | MDR-TB | lineage2.2.1 | None |
ERR11252569 | MDR-TB | lineage2.2.1 | None |
SRR25389475 | MDR-TB | lineage2.2.1 | None |
SRR28351295 | HR-TB | lineage2.2.1 | None |
SAMN03246351 | MDR-TB | lineage2.2.1 | cn |
SRR28239687 | HR-TB | lineage4.2.1 | None |
SRR6824433 | MDR-TB | lineage2.2.1 | cn |
SRR6824494 | MDR-TB | lineage2.2.1 | cn |
SRR6824667 | Pre-XDR-TB | lineage4.4.2 | cn |
SRR6831772 | MDR-TB | lineage4.2.1 | None |
ERR7911194 | MDR-TB | lineage2.2.1 | za |
ERR7911198 | MDR-TB | lineage4.3.3 | za |
ERR7911207 | MDR-TB | lineage4.3.3 | za |
ERR7911209 | MDR-TB | lineage4.3.3 | za |
ERR7911436 | MDR-TB | lineage2.2.1 | za |
ERR7911444 | MDR-TB | lineage4.3.3 | za |
ERR11081003 | HR-TB | lineage4.1.2.1 | None |
ERR11081955 | MDR-TB | lineage4.6.2.2 | None |
SRR21798443 | HR-TB | lineage4.2.1 | None |
ERR7737895 | MDR-TB | lineage4.3.3 | None |
SAMN02350477 | MDR-TB | lineage4.3.3 | za |
SRR11342654 | MDR-TB | lineage2.2.1 | None |
SRR12420388 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1723793 | MDR-TB | lineage2.2.1 | cn |
SRR9971097 | Pre-XDR-TB | lineage4.3.3 | None |
SRR7341648 | Pre-XDR-TB | lineage4.1.2.1 | ro |
SAMEA2535156 | MDR-TB | lineage2.2.1 | uz |
ERR9119541 | MDR-TB | lineage5.1 | None |
SRR12420276 | MDR-TB | lineage2.2.1 | None |
SRR14801937 | MDR-TB | lineage2.2.1 | None |
SRR1723917 | MDR-TB | lineage4.5 | None |
SRR1723982 | MDR-TB | lineage4.4.2 | cn |
ERR2516920 | MDR-TB | lineage4.1.2.1 | gb |
SRR9971047 | MDR-TB | lineage4.3.3 | None |
SRR18714952 | MDR-TB | lineage4.2.1 | None |
SRR25207164 | MDR-TB | lineage2.2.1 | None |
DRR130240 | HR-TB | lineage4.2.2 | None |
ERR3509862 | MDR-TB | lineage4.3.4.2.1 | None |
SRR28393387 | MDR-TB | lineage2.2.1.1 | None |
ERR4872135 | MDR-TB | lineage5.1 | None |
SRR29231535 | HR-TB | lineage4.2.2.2 | None |
ERR11488515 | MDR-TB | lineage4.3.4.2.1 | None |
SRR1723586 | MDR-TB | lineage2.2.1 | None |
DRR130150 | MDR-TB | lineage4.2.2 | None |
ERR10680057 | MDR-TB | lineage4.4.1.1 | None |
ERR10680100 | MDR-TB | lineage4.1 | None |
SRR6824295 | MDR-TB | lineage2.2.1 | cn |
SRR28393630 | MDR-TB | lineage4.1.2.1 | None |
ERR11488676 | MDR-TB | lineage4.3.4.2.1 | None |
SRR25206894 | Pre-XDR-TB | lineage2.2.1 | None |
SAMN02586022 | MDR-TB | lineage4.3.3 | za |
ERR2516589 | MDR-TB | lineage4.3.2 | pe |
ERR11488776 | MDR-TB | lineage4.3.4.2.1 | None |
SRR18715254 | MDR-TB | lineage4.2.1 | None |
SRR21277578 | Pre-XDR-TB | lineage4.5 | None |
SRR15723130 | HR-TB | lineage2.2.1 | None |
SRR833162 | MDR-TB | lineage4.3.3 | None |
ERR11488746 | Pre-XDR-TB | lineage4.3.4.2.1 | None |
