Rv2428 - c.-52C>T


Drug resistance types
0 Sensitive 0 RR-TB 80 HR-TB 343 MDR-TB 103 Pre-XDR-TB 4 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2 2
lineage5.1.1 4
lineage4 5
lineage4.1.2.1 29
lineage4.5 12
lineage4.4.2 13
lineage2.2.1 140
lineage4.1.2 5
lineage4.3.3 128
lineage4.1 2
lineage4.7 6
lineage4.2.2 8
lineage4.1.1 4
lineage2.2.1.1 10
lineage4.3.2 3
lineage4.4.1.1 2
lineage4.2.2.2 8
lineage1.1.2 5
lineage4.2.1 13
lineage4.6.2.2 9
lineage4.9 4
lineage5 2
lineage4.3.4.2.1 65
lineage2.2.2 2
lineage4.2.1;lineage2.2.1 1
lineage4.3.1 1
lineage4.3.4.1 1
lineage4.8 9
lineage2.2.1;lineage2.1 1
lineage6.2.2 3
lineage4.1.3 1
lineage4.1.1.3 2
lineage4.3.4.2.1;lineage2.2.1 1
lineage4.3.4.2 2
lineage4.6.1.1 4
lineage4.6.1.2 3
lineage4.3.3;lineage2.2.1 1
lineage4.3 2
lineage1.1.1 3
lineage1.2.1.2.1 2
lineage4;lineage1.1.1 1
lineage2.2.1.2 2
lineage1.1.3.1 3
lineage1.2.2.2 1
lineage2.1 1
lineage4;lineage2.2 2
lineage4;lineage2.2.1 1
lineage4.5;lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 530
Geographic prevalence
Country level data for this variant is available for 149 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR23310824 MDR-TB lineage2.2 None
ERR3170488 MDR-TB lineage5.1.1 gh
ERR3170404 MDR-TB lineage5.1.1 gh
ERR1213843 HR-TB lineage4 kr
ERR2099790 MDR-TB lineage4.1.2.1 es
ERR2179666 MDR-TB lineage4.5 cn
ERR2179776 HR-TB lineage4.5 cn
ERR2179680 Pre-XDR-TB lineage4.4.2 cn
ERR2516920 MDR-TB lineage4.1.2.1 gb
ERR2179660 MDR-TB lineage4.4.2 cn
ERR4822360 MDR-TB lineage2.2.1 None
ERR4822345 MDR-TB lineage4.4.2 None
ERR2516514 Pre-XDR-TB lineage4.1.2 pe
ERR2516365 MDR-TB lineage2.2.1 be
ERR2516199 MDR-TB lineage4.1.2.1 be
ERR2516498 MDR-TB lineage4.3.3 nl
ERR2516555 MDR-TB lineage4.1 nl
ERR2516464 MDR-TB lineage4.1.2.1 pe
ERR2516422 MDR-TB lineage4.7 pe
ERR4822354 MDR-TB lineage4.2.2 None
ERR2516492 Pre-XDR-TB lineage4.3.3 pe
ERR2516598 Pre-XDR-TB lineage4.1.1 pe
ERR2516654 MDR-TB lineage2.2.1.1 pe
ERR2516589 MDR-TB lineage4.3.2 pe
ERR4796599 Pre-XDR-TB lineage2.2.1 in
ERR4810938 Pre-XDR-TB lineage2.2.1 cn
ERR4796975 MDR-TB lineage4.4.1.1 in
ERR4810981 Pre-XDR-TB lineage2.2.1 cn
ERR4811286 MDR-TB lineage2.2.1 cn
ERR4810954 MDR-TB lineage2.2.1 cn
SRR8651577 Pre-XDR-TB lineage2.2.1 cn
ERR4810642 HR-TB lineage2.2.1 cn
SRR8651591 MDR-TB lineage2.2.1.1 cn
ERR4800452 Pre-XDR-TB lineage2.2.1 in
ERR4797621 Pre-XDR-TB lineage2.2.1 in
ERR4811325 Pre-XDR-TB lineage4.2.2 cn
ERR4797441 MDR-TB lineage4.2.2.2 in
ERR4811475 HR-TB lineage2.2.1 cn
ERR4829907 HR-TB lineage4.1.2.1 it
ERR4831002 Pre-XDR-TB lineage4.2.2.2 np
ERR4831006 Pre-XDR-TB lineage4.2.2.2 np
ERR3077943 MDR-TB lineage1.1.2 None
