Rv2428 - c.-52C>T
Drug resistance types
0 Sensitive
0 RR-TB
29 HR-TB
116 MDR-TB
33 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2.2 | 4 |
| lineage4.3.3 | 35 |
| lineage2.2.1 | 68 |
| lineage6.2.2 | 1 |
| lineage4.5 | 7 |
| lineage4.1.2 | 1 |
| lineage4.4.2 | 9 |
| lineage4 | 1 |
| lineage4.2.2 | 2 |
| lineage2.2.1.1 | 7 |
| lineage4.6.1.2 | 3 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.2.1 | 10 |
| lineage4.3.4.1 | 1 |
| lineage4.7 | 2 |
| lineage4.1.1 | 2 |
| lineage5.1.1 | 2 |
| lineage2.2 | 2 |
| lineage4.2.1 | 2 |
| lineage4.3.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.6.1.1 | 4 |
| lineage4.8 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.9 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 179 |
Geographic prevalence
Country level data for this variant is available for 149 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4797441 | MDR-TB | lineage4.2.2.2 | in | ERR7911073 | Pre-XDR-TB | lineage4.3.3 | za | ERR8975722 | MDR-TB | lineage4.3.3 | None | ERR7911436 | MDR-TB | lineage2.2.1 | za | ERR553000 | MDR-TB | lineage6.2.2 | None | SAMN02350465 | MDR-TB | lineage2.2.1 | za | SRR6824479 | MDR-TB | lineage4.5 | cn | ERR2516514 | Pre-XDR-TB | lineage4.1.2 | pe | ERR4831897 | HR-TB | lineage2.2.1 | vn | ERR7911198 | MDR-TB | lineage4.3.3 | za | SRR1723466 | HR-TB | lineage2.2.1 | cn | SRR6824357 | Pre-XDR-TB | lineage4.4.2 | None | SRR6824433 | MDR-TB | lineage2.2.1 | cn | ERR1213843 | HR-TB | lineage4 | kr | SAMN02586014 | MDR-TB | lineage4.3.3 | za | SRR671744 | MDR-TB | lineage2.2.1 | cn | SAMN02585979 | MDR-TB | lineage2.2.1 | za | ERR4811325 | Pre-XDR-TB | lineage4.2.2 | cn | SRR5067682 | HR-TB | lineage2.2.1 | vn | ERR2516654 | MDR-TB | lineage2.2.1.1 | pe | ERR1199101 | MDR-TB | lineage4.6.1.2 | cd | SAMN02398702 | Pre-XDR-TB | lineage2.2.1 | kr | SRR6824387 | MDR-TB | lineage2.2.1 | cn | ERR2433007 | MDR-TB | lineage4.3.4.2.1 | None | ERR553062 | HR-TB | lineage4.1.2.1 | de | ERR3287746 | HR-TB | lineage4.3.4.1 | pe | ERR6358850 | MDR-TB | lineage4.7 | None | SAMN02403513 | MDR-TB | lineage4.3.3 | za | ERR2516498 | MDR-TB | lineage4.3.3 | nl | SAMN02350477 | MDR-TB | lineage4.3.3 | za | SAMN02403512 | MDR-TB | lineage4.3.3 | za | ERR2516598 | Pre-XDR-TB | lineage4.1.1 | pe | SRR5073723 | HR-TB | lineage2.2.1 | vn | ERR4809168 | MDR-TB | lineage4.3.3 | za | SAMN03246351 | MDR-TB | lineage2.2.1 | cn | ERR2516422 | MDR-TB | lineage4.7 | pe | SRR847782 | Pre-XDR-TB | lineage4.3.3 | za | ERR2179776 | HR-TB | lineage4.5 | cn | SRR6824374 | MDR-TB | lineage2.2.1 | cn | SRR6824484 | XDR-TB | lineage4.4.2 | cn | SRR1723714 | MDR-TB | lineage2.2.1 | cn | ERR7911443 | MDR-TB | lineage4.3.3 | za | ERR4832031 | HR-TB | lineage2.2.1 | vn | ERR4822360 | MDR-TB | lineage2.2.1 | None | ERR2099790 | MDR-TB | lineage4.1.2.1 | es | ERR502899 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024922 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8651577 