SRR1167250 | MDR-TB | lineage4.3.3 | None |
SRR14782219 | HR-TB | lineage4.1.2.1 | None |
SRR25340787 | MDR-TB | lineage4.2.2.2 | None |
ERR11488917 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11488856 | MDR-TB | lineage4.3.4.2.1 | None |
SRR25207357 | Pre-XDR-TB | lineage4.2.2 | None |
ERR11488882 | MDR-TB | lineage4.3.4.2.1 | None |
SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None |
SRR15316341 | MDR-TB | lineage4.5 | None |
SRR9971041 | MDR-TB | lineage4.3.3 | None |
SAMN02586097 | MDR-TB | lineage4.3.3 | za |
ERR11081855 | MDR-TB | lineage4.2.1 | None |
SRR25206970 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25340765 | MDR-TB | lineage1.1.2 | None |
SRR9971280 | MDR-TB | lineage4.3.3 | None |
SRR924224 | Pre-XDR-TB | lineage4.3.3 | None |
ERR4872179 | MDR-TB | lineage4.6.2.2 | None |
ERR7737693 | MDR-TB | lineage4.3.3 | None |
ERR11488562 | MDR-TB | lineage4.3.4.2.1 | None |
SRR833037 | MDR-TB | lineage4.3.3 | None |
ERR126642 | HR-TB | lineage4.1.1.3 | mw |
ERR13285092 | Pre-XDR-TB | lineage4.1.2.1 | None |
SRR1047988 | Pre-XDR-TB | lineage2.2.1 | None |
ERR8975182 | MDR-TB | lineage2.2.1 | None |
ERR11488411 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11043528 | MDR-TB | lineage4.8 | None |
SRR15315933 | MDR-TB | lineage2.2.1 | None |
ERR3273207 | MDR-TB | lineage2.2.1.1 | None |
SRR833140 | MDR-TB | lineage4.3.3 | None |
SRR1184299 | MDR-TB | lineage4.3.3 | None |
SRR11342656 | MDR-TB | lineage2.2.1 | None |
DRR130195 | MDR-TB | lineage4.2.2 | None |
ERR6358869 | MDR-TB | lineage4.6.1.1 | None |
SRR1723658 | MDR-TB | lineage2.2.1 | cn |
SRR28045583 | Pre-XDR-TB | lineage4.1.1 | None |
SRR18213811 | HR-TB | lineage4.6.2.2 | None |
SRR29538933 | HR-TB | lineage4.2.1 | None |
SRR29051262 | HR-TB | lineage4.1.2.1 | None |
SRR28044944 | XDR-TB | lineage4.2.2.2 | None |
ERR4810938 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR28706614 | MDR-TB | lineage4.2.1.1 | None |
SRR24256267 | Pre-XDR-TB | lineage4.8 | None |
ERR13285022 | MDR-TB | lineage2.2.1 | None |
ERR4818502 | HR-TB | lineage4.2.2.2 | gb |
ERR4810954 | MDR-TB | lineage2.2.1 | cn |
SRR9971225 | MDR-TB | lineage4.3.3 | None |
SRR6824434 | MDR-TB | lineage4.4.2 | cn |
SRR1019134 | MDR-TB | lineage4.3.3 | None |
SAMN03246349 | MDR-TB | lineage2.2.1 | cn |
ERR553128_ERR553127_ERR553126 | MDR-TB | lineage2.2.1 | None |
SRR11567796 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2516514 | Pre-XDR-TB | lineage4.1.2 | pe |
SRR1196670 | MDR-TB | lineage4.3.3 | None |
SRR1062833 | MDR-TB | lineage4.3.3 | None |