ERR4829116 HR-TB lineage4.2.1 it
ERR4872149 MDR-TB lineage4.6.2.2 None
ERR3132296 HR-TB lineage4 None
ERR4872065 MDR-TB lineage4.1.2 None
ERR3132264 HR-TB lineage4.9 None
ERR4872135 MDR-TB lineage5 None
SRR6832386 HR-TB lineage4.2.1 None
ERR4872179 MDR-TB lineage4.6.2.2 None
ERR4872251 MDR-TB lineage5.1.1 None
SRR6832059 HR-TB lineage4.2.1 None
SRR6832336 HR-TB lineage4.3.3 None
SRR6982440 MDR-TB lineage4.3.4.2.1 None
SRR6832468 MDR-TB lineage4.2.1 None
SRR6930907 MDR-TB lineage2.2.1 None
SRR6930899 Pre-XDR-TB lineage2.2.1 None
SRR6930931 HR-TB lineage2.2.1 None
SRR6930929 HR-TB lineage2.2.2 None
SRR6855833 HR-TB lineage4.1.2.1 None
SRR6832857 HR-TB lineage4.2.1;lineage2.2.1 None
SRR6824357 Pre-XDR-TB lineage4.4.2 None
ERR2184208 HR-TB lineage4.1.1 pe
ERR4830712 HR-TB lineage4.3.1 dz
ERR3287746 HR-TB lineage4.3.4.1 pe
ERR3132169 HR-TB lineage4.1.2.1 None
ERR2984798 MDR-TB lineage4.3.2 None
SRR6831772 MDR-TB lineage4.2.1 None
SRR924224 Pre-XDR-TB lineage4.3.3 None
SRR9971358 MDR-TB lineage2.2.1 None
SRR924233 Pre-XDR-TB lineage4.3.3 None
SRR9971280 MDR-TB lineage4.3.3 None
ERR11488620 MDR-TB lineage4.3.4.2.1 None
ERR11488384 MDR-TB lineage2.2.1 None
ERR11488996 MDR-TB lineage4.3.4.2.1 None
ERR11488334 MDR-TB lineage4.3.4.2.1 None
SRR9971336 XDR-TB lineage4.3.3 None
ERR11489032 MDR-TB lineage2.2.1 None
SRR9613552 MDR-TB lineage2.2.2 None
SRR833037 MDR-TB lineage4.3.3 None
SRR833106 MDR-TB lineage4.3.3 None
SRR833067 MDR-TB lineage4.3.3 None
SRR9971374 Pre-XDR-TB lineage4.3.3 None
ERR11488449 MDR-TB lineage4.3.4.2.1 None
SRR833162 MDR-TB lineage4.3.3 None
SRR833149 MDR-TB lineage4.3.3 None
SRR833140 MDR-TB lineage4.3.3 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR11488684 MDR-TB lineage4.3.4.2.1 None
ERR11488635 MDR-TB lineage4.3.4.2.1 None
ERR11488496 MDR-TB lineage4.3.4.2.1 None
ERR11488575 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488655 MDR-TB lineage4.3.4.2.1 None
SRR9971097 Pre-XDR-TB lineage4.3.3 None
SRR9971047 MDR-TB lineage4.3.3 None
SRR9971053 MDR-TB lineage4.3.3 None
ERR11488706 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488746 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488772 MDR-TB lineage4.3.4.2.1 None
ERR11488837 MDR-TB lineage4.3.4.2.1 None
SRR8651662 Pre-XDR-TB lineage2.2.1 None
SRR9971214 MDR-TB lineage2.2.1 None
SRR9971170 MDR-TB lineage4.3.3 None
SRR7765063 Pre-XDR-TB lineage4.8 None
SRR9971173 MDR-TB lineage4.3.3 None
SRR9971182 MDR-TB lineage4.3.3 None
SRR9971195 MDR-TB lineage4.3.3 None
DRR130162 MDR-TB lineage2.2.1 None
SRR921502 Pre-XDR-TB lineage2.2.1;lineage2.1 None
SRR9971225 MDR-TB lineage4.3.3 None