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2179660 | MDR-TB | lineage4.4.2 | cn | ERR3170404 | MDR-TB | lineage5.1.1 | gh | SRR23310824 | MDR-TB | lineage2.2 | None | ERR2179680 | Pre-XDR-TB | lineage4.4.2 | cn | ERR2516920 | MDR-TB | lineage4.1.2.1 | gb | ERR7737719 | MDR-TB | lineage2.2 | None | SRR1723586_SRR1723585 | MDR-TB | lineage2.2.1 | None | ERR2041765 | MDR-TB | lineage4.1.2.1 | rs | ERR234577 | HR-TB | lineage4.2.1 | ru | SRR15723130 | HR-TB | lineage2.2.1 | None | ERR5918044 | MDR-TB | lineage2.2.1 | za | SAMN02586022 | MDR-TB | lineage4.3.3 | za | ERR4829116 | HR-TB | lineage4.2.1 | it | ERR4797621 | Pre-XDR-TB | lineage2.2.1 | in | ERR2515286 | Pre-XDR-TB | lineage4.3.3 | za | ERR2516365 | MDR-TB | lineage2.2.1 | be | ERR2516727 | MDR-TB | lineage2.2.1.1 | None | ERR7911444 | MDR-TB | lineage4.3.3 | za | ERR550722 | HR-TB | lineage4.1.2.1 | de | SRR2101443 | HR-TB | lineage2.2.1 | None | ERR8975795 | MDR-TB | lineage2.2.1 | None | SRR1723549 | MDR-TB | lineage2.2.1 | cn | SRR6824465 | MDR-TB | lineage2.2.1 | cn | SRR6824651 | Pre-XDR-TB | lineage2.2.1.1 | cn | SAMN02053741 | MDR-TB | lineage4.3.3 | za | SRR671784 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02053746 | MDR-TB | lineage4.3.3 | za | SRR6824360 | MDR-TB | lineage4.5 | cn | SRR1723793 | MDR-TB | lineage2.2.1 | cn | ERR2516069 | MDR-TB | lineage4.3.3 | za | SAMN02586075 | Pre-XDR-TB | lineage4.3.3 | None | ERR4831002 | Pre-XDR-TB | lineage4.2.2.2 | np | SRR6824559 | MDR-TB | lineage2.2.1 | cn | ERR2515993 | HR-TB | lineage4.1.2.1 | za | ERR4822354 | MDR-TB | lineage4.2.2 | None | ERR4830712 | HR-TB | lineage4.3.1 | dz | SRR6824376 | MDR-TB | lineage2.2.1 | cn | ERR7911496 | MDR-TB | lineage1.1.1 | vn | ERR6358705 | MDR-TB | lineage4.6.1.1 | None | SRR671758 | MDR-TB | lineage2.2.1.1 | cn | SAMN02053768 | MDR-TB | lineage4.3.3 | za | ERR4829907 | HR-TB | lineage4.1.2.1 | it | ERR1035206 | HR-TB | lineage4.8 | pt | ERR2516492 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4811475 | HR-TB | lineage2.2.1 | cn | ERR4808883 | MDR-TB | lineage2.2.1 | za | ERR126642 | HR-TB | lineage4.1.1.3 | mw | ERR4800452 | Pre-XDR-TB | lineage2.2.1 | in | ERR6358722 | MDR-TB | lineage4.6.1.1 | None | SAMN02586097 | MDR-TB | lineage4.3.3 | za | SRR6824412 | MDR-TB | lineage2.2.1 | cn | ERR2516464 | MDR-TB | lineage4.1.2.1 | pe | SRR5073900 | HR-TB | lineage2.2.1 | vn | ERR4796599 | Pre-XDR-TB | lineage2.2.1 | in | ERR8975182 | MDR-TB | lineage2.2.1 | None | ERR7911136 | MDR-TB | lineage2.2.1 | vn | SRR8651591 | MDR-TB | lineage2.2.1.1 | cn | SAMN02350460 | MDR-TB | lineage4.3.3 | za | ERR4809188 | MDR-TB | lineage2.2.1 | za | ERR502957 | MDR-TB | lineage2.2.1 | None | SAMEA2535156 | MDR-TB | lineage2.2.1 | uz | SAMN03246450 | MDR-TB | lineage2.2.1 | cn | ERR4810954 | MDR-TB | lineage2.2.1 | cn | ERR4810981 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824545 | MDR-TB | lineage2.2.1 | cn | ERR718488 | MDR-TB | lineage4.5 | th | ERR4813791 | HR-TB | lineage4.3.4.2 | br | ERR718313 | MDR-TB | lineage2.2.1 | th | ERR6358869 | MDR-TB | lineage4.6.1.1 | None | ERR7911209 | MDR-TB | lineage4.3.3 | za | ERR8975914 | MDR-TB | lineage4.3.3 | None | ERR4810938 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4818502 | HR-TB | lineage4.2.2.2 | gb | SRR7341648 | Pre-XDR-TB | lineage4.1.2.1 | ro | ERR2516003 | MDR-TB | lineage2.2.1 | za | SAMN02350486 | Pre-XDR-TB | lineage4.3.3 | za | ERR8976013 | MDR-TB | lineage4.3.3 | None | SRR6824494 | MDR-TB | lineage2.2.1 | cn | SRR6824434 | MDR-TB | lineage4.4.2 | cn | SAMN03246349 | MDR-TB | lineage2.2.1 | cn | ERR7911194 | MDR-TB | lineage2.2.1 | za | SAMN02350434 | MDR-TB | lineage4.3.3 | za | ERR2706916 | MDR-TB | lineage4.6.1.2 | cd | SRR6824336 | MDR-TB | lineage4.5 | cn | ERR2516589 | MDR-TB | lineage4.3.2 | pe | SRR1723568 | MDR-TB | lineage2.2.1 | cn | ERR6358725 | MDR-TB | lineage4.6.1.2 | None | ERR2179666 | MDR-TB | lineage4.5 | cn | SRR960978 | MDR-TB | lineage2.2.1 | cn | ERR4810642 | HR-TB | lineage2.2.1 | cn | ERR7911190 | MDR-TB | lineage4.3.3 | za | ERR3170488 | MDR-TB | lineage5.1.1 | gh | ERR4822345 | MDR-TB | lineage4.4.2 | None | ERR4831481 | Pre-XDR-TB | lineage1.1.2 | None | SRR1723658 | MDR-TB | lineage2.2.1 | cn | SRR671837 | MDR-TB | lineage2.2.1 | cn | SRR1723671 | MDR-TB | lineage2.2.1 | cn | SRR1723982 | MDR-TB | lineage4.4.2 | cn | ERR6358868 | MDR-TB | lineage4.6.1.1 | None | SRR6824650 | MDR-TB | lineage2.2.1 | cn | ERR2433003 | MDR-TB | lineage4.3.4.2.1 | br | ERR4811286 | MDR-TB | lineage2.2.1 | cn | ERR1035100 | Pre-XDR-TB | lineage2.2.1.1 | vn | ERR4831006 | Pre-XDR-TB | lineage4.2.2.2 | np | ERR4796975 | MDR-TB | lineage4.4.1.1 | in | SRR847775 | Pre-XDR-TB | lineage4.3.3 | za | SRR6824456 | MDR-TB | lineage2.2.1 | cn | SRR1723701 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR502958 | MDR-TB | lineage2.2.1 | None | SAMN02586050 | MDR-TB | lineage4.3.3 | za | SAMN02350440 | Pre-XDR-TB | lineage4.3.3 | za | SRR2101249 | HR-TB | lineage4.6.2.2 | None | ERR2516199 | MDR-TB | lineage4.1.2.1 | be | SRR1723980 | Pre-XDR-TB | lineage4.4.2 | cn | ERR221556 | HR-TB | lineage4.3.4.2.1 | mw | SRR671727 | MDR-TB | lineage2.2.1 | cn | SRR6824667 | Pre-XDR-TB | lineage4.4.2 | cn | ERR2184208 | HR-TB | lineage4.1.1 | pe | SRR1723811 | MDR-TB | lineage2.2.1 | cn | ERR158584 | HR-TB | lineage4.3.3 | ru | ERR7911207 | MDR-TB | lineage4.3.3 | za | SAMN02350420 | MDR-TB | lineage4.3.3 | za | SRR6824646 | MDR-TB | lineage4.5;lineage2.2.1 | cn | SRR6824304 | MDR-TB | lineage4;lineage2.2.1 | cn | SAMN03246632 | MDR-TB | lineage4.5 | cn | SRR8651662 | Pre-XDR-TB | lineage2.2.1 | None | ERR212025 | HR-TB | lineage4.9 | mw | SRR6824295 | MDR-TB | lineage2.2.1 | cn | SAMEA2533899 | MDR-TB | lineage2.2.1 | uz | ERR2516555 | MDR-TB | lineage4.1 | nl | SAMN02585987 | MDR-TB | lineage4.3.3 | za |
|---|