ERR9120006 | MDR-TB | lineage4.3.3 | None |
SRR16156695 | Pre-XDR-TB | lineage4.3.3 | None |
ERR13284031 | MDR-TB | lineage2.2.1 | None |
SRR6824484 | XDR-TB | lineage4.4.2 | cn |
SRR12416843 | MDR-TB | lineage1.2.1.2.1 | None |
SRR22873602 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29081652 | MDR-TB | lineage4 | None |
ERR10680112 | MDR-TB | lineage4.1.3 | None |
SRR1140946 | MDR-TB | lineage4.3.3 | None |
ERR4822345 | MDR-TB | lineage4.4.2 | None |
ERR4831481 | Pre-XDR-TB | lineage1.1.2 | None |
ERR4811475 | HR-TB | lineage2.2.1 | cn |
ERR2516365 | MDR-TB | lineage2.2.1 | be |
ERR10680204 | MDR-TB | lineage4.1.2.1 | None |
SRR10040422 | MDR-TB | lineage2.2.1 | None |
SRR29017332 | MDR-TB | lineage4.3.2 | None |
ERR2516492 | Pre-XDR-TB | lineage4.3.3 | pe |
ERR13253355 | MDR-TB | lineage4.4.2 | None |
ERR3132296 | HR-TB | lineage4 | None |
SRR24709919 | MDR-TB | lineage2.2.1 | None |
ERR13285134 | MDR-TB | lineage4.8 | None |
ERR3287746 | HR-TB | lineage4.3.4.1 | pe |
SRR29385487 | HR-TB | lineage2.2.1 | None |
SRR11342641 | MDR-TB | lineage4.3.3 | None |
ERR5918044 | MDR-TB | lineage2.2.1 | za |
ERR2433007 | MDR-TB | lineage4.3.4.2.1 | None |
ERR3509864 | MDR-TB | lineage4.3.4.2.1 | None |
SRR25207010 | Pre-XDR-TB | lineage2.2.1 | None |
SRR21732177 | HR-TB | lineage1.2.1.2.1 | None |
ERR8773874 | Pre-XDR-TB | lineage4.3.3 | None |
SRR833067 | MDR-TB | lineage4.3.3 | None |
ERR4872149 | MDR-TB | lineage4.6.2.2 | None |
ERR4822360 | MDR-TB | lineage2.2.1 | None |
ERR4832031 | HR-TB | lineage2.2.1 | vn |
ERR11488334 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11488340 | MDR-TB | lineage4.3.4.2.1 | None |
SRR10500314 | Pre-XDR-TB | lineage1.1.2 | None |
ERR4830712 | HR-TB | lineage4.3.1 | dz |
ERR3132264 | HR-TB | lineage4.9 | None |
SRR25827638 | Pre-XDR-TB | lineage2.2.1;lineage4 | None |
ERR5987399 | MDR-TB | lineage4.3.3 | None |
ERR3509850 | MDR-TB | lineage4.3.4.2.1 | None |
ERR2099790 | MDR-TB | lineage4.1.2.1 | es |
SRR11342655 | MDR-TB | lineage2.2.1 | None |
ERR2041765 | MDR-TB | lineage4.1.2.1 | rs |
SRR16097540 | HR-TB | lineage2.2.1 | None |
ERR718313 | MDR-TB | lineage2.2.1 | th |
ERR9992827 | MDR-TB | lineage4.3.3 | None |
SRR28240166 | HR-TB | lineage4.8 | None |
ERR11773737 | Pre-XDR-TB | lineage4.3.3 | None |
SAMN02403512 | MDR-TB | lineage4.3.3 | za |
SRR1019162 | Pre-XDR-TB | lineage4.3.3 | None |
SRR1140944 | MDR-TB | lineage4.3.3 | None |
SRR6824650 | MDR-TB | lineage2.2.1 | cn |
SRR6982440 | MDR-TB | lineage4.3.4.2.1 | None |
ERR718488 | MDR-TB | lineage4.5 | th |
SRR28393347 | MDR-TB | lineage4.1.2 | None |