ERR11489004 MDR-TB lineage2.2.1 None
DRR130115 MDR-TB lineage4.4.2 None
DRR130195 MDR-TB lineage4.2.2 None
DRR130240 HR-TB lineage4.2.2 None
DRR130199 Pre-XDR-TB lineage2.2.1 None
ERR11488737 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488845 MDR-TB lineage4.3.4.2.1 None
ERR11489046 MDR-TB lineage2.2.1 None
DRR188784 HR-TB lineage2.2.1 None
ERR11488768 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488356 MDR-TB lineage2.2.1 None
ERR11488340 MDR-TB lineage4.3.4.2.1 None
ERR11488400 MDR-TB lineage4.3.4.2.1 None
ERR11488365 MDR-TB lineage2.2.1 None
ERR11488373 MDR-TB lineage4.3.4.2.1 None
ERR11488383 MDR-TB lineage4.3.4.2.1 None
ERR11488411 MDR-TB lineage4.3.4.2.1 None
ERR11489063 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488450 MDR-TB lineage4.3.4.2.1 None
ERR11488452 MDR-TB lineage4.3.4.2.1 None
ERR11488500 MDR-TB lineage4.3.4.2.1 None
ERR11488917 MDR-TB lineage4.3.4.2.1 None
ERR11488931 XDR-TB lineage4.3.4.2.1 None
ERR11488474 MDR-TB lineage4.3.4.2.1 None
ERR11488532 MDR-TB lineage4.3.4.2.1 None
ERR11488523 MDR-TB lineage4.3.4.2.1 None
ERR4818502 HR-TB lineage4.2.2.2 gb
ERR11488512 MDR-TB lineage4.3.4.2.1 None
ERR11488515 MDR-TB lineage4.3.4.2.1 None
ERR11488553 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488562 MDR-TB lineage4.3.4.2.1 None
ERR11488544 MDR-TB lineage4.3.4.2.1 None
ERR11488538 MDR-TB lineage4.3.4.2.1 None
ERR10680203 MDR-TB lineage6.2.2 None
ERR11488776 MDR-TB lineage4.3.4.2.1 None
ERR11488773 MDR-TB lineage4.3.4.2.1 None
ERR11488782 MDR-TB lineage4.3.4.2.1 None
ERR11488676 MDR-TB lineage4.3.4.2.1 None
ERR10680176 MDR-TB lineage4.1.2.1 None
ERR10680204 MDR-TB lineage4.1.2.1 None
ERR11488779 MDR-TB lineage4.3.4.2.1 None
ERR11488643 MDR-TB lineage4.3.4.2.1 None
ERR11488856 MDR-TB lineage4.3.4.2.1 None
ERR10680100 MDR-TB lineage4.1 None
ERR10680112 MDR-TB lineage4.1.3 None
ERR10680166 MDR-TB lineage6.2.2 None
ERR10680220 MDR-TB lineage4.1.1.3 None
ERR11043389 MDR-TB lineage4.7 None
ERR10748418 MDR-TB lineage2.2.1 None
ERR11488691 MDR-TB lineage4.3.4.2.1 None
ERR11043528 MDR-TB lineage4.8 None
ERR11044862 HR-TB lineage4.2.1 None
ERR11488709 Pre-XDR-TB lineage4.3.4.2.1 None
ERR1213920 HR-TB lineage4.1.2 None
ERR11488370 MDR-TB lineage4.3.4.2.1 None
ERR3509862 MDR-TB lineage4.3.4.2.1 None
ERR11488440 MDR-TB lineage4.3.4.2.1 None
ERR3273207 MDR-TB lineage2.2.1.1 None
ERR3509849 HR-TB lineage4.3.4.2.1 None
ERR3509855 MDR-TB lineage4.3.4.2.1 None
ERR3509850 MDR-TB lineage4.3.4.2.1 None
ERR3509864 MDR-TB lineage4.3.4.2.1 None
ERR3509858 MDR-TB lineage4.3.4.2.1;lineage2.2.1 None
ERR3794501 MDR-TB lineage2.2.1 None
ERR3509865 HR-TB lineage4.3.4.2.1 None