ERR2516654 | MDR-TB | lineage2.2.1.1 | pe |
ERR7911136 | MDR-TB | lineage2.2.1 | vn |
SRR833106 | MDR-TB | lineage4.3.3 | None |
SRR2024922 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR9971358 | MDR-TB | lineage2.2.1 | None |
ERR2706916 | MDR-TB | lineage4.6.1.2 | cd |
ERR7911073 | Pre-XDR-TB | lineage4.3.3 | za |
ERR502899 | Pre-XDR-TB | lineage2.2.1 | None |
ERR7911190 | MDR-TB | lineage4.3.3 | za |
ERR9119551 | MDR-TB | lineage4.6.2.2 | None |
ERR502957 | MDR-TB | lineage2.2.1 | None |
ERR11488709 | Pre-XDR-TB | lineage4.3.4.2.1 | None |
ERR7911443 | MDR-TB | lineage4.3.3 | za |
ERR2516422 | MDR-TB | lineage4.7 | pe |
ERR6358725 | MDR-TB | lineage4.6.1.2 | None |
SRR1180315 | MDR-TB | lineage2.2.1 | None |
SRR16156743 | Pre-XDR-TB | lineage4.3.3 | None |
ERR2516598 | Pre-XDR-TB | lineage4.1.1 | pe |
ERR4829116 | HR-TB | lineage4.2.1 | it |
SAMN02350420 | MDR-TB | lineage4.3.3 | za |
SRR11342637 | MDR-TB | lineage4.3.3 | None |
SRR12420341 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13583355 | HR-TB | lineage4.1.2.1 | None |
SRR14782218 | HR-TB | lineage4.1.2.1 | None |
SRR15465766 | MDR-TB | lineage1.1.3.1 | None |
SRR1723701 | Pre-XDR-TB | lineage2.2.1.1 | cn |
SRR12420591 | Pre-XDR-TB | lineage2.2.1 | None |
ERR550722 | HR-TB | lineage4.1.2.1 | de |
SAMEA2533899 | MDR-TB | lineage2.2.1 | uz |
SRR6824376 | MDR-TB | lineage2.2.1 | cn |
ERR13258499 | MDR-TB | lineage2.2.1 | None |
ERR13262012 | Pre-XDR-TB | lineage4.2.2.2 | None |
SRR9613552 | MDR-TB | lineage2.2.2 | None |
SRR9971053 | MDR-TB | lineage4.3.3 | None |
SRR9971374 | Pre-XDR-TB | lineage4.3.3 | None |
ERR1035206 | HR-TB | lineage4.8 | pt |
ERR10679993 | MDR-TB | lineage6.2.3 | None |
ERR2184208 | HR-TB | lineage4.1.1 | pe |
ERR3132169 | HR-TB | lineage4.1.2.1 | None |
SAMN02053741 | MDR-TB | lineage4.3.3 | za |
SRR29273731 | Pre-XDR-TB | lineage4.1.2.1 | None |
SRR11342666 | MDR-TB | lineage4.3.3 | None |
SRR11349133 | MDR-TB | lineage4.3.3 | None |
SRR1172801 | XDR-TB | lineage4.3.3 | None |
SRR28393316 | MDR-TB | lineage4 | None |
SRR28393315 | MDR-TB | lineage4.3.3 | None |
ERR13249162 | HR-TB | lineage2.2.1 | None |
ERR3794501 | MDR-TB | lineage2.2.1 | None |
SAMN03246632 | MDR-TB | lineage4.5 | cn |
ERR9119877 | Pre-XDR-TB | lineage4.3.3 | None |
SRR23310824 | MDR-TB | lineage2.2.1 | None |
SRR1172843 | MDR-TB | lineage4.3.3 | None |
ERR2516464 | MDR-TB | lineage4.1.2.1 | pe |
SRR26937001 | MDR-TB | lineage2.2.1 | None |
SRR18665471 | MDR-TB | lineage4.1.2.1 | None |
ERR10680176 | MDR-TB | lineage4.1.2.1 | None |
ERR10680203 | MDR-TB | lineage6.2.2 | None |