ERR3509857 MDR-TB lineage4.3.4.2.1 None
ERR351912 HR-TB lineage4.6.2.2 None
ERR4553408 MDR-TB lineage4.3.2 None
ERR386844 HR-TB lineage4.6.2.2 None
ERR11488994 MDR-TB lineage4.3.4.2.1 None
ERR11488882 MDR-TB lineage4.3.4.2.1 None
ERR2516069 MDR-TB lineage4.3.3 za
ERR11489028 Pre-XDR-TB lineage4.3.4.2.1 None
ERR234577 HR-TB lineage4.2.1 ru
ERR2516003 MDR-TB lineage2.2.1 za
ERR4832031 HR-TB lineage2.2.1 vn
ERR4831897 HR-TB lineage2.2.1 vn
ERR2515286 Pre-XDR-TB lineage4.3.3 za
ERR4808883 MDR-TB lineage2.2.1 za
ERR4809168 MDR-TB lineage4.3.3 za
ERR4831481 Pre-XDR-TB lineage1.1.2 None
ERR4809188 MDR-TB lineage2.2.1 za
ERR8976013 MDR-TB lineage4.3.3 None
ERR5918044 MDR-TB lineage2.2.1 za
ERR12268385 HR-TB lineage4.8 None
ERR8975914 MDR-TB lineage4.3.3 None
ERR8975795 MDR-TB lineage2.2.1 None
ERR5987399 MDR-TB lineage4.3.3 None
ERR8975722 MDR-TB lineage4.3.3 None
ERR4813791 HR-TB lineage4.3.4.2 br
ERR2515993 HR-TB lineage4.1.2.1 za
ERR5865913 MDR-TB lineage4.2.1 None
ERR5987340 MDR-TB lineage4.3.3 None
ERR6358722 MDR-TB lineage4.6.1.1 None
ERR6358725 MDR-TB lineage4.6.1.2 None
ERR5987411 Pre-XDR-TB lineage4.3.3 None
ERR6358705 MDR-TB lineage4.6.1.1 None
ERR6358850 MDR-TB lineage4.7 None
ERR7737719 MDR-TB lineage2.2.1 None
ERR6358868 MDR-TB lineage4.6.1.1 None
ERR2145524 MDR-TB lineage4.2.2.2 None
SRR27241220 MDR-TB lineage2.2.1 None
ERR7737693 MDR-TB lineage4.3.3 None
ERR6358869 MDR-TB lineage4.6.1.1 None
SRR11662258 HR-TB lineage4.5 None
ERR7737762 MDR-TB lineage4.3.3 None
ERR7737888 MDR-TB lineage4.3.3 None
ERR7737758 MDR-TB lineage4.3.4.2.1 None
ERR7737895 MDR-TB lineage4.3.3 None
ERR8975182 MDR-TB lineage2.2 None
ERR8773555 MDR-TB lineage4.2.2.2 None
SRR11662536 MDR-TB lineage2.2.1 None
ERR8773553 MDR-TB lineage4.2.2.2 None
ERR8773874 Pre-XDR-TB lineage4.3.3 None
ERR8773876 Pre-XDR-TB lineage4.3.3 None
ERR9119471 MDR-TB lineage4.1.2 None
ERR9119541 MDR-TB lineage5 None
ERR9119577 MDR-TB lineage4.6.2.2 None
ERR9119551 MDR-TB lineage4.6.2.2 None
SRR1019134 MDR-TB lineage4.3.3 None
ERR9119643 MDR-TB lineage5.1.1 None
ERR9119877 Pre-XDR-TB lineage4.3.3 None
ERR9120007 MDR-TB lineage4.3.3 None
ERR9992827 MDR-TB lineage4.3.3 None
ERR9993144 Pre-XDR-TB lineage2.2.1 None
SRR1011476 MDR-TB lineage4.3.3 None
ERR9120006 MDR-TB lineage4.3.3 None
ERR9993093 MDR-TB lineage4.3.3 None
ERR9993143 Pre-XDR-TB lineage2.2.1 None
SRR1011461 MDR-TB lineage4.3.3 None
SRR1011483 Pre-XDR-TB lineage4.3.3 None
SRR1019140 MDR-TB lineage2.2.1 None
SRR1019170 MDR-TB lineage4.3.3 None
SRR10305776 HR-TB lineage2.2.1 None
SRR1019162 Pre-XDR-TB lineage4.3.3 None
SRR10305625 MDR-TB lineage2.2.1 None
SRR10305828 MDR-TB lineage2.2.1 None
SRR10315458 MDR-TB lineage4.3.3;lineage2.2.1 None
SRR10315611 Pre-XDR-TB lineage4.3.3 None
SRR10315612 Pre-XDR-TB lineage4.3.3 None
SRR10315609 Pre-XDR-TB lineage4.3.3 None
SRR11342637 MDR-TB lineage4.3.3 None
SRR10500314 Pre-XDR-TB lineage1.1.2 None
SRR1062847 MDR-TB lineage4.3.3 None
SRR10869188 Pre-XDR-TB lineage4.3.3 None
SRR10315701 MDR-TB lineage4.3.3 None
SRR1062833 MDR-TB lineage4.3.3 None
SRR1062854 Pre-XDR-TB lineage4.3.3 None
SRR10808440 HR-TB lineage4.1.1 None
SRR1047988 Pre-XDR-TB lineage2.2.1 None
SRR11342654 MDR-TB lineage2.2.1 None
SRR11342667 MDR-TB lineage4.3.3 None
SRR11342641 MDR-TB lineage4.3.3 None
SRR11342656 MDR-TB lineage2.2.1 None
SRR11349133 MDR-TB lineage4.3.3 None
SRR1144805 Pre-XDR-TB lineage2.2.1 None
SRR11349194 MDR-TB lineage4.3.3 None
SRR1140946 MDR-TB lineage4.3.3 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR11349205 MDR-TB lineage2.2.1 None
SRR11349204 MDR-TB lineage2.2.1 None
SRR1140901 MDR-TB lineage2.2.1 None
SRR1140944 MDR-TB lineage4.3.3 None
SRR1140955 Pre-XDR-TB lineage4.3.3 None
SRR11567787 MDR-TB lineage2.2.1 None
SRR11567786 Pre-XDR-TB lineage2.2.1 None
SRR1165277 MDR-TB lineage4.3.3 None
SRR11567796 Pre-XDR-TB lineage2.2.1 None
SRR1165327 MDR-TB lineage4.3.3 None
SRR1172843 MDR-TB lineage4.3.3 None
SRR1167285 MDR-TB lineage4.3.3 None
SRR1167250 MDR-TB lineage4.3.3 None
SRR1172801 Pre-XDR-TB lineage4.3.3 None
SRR1172858 MDR-TB lineage4.3.3 None
SRR1173000 MDR-TB lineage4.3.3 None
SRR1173156 MDR-TB lineage4.3.3 None
SRR1173055 MDR-TB lineage2.2.1 None
SRR1173106 MDR-TB lineage4.3.3 None
SRR1173107 MDR-TB lineage4.3.3 None
SRR1173532 MDR-TB lineage4.3.3 None
SRR1173485 MDR-TB lineage4.3.3 None
SRR1173403 MDR-TB lineage4.3.3 None
SRR1175057 MDR-TB lineage4.3 None
SRR1173574 MDR-TB lineage4.3.3 None
SRR1175039 MDR-TB lineage4.3 None
SRR1175047 MDR-TB lineage4 None
SRR1175307 Pre-XDR-TB lineage4.3.3 None
SRR1184299 MDR-TB lineage4.3.3 None
SRR1175351 MDR-TB lineage4.3.3 None
SRR1180315 MDR-TB lineage2.2.1 None
SRR1180396 MDR-TB lineage2.2.1 None
SRR1181356 MDR-TB lineage2.2.1 None
SRR1181371 MDR-TB lineage2.2.1 None
SRR1184304 MDR-TB lineage4.3.3 None
SRR1184319 MDR-TB lineage4.3.3 None
SRR12199399 HR-TB lineage1.1.1 None
SRR1184389 MDR-TB lineage4.3.3 None
SRR1196492 MDR-TB lineage4.3.3 None
SRR1196587 MDR-TB lineage4.3.3 None
SRR1196670 MDR-TB lineage4.3.3 None
SRR1196754 MDR-TB lineage4.3.3 None
SRR1184321 MDR-TB lineage4.3.3 None
SRR1196478 MDR-TB lineage4.9 None
SRR1196686 MDR-TB lineage4.3.3 None
SRR13583303 HR-TB lineage4.3.4.2 None
SRR12416843 MDR-TB lineage1.2.1.2.1 None
SRR12416846 MDR-TB lineage4.7 None