ERR4809188 | MDR-TB | lineage2.2.1 | za |
SRR1144805 | Pre-XDR-TB | lineage2.2.1 | None |
SRR15316177 | HR-TB | lineage2.2.1.1 | None |
SRR16156731 | Pre-XDR-TB | lineage4.3.3 | None |
SRR1173485 | HR-TB | lineage4.3.3 | None |
SRR8651591 | MDR-TB | lineage2.2.1.1 | cn |
SRR13583446 | HR-TB | lineage4.1.2 | None |
ERR2515993 | HR-TB | lineage4.1.2.1 | za |
ERR9120007 | MDR-TB | lineage4.3.3 | None |
ERR3509849 | HR-TB | lineage4.3.4.2.1 | None |
ERR4822354 | MDR-TB | lineage4.2.2 | None |
ERR2515286 | Pre-XDR-TB | lineage4.3.3 | za |
SAMN02350486 | Pre-XDR-TB | lineage4.3.3 | za |
ERR4872065 | MDR-TB | lineage4.1.2 | None |
ERR11488553 | Pre-XDR-TB | lineage4.3.4.2.1 | None |
SRR10305776 | HR-TB | lineage2.2.1 | None |
SRR1172858 | MDR-TB | lineage4.3.3 | None |
SRR924233 | Pre-XDR-TB | lineage4.3.3 | None |
SRR25515102 | MDR-TB | lineage2.2.1 | None |
ERR5865913 | MDR-TB | lineage4.2.1 | None |
ERR6358868 | MDR-TB | lineage4.6.1.1 | None |
SRR20632795 | Pre-XDR-TB | lineage2.2.1 | None |
SRR19276612 | HR-TB | lineage4.1.1 | None |
SRR21276914 | MDR-TB | lineage2.2.1 | None |
ERR11043389 | MDR-TB | lineage4.7 | None |
SAMN01925657 | Pre-XDR-TB | lineage4.3.3 | None |
SRR25515377 | MDR-TB | lineage2.2.1 | None |
ERR10680021 | MDR-TB | lineage6.2.2 | None |
SRR1173000 | MDR-TB | lineage4.3.3 | None |
SRR29096121 | HR-TB | lineage4.4.2 | None |
SRR11349194 | MDR-TB | lineage4.3.3 | None |
ERR11488500 | MDR-TB | lineage4.3.4.2.1 | None |
SRR1181356 | MDR-TB | lineage2.2.1 | None |
SAMN03246450 | MDR-TB | lineage2.2.1 | cn |
ERR2145524 | MDR-TB | lineage4.2.2.2 | None |
ERR13284799 | MDR-TB | lineage4.2.1 | None |
SRR15506889 | MDR-TB | lineage1.1.3.1 | None |
ERR1035100 | Pre-XDR-TB | lineage2.2.1.1 | vn |
ERR234577 | HR-TB | lineage4.2.1 | ru |
SRR14807637 | MDR-TB | lineage2.2.1 | None |
SRR10808440 | HR-TB | lineage4.1.1 | None |
SRR10305828 | MDR-TB | lineage2.2.1 | None |
ERR11489004 | MDR-TB | lineage2.2.1 | None |
SRR6824304 | MDR-TB | lineage2.2.1;lineage4 | cn |
ERR13298139 | MDR-TB | lineage4.4.2 | None |
SRR6930929 | HR-TB | lineage2.2.2 | None |
DRR130162 | MDR-TB | lineage2.2.1 | None |
SRR29772462 | MDR-TB | lineage2.2.1 | None |
ERR11488962 | MDR-TB | lineage4.3.4.2.1 | None |
ERR13273328 | MDR-TB | lineage2.2.1 | None |
ERR11252445 | MDR-TB | lineage2.2.1 | None |
SRR960978 | MDR-TB | lineage2.2.1 | cn |
SRR1723719 | MDR-TB | lineage2.2.1 | None |
ERR551381 | MDR-TB | lineage2.2.1 | None |
SRR10315458 | MDR-TB | lineage2.2.1;lineage4.3.3 | None |
SRR29050875 | HR-TB | lineage4.1.2 | None |