SRR13423613 Pre-XDR-TB lineage4.4.2 None
SRR12199439 HR-TB lineage4;lineage1.1.1 None
SRR13423542 Pre-XDR-TB lineage2.2.1 None
SRR13583465 HR-TB lineage4.1.2.1 None
SRR13583355 HR-TB lineage4.1.2.1 None
SRR13583446 HR-TB lineage4.1.2 None
SRR13583367 MDR-TB lineage4.4.1.1 None
SRR14802156 Pre-XDR-TB lineage2.2.1 None
SRR14801937 MDR-TB lineage2.2.1 None
SRR13583473 HR-TB lineage4.1.2.1 None
SRR14782218 HR-TB lineage4.1.2.1 None
SRR14782219 HR-TB lineage4.1.2.1 None
SRR14807570 MDR-TB lineage2.2.1 None
SRR15315933 MDR-TB lineage2.2.1 None
SRR14807637 MDR-TB lineage2.2.1 None
SRR15315838 MDR-TB lineage4.4.2 None
SRR15316019 MDR-TB lineage2.2.1 None
SRR15316075 MDR-TB lineage2.2.1.2 None
SRR15316325 HR-TB lineage2.2.1 None
SRR15316213 HR-TB lineage2.2.1 None
SRR15316177 HR-TB lineage2.2.1.1 None
SRR15465766 MDR-TB lineage1.1.3.1 None
SRR15364434 Pre-XDR-TB lineage4.9 None
SRR15506889 MDR-TB lineage1.1.3.1 None
SRR15316341 MDR-TB lineage4.5 None
SRR15368990 Pre-XDR-TB lineage4.5 None
SRR16097540 HR-TB lineage2.2.1 None
SRR15723130 HR-TB lineage2.2.1 None
SRR15723174 Pre-XDR-TB lineage2.2.1 None
SRR16156718 Pre-XDR-TB lineage4.3.3 None
SRR16156695 Pre-XDR-TB lineage4.3.3 None
SRR16156743 Pre-XDR-TB lineage4.3.3 None
SRR16156723 Pre-XDR-TB lineage4.3.3 None
SRR16156731 Pre-XDR-TB lineage4.3.3 None
SRR16157039 MDR-TB lineage4 None
SRR16156753 Pre-XDR-TB lineage4.3.3 None
SRR16156761 Pre-XDR-TB lineage4.3.3 None
SRR16370411 MDR-TB lineage4.3.3 None
SRR11662306 MDR-TB lineage2.2.1 None
SRR16370469 MDR-TB lineage2.2.1 None
SRR18665471 MDR-TB lineage4.1.2.1 None
SRR18002991 Pre-XDR-TB lineage2.2.1 None
SRR18213811 HR-TB lineage4.6.2.2 None
SRR18665457 MDR-TB lineage4.1.2.1 None
SRR18693860 HR-TB lineage1.2.2.2 None
SRR18714952 MDR-TB lineage4.2.1 None
SRR18714845 HR-TB lineage2.2.1 None
SRR19276612 HR-TB lineage4.1.1 None
SRR18715254 MDR-TB lineage4.2.1 None
SRR19276621 Pre-XDR-TB lineage4.8 None
SRR20632795 Pre-XDR-TB lineage2.2.1 None
SRR25206889 Pre-XDR-TB lineage2.1 None
SRR20632818 Pre-XDR-TB lineage2.2.1 None
ERR11488807 MDR-TB lineage4.3.4.2.1 None
SRR20632802 Pre-XDR-TB lineage2.2.1 None
SRR20969995 MDR-TB lineage4.4.2 None
ERR11489062 MDR-TB lineage4.3.4.2.1 None
ERR11488962 MDR-TB lineage4.3.4.2.1 None
SRR25206894 Pre-XDR-TB lineage2.2.1 None
SRR25206970 Pre-XDR-TB lineage2.2.1 None
SRR25207357 Pre-XDR-TB lineage4.2.2 None
SRR25207007 MDR-TB lineage4.5 None
SRR25207320 Pre-XDR-TB lineage4.2.2 None
SRR17657932 HR-TB lineage4 None
SRR25340765 MDR-TB lineage1.1.2 None
SRR25340760 MDR-TB lineage1.1.2 None
SRR21276914 MDR-TB lineage2.2.1 None
SRR25340787 MDR-TB lineage4.2.2.2 None
SRR2101443 HR-TB lineage2.2.1 None
SRR21277578 Pre-XDR-TB lineage4.5 None
SRR21576538 MDR-TB lineage2.2.1 None
SRR21277848 MDR-TB lineage2.2.1.2 None
SRR21279442 HR-TB lineage2.2.1.1 None
SRR21576570 MDR-TB lineage2.2.1 None
ERR11081121 Pre-XDR-TB lineage4.7 None
SRR21576613 MDR-TB lineage4.2.2 None
SRR21663286 HR-TB lineage4.2.2 None
SRR21714052 HR-TB lineage1.1.3.1 None
ERR11080964 MDR-TB lineage4.8 None
ERR11081003 HR-TB lineage4.1.2.1 None
ERR11081043 Pre-XDR-TB lineage4.1.2.1 None
ERR11081138 MDR-TB lineage4.8 None
ERR11081269 MDR-TB lineage4.7 None
ERR11081855 MDR-TB lineage4.2.1 None
ERR11081794 MDR-TB lineage4.1.2.1 None
ERR11081955 MDR-TB lineage4.6.2.2 None
ERR11081999 HR-TB lineage4.1.2.1 None
ERR11081950 MDR-TB lineage4.8 None
SRR25207072 MDR-TB lineage2.2.1 None
ERR11082011 MDR-TB lineage2.2.1 None
ERR11082840 HR-TB lineage4.1.2.1 None
ERR9806739 MDR-TB lineage4;lineage2.2 None
ERR10610302 MDR-TB lineage4;lineage2.2 None
SRR22873607 XDR-TB lineage2.2.1 None
SRR22873602 Pre-XDR-TB lineage2.2.1 None
SRR21798443 HR-TB lineage4.2.1 None
SRR24256267 Pre-XDR-TB lineage4.8 None
SRR21732177 HR-TB lineage1.2.1.2.1 None
SRR26399579 HR-TB lineage2.2.1 None
SRR26937001 MDR-TB lineage2.2.1 None
SRR27107235 HR-TB lineage4.1.2.1 None
SRR25389475 MDR-TB lineage2.2.1 None
SRR25207253 Pre-XDR-TB lineage2.2.1 None
SRR26937120 MDR-TB lineage1.1.1 None
SRR25515377 MDR-TB lineage2.2.1 None
SRR24709919 MDR-TB lineage2.2.1 None
SAMN03246450 MDR-TB lineage2.2.1 cn
SRR1723671 MDR-TB lineage2.2.1 cn
SRR1723811 MDR-TB lineage2.2.1 cn
SRR1723568 MDR-TB lineage2.2.1 cn
SRR1723982 MDR-TB lineage4.4.2 cn
SRR671727 MDR-TB lineage2.2.1 cn
SAMN03246632 MDR-TB lineage4.5 cn
SRR1723980 Pre-XDR-TB lineage4.4.2 cn
SRR1723658 MDR-TB lineage2.2.1 cn
SAMN03246349 MDR-TB lineage2.2.1 cn
SRR3105741 Pre-XDR-TB lineage4.2.1 None
SRR6824494 MDR-TB lineage2.2.1 cn
SRR671758 MDR-TB lineage2.2.1.1 cn
SRR671744 MDR-TB lineage2.2.1 cn
SRR6824412 MDR-TB lineage2.2.1 cn
SRR6824304 MDR-TB lineage4;lineage2.2.1 cn
SRR6824651 Pre-XDR-TB lineage2.2.1.1 cn
SRR671784 Pre-XDR-TB lineage2.2.1 cn
SRR6824295 MDR-TB lineage2.2.1 cn
SAMN02586075 Pre-XDR-TB lineage4.3.3 None
SRR6824650 MDR-TB lineage2.2.1 cn
SRR6824465 MDR-TB lineage2.2.1 cn
SRR6824376 MDR-TB lineage2.2.1 cn
SRR6824374 MDR-TB lineage2.2.1 cn
SRR6824387 MDR-TB lineage2.2.1 cn
SRR6824434 MDR-TB lineage4.4.2 cn
SRR6824433 MDR-TB lineage2.2.1 cn
SRR6824559 MDR-TB lineage2.2.1 cn
SRR6824336 MDR-TB lineage4.5 cn
SRR6824456 MDR-TB lineage2.2.1 cn
ERR2041765 MDR-TB lineage4.1.2.1 rs
SRR6824484 XDR-TB lineage4.4.2 cn
SRR6824360 MDR-TB lineage4.5 cn
SRR6824646 MDR-TB lineage4.5;lineage2.2.1 cn