ERR4813649 | HR-TB | lineage4.1.2.1 | None |
ERR2516069 | MDR-TB | lineage4.3.3 | za |
SRR16156753 | Pre-XDR-TB | lineage4.3.3 | None |
SRR12420647 | MDR-TB | lineage2.2.1 | None |
SRR1723714 | MDR-TB | lineage2.2.1 | cn |
SRR15316075 | MDR-TB | lineage2.2.1.2 | None |
ERR13286209 | MDR-TB | lineage4.3.3 | None |
SRR9971336 | Pre-XDR-TB | lineage4.3.3 | None |
SRR1723585 | MDR-TB | lineage2.2.1 | None |
SRR1723607 | MDR-TB | lineage2.2.1 | None |
SRR1196587 | MDR-TB | lineage4.3.3 | None |
SRR6832059 | HR-TB | lineage4.2.1 | None |
SAMN02586050 | MDR-TB | lineage4.3.3 | za |
DRR130115 | MDR-TB | lineage4.4.2 | None |
SRR5073900 | HR-TB | lineage2.2.1 | vn |
SRR1196754 | MDR-TB | lineage4.3.3 | None |
ERR11488496 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11044862 | HR-TB | lineage4.2.1 | None |
SRR5067682 | HR-TB | lineage2.2.1 | vn |
ERR11081138 | MDR-TB | lineage4.8 | None |
ERR13266123 | Pre-XDR-TB | lineage4.2.2.2 | None |
SRR11342667 | MDR-TB | lineage4.3.3 | None |
ERR13260462 | HR-TB | lineage4.3.3 | None |
ERR13261258 | Pre-XDR-TB | lineage4.2.2.2 | None |
SRR1011476 | MDR-TB | lineage4.3.3 | None |
SRR10305625 | MDR-TB | lineage2.2.1 | None |
SRR1173574 | MDR-TB | lineage4.3.3 | None |
ERR13284955 | MDR-TB | lineage4.7 | None |
ERR13266638 | HR-TB | lineage2.2.1 | None |
ERR11488807 | MDR-TB | lineage4.3.4.2.1 | None |
ERR13284728 | MDR-TB | lineage4.1.2.1 | None |
SRR9971182 | MDR-TB | lineage4.3.3 | None |
ERR11488772 | MDR-TB | lineage4.3.4.2.1 | None |
SRR1019140 | MDR-TB | lineage2.2.1 | None |
ERR4809168 | MDR-TB | lineage4.3.3 | za |
ERR11252568 | MDR-TB | lineage4.3.4.2.1 | None |
ERR13284950 | MDR-TB | lineage4.8 | None |
SRR30180322 | MDR-TB | lineage2.2.1 | None |
ERR11489063 | Pre-XDR-TB | lineage4.3.4.2.1 | None |
SRR20969995 | MDR-TB | lineage4.4.2 | None |
ERR13291072 | MDR-TB | lineage2.2.1 | None |
ERR13261391 | Pre-XDR-TB | lineage4.3.3 | None |
ERR8773555 | MDR-TB | lineage4.2.2.2 | None |
ERR7737719 | MDR-TB | lineage2.2.1 | None |
SRR16156761 | Pre-XDR-TB | lineage4.3.3 | None |
ERR4811325 | Pre-XDR-TB | lineage4.2.2 | cn |
ERR11081950 | MDR-TB | lineage4.8 | None |
SRR1175351 | MDR-TB | lineage4.3.3 | None |
DRR130199 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11488452 | MDR-TB | lineage4.3.4.2.1 | None |
SRR11567787 | MDR-TB | lineage2.2.1 | None |
SRR5153717 | Pre-XDR-TB | lineage4.1.2.1 | None |
ERR2516555 | MDR-TB | lineage4.1 | nl |
SRR29055693 | MDR-TB | lineage2.2.1 | None |
ERR7737888 | MDR-TB | lineage4.3.3 | None |
SRR1173403 | MDR-TB | lineage4.3.3 | None |
SRR21576538 | MDR-TB | lineage2.2.1 | None |