SRR6824479 MDR-TB lineage4.5 cn
SRR6824667 Pre-XDR-TB lineage4.4.2 cn
SRR6824545 MDR-TB lineage2.2.1 cn
SRR960978 MDR-TB lineage2.2.1 cn
SRR671837 MDR-TB lineage2.2.1 cn
SRR1723466 HR-TB lineage2.2.1 cn
SAMN02586097 MDR-TB lineage4.3.3 za
SRR1723549 MDR-TB lineage2.2.1 cn
SRR1723714 MDR-TB lineage2.2.1 cn
SRR1723701 Pre-XDR-TB lineage2.2.1.1 cn
SRR1723793 MDR-TB lineage2.2.1 cn
SAMN02350477 MDR-TB lineage4.3.3 za
SAMN02585979 MDR-TB lineage2.2.1 za
ERR4813649 HR-TB lineage4.1.2.1 None
SAMN03246351 MDR-TB lineage2.2.1 cn
SAMN02350486 Pre-XDR-TB lineage4.3.3 za
ERR126642 HR-TB lineage4.1.1.3 mw
ERR221556 HR-TB lineage4.3.4.2.1 mw
ERR1035206 HR-TB lineage4.8 pt
SAMN02586022 MDR-TB lineage4.3.3 za
SAMN02586050 MDR-TB lineage4.3.3 za
SRR847775 Pre-XDR-TB lineage4.3.3 za
SAMN02053741 MDR-TB lineage4.3.3 za
SAMN02053768 MDR-TB lineage4.3.3 za
ERR1035100 Pre-XDR-TB lineage2.2.1.1 vn
SAMN02053746 MDR-TB lineage4.3.3 za
SAMN02350420 MDR-TB lineage4.3.3 za
ERR158584 HR-TB lineage4.3.3 ru
ERR212025 HR-TB lineage4.9 mw
SAMN02350440 Pre-XDR-TB lineage4.3.3 za
SAMN02350465 MDR-TB lineage2.2.1 za
ERR2433007 MDR-TB lineage4.3.4.2.1 None
ERR718313 MDR-TB lineage2.2.1 th
SRR5073723 HR-TB lineage2.2.1 vn
SRR5067682 HR-TB lineage2.2.1 vn
SRR5073900 HR-TB lineage2.2.1 vn
ERR718488 MDR-TB lineage4.5 th
ERR502899 Pre-XDR-TB lineage2.2.1 None
SAMN02585987 MDR-TB lineage4.3.3 za
ERR502958 MDR-TB lineage2.2.1 None
ERR502957 MDR-TB lineage2.2.1 None
ERR7911190 MDR-TB lineage4.3.3 za
SRR5153717 Pre-XDR-TB lineage4.1.2.1 None
ERR1199101 MDR-TB lineage4.6.1.2 cd
ERR7911136 MDR-TB lineage2.2.1 vn
ERR553062 HR-TB lineage4.1.2.1 de
ERR7911496 MDR-TB lineage1.1.1 vn
ERR7911073 Pre-XDR-TB lineage4.3.3 za
ERR7911198 MDR-TB lineage4.3.3 za
ERR7911194 MDR-TB lineage2.2.1 za
ERR7911207 MDR-TB lineage4.3.3 za
ERR7911444 MDR-TB lineage4.3.3 za
SRR847782 Pre-XDR-TB lineage4.3.3 za
ERR7911209 MDR-TB lineage4.3.3 za
ERR7911436 MDR-TB lineage2.2.1 za
ERR7911443 MDR-TB lineage4.3.3 za
SAMN02350434 MDR-TB lineage4.3.3 za
ERR553000 MDR-TB lineage6.2.2 None
SAMN02350460 MDR-TB lineage4.3.3 za
SAMN02586014 MDR-TB lineage4.3.3 za
ERR550722 HR-TB lineage4.1.2.1 de
SRR2024922 Pre-XDR-TB lineage2.2.1 cn
ERR2516727 MDR-TB lineage2.2.1.1 None
SAMN02398702 Pre-XDR-TB lineage2.2.1 kr
SAMN02403513 MDR-TB lineage4.3.3 za
SAMN02403512 MDR-TB lineage4.3.3 za
SAMEA2533899 MDR-TB lineage2.2.1 uz
ERR2706916 MDR-TB lineage4.6.1.2 cd
SRR2101249 HR-TB lineage4.6.2.2 None
SRR1723586_SRR1723585 MDR-TB lineage2.2.1 None
SAMEA2535156 MDR-TB lineage2.2.1 uz
ERR2433003 MDR-TB lineage4.3.4.2.1 br
SRR7341648 Pre-XDR-TB lineage4.1.2.1 ro