SRR11567786 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4553408 | MDR-TB | lineage4.3 | None |
SRR1173107 | MDR-TB | lineage4.3.3 | None |
SRR18665457 | MDR-TB | lineage4.1.2.1 | None |
SRR11342653 | MDR-TB | lineage2.2.1 | None |
SRR21576613 | MDR-TB | lineage4.2.2 | None |
ERR11488773 | MDR-TB | lineage4.3.4.2.1 | None |
ERR11488383 | MDR-TB | lineage4.3.4.2.1 | None |
ERR7737758 | MDR-TB | lineage4.3.4.2.1 | None |
SRR10315609 | Pre-XDR-TB | lineage4.3.3 | None |
SRR6824456 | MDR-TB | lineage2.2.1 | cn |
SRR11342636 | MDR-TB | lineage4.3.3 | None |
ERR2179680 | Pre-XDR-TB | lineage4.4.2 | cn |
ERR11775618 | MDR-TB | lineage4.3.3 | None |
ERR13285029 | MDR-TB | lineage4.8 | None |
ERR351912 | HR-TB | lineage4.6.2.2 | None |
ERR11081999 | HR-TB | lineage4.1.2.1 | None |
SRR6930931 | HR-TB | lineage2.2.1 | None |
SRR1723811 | MDR-TB | lineage2.2.1 | cn |
ERR3509857 | MDR-TB | lineage4.3.4.2.1 | None |
SRR21277848 | MDR-TB | lineage2.2.1.2 | None |
SRR847782 | Pre-XDR-TB | lineage4.3.3 | za |
SRR1175307 | XDR-TB | lineage4.3.3 | None |
SRR1062854 | Pre-XDR-TB | lineage4.3.3 | None |
ERR11488620 | MDR-TB | lineage4.3.4.2.1 | None |
SRR21576570 | MDR-TB | lineage2.2.1 | None |
SRR15368990 | Pre-XDR-TB | lineage4.5 | None |
ERR11488532 | MDR-TB | lineage4.3.4.2.1 | None |
SRR25206889 | Pre-XDR-TB | lineage2.1 | None |
ERR11488440 | MDR-TB | lineage4.3.4.2.1 | None |
SRR6855833 | HR-TB | lineage4.1.2.1 | None |
SRR29772541 | MDR-TB | lineage1.2.2.2 | None |
ERR11082840 | HR-TB | lineage4.1.2.1 | None |
SRR14802156 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1196686 | MDR-TB | lineage4.3.3 | None |
ERR3509865 | HR-TB | lineage4.3.4.2.1 | None |
SRR13583367 | MDR-TB | lineage4.4.1.1 | None |
SRR1140955 | Pre-XDR-TB | lineage4.3.3 | None |
SRR29056125 | MDR-TB | lineage4.8 | None |
ERR4808883 | MDR-TB | lineage2.2.1 | za |
SAMN02053768 | MDR-TB | lineage4.3.3 | za |
ERR13250187 | MDR-TB | lineage1.2.1.2.1 | None |
SRR1173106 | HR-TB | lineage4.3.3 | None |
ERR1213843 | HR-TB | lineage4 | kr |
SRR6824336 | MDR-TB | lineage4.5 | cn |
SRR29681461 | HR-TB | lineage4.1.2.1 | None |
SRR29772545 | MDR-TB | lineage2.2.1 | None |
ERR13288983 | MDR-TB | lineage4.3.3 | None |
ERR13284943 | MDR-TB | lineage4.8 | None |
ERR11081269 | MDR-TB | lineage4.7 | None |
SRR29056347 | MDR-TB | lineage2.2.1 | None |
SAMN02350434 | MDR-TB | lineage4.3.3 | za |
ERR13254143 | MDR-TB | lineage4.2.2 | None |
ERR2179666 | MDR-TB | lineage4.5 | cn |
SRR29274082 | Pre-XDR-TB | lineage4.3.3 | None |
ERR13286115 | MDR-TB | lineage4.3.3 | None |
ERR9119577 | MDR-TB | lineage4.6.2.2 | None |
ERR4872251 | MDR-TB | lineage5.1.1 | None |
SRR671837 | MDR-TB | lineage2.2.1 | cn |
SRR1723671 | MDR-TB | lineage2.2.1 | cn |
SRR21279442 | HR-TB | lineage2.2.1.1 | None |
SRR1175039 | HR-TB | lineage4.3.3 | None |
SRR9971170 | MDR-TB | lineage4.3.3 | None |
ERR13288943 | XDR-TB | lineage4.3.3 | None |
ERR8976013 | MDR-TB | lineage4.3.3 | None |
SRR6930907 | MDR-TB | lineage2.2.1 | None |
ERR11488512 | MDR-TB | lineage4.3.4.2.1 | None |
ERR9993093 | MDR-TB | lineage4.3.3 | None |
SRR28240124 | HR-TB | lineage4 | None |
ERR11488523 | MDR-TB | lineage4.3.4.2.1 | None |
ERR4796975 | MDR-TB | lineage4.4.1.1 | in |
SRR11662536 | MDR-TB | lineage2.2.1 | None |
SRR13583473 | HR-TB | lineage4.1.2.1 | None |
SRR1011461 | MDR-TB | lineage4.3.3 | None |
SRR1723605 | MDR-TB | lineage2.2.1 | None |
ERR13260010 | Pre-XDR-TB | lineage2.2.2 | None |
ERR11488994 | MDR-TB | lineage4.3.4.2.1 | None |
SRR29050634 | HR-TB | lineage4.1.2.1 | None |
ERR8773553 | MDR-TB | lineage4.2.2.2 | None |
ERR11488400 | MDR-TB | lineage4.3.4.2.1 | None |
SRR29050886 | MDR-TB | lineage4.4.1.1 | None |
ERR13266796 | Pre-XDR-TB | lineage4.2.2.2 | None |
SRR7765063 | Pre-XDR-TB | lineage4.8 | None |
SRR29539406 | HR-TB | lineage2.2.1;lineage4.2.1 | None |
ERR221556 | HR-TB | lineage4.3.4.2.1 | mw |
SRR9971214 | MDR-TB | lineage2.2.1 | None |
SRR17657932 | HR-TB | lineage4 | None |
SRR1723568 | MDR-TB | lineage2.2.1 | cn |
SAMN02586075 | XDR-TB | lineage4.3.3 | None |
ERR11488450 | MDR-TB | lineage4.3.4.2.1 | None |
SRR833149 | MDR-TB | lineage4.3.3 | None |
SRR12416846 | MDR-TB | lineage4.7 | None |
ERR2516199 | MDR-TB | lineage4.1.2.1 | be |
SRR10315611 | Pre-XDR-TB | lineage4.3.3 | None |
ERR5987411 | Pre-XDR-TB | lineage4.3.3 | None |
ERR551381_ERR551380 | MDR-TB | lineage2.2.1 | None |
ERR13290910 | MDR-TB | lineage4.2.2 | None |
SRR10869188 | Pre-XDR-TB | lineage4.3.3 | None |
SRR18002991 | Pre-XDR-TB | lineage2.2.1 | None |
SRR21663286 | HR-TB | lineage4.2.2 | None |
SRR1019170 | MDR-TB | lineage4.3.3 | None |
ERR11488737 | Pre-XDR-TB | lineage4.3.4.2.1 | None |
SRR6824479 | MDR-TB | lineage4.5 | cn |
ERR9993143 | XDR-TB | lineage2.2.1 | None |
SAMN02586014 | MDR-TB | lineage4.3.3 | za |
SRR25207253 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4831897 | HR-TB | lineage2.2.1 | vn |
SRR10315612 | Pre-XDR-TB | lineage4.3.3 | None |
SAMN02585979 | MDR-TB | lineage2.2.1 | za |
SRR22873607 | XDR-TB | lineage2.2.1 | None |
SRR29341463 | HR-TB | lineage4.4.1.1 | None |
SRR1184319 | MDR-TB | lineage4.3.3 | None |