Rv2428 - c.-52C>T


Drug resistance types
0 Sensitive 0 RR-TB 99 HR-TB 395 MDR-TB 115 Pre-XDR-TB 10 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.3.3 137
lineage4.3.2 3
lineage4.3.4.2.1 64
lineage4.5 14
lineage2.2.1 183
lineage4.1.2.1 35
lineage4.2.2 9
lineage4.6.1.2 3
lineage4.1.2 6
lineage4.2.1 17
lineage4.6.2.2 9
lineage4.8 13
lineage5.1.1 4
lineage1.1.2 5
lineage2.2.1.1 11
lineage4.6.1.1 4
lineage4.3.4.2 4
lineage4.4.2 16
lineage4.1.1 5
lineage1.2.1.2.1 3
lineage2.2.1;lineage4.3.3 1
lineage4.4.1.1 3
lineage4.7 8
lineage4.2.2.2 13
lineage4 6
lineage4.9 3
lineage2.2.1;lineage4.5 1
lineage4.3.1 1
lineage1.1.1 3
lineage2.1;lineage2.2.1 1
lineage4.1.1.3 3
lineage2.2.1;lineage4.3.4.2.1 1
lineage4.2.1.1 1
lineage2.2.2 3
lineage2.2.1.2 1
lineage2.1 1
lineage4.3.4.1 1
lineage1.2.2.2 2
lineage6.2.2 4
lineage1.1.3.1 3
lineage4.1.2.1;lineage4.3.4.2.1 1
lineage2.2.1;lineage4 2
lineage4.1.3 1
lineage4.1 2
lineage4.3 1
lineage2.2.1;lineage4.2.1 2
lineage5.1 2
lineage2.2.1;lineage4.2.1.1 1
lineage6.2.3 1
lineage4.9.1 1
spoligotype Counts
spoligotype Count
None 619
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SAMN02586022 MDR-TB lineage4.3.3 za
ERR2516589 MDR-TB lineage4.3.2 pe
ERR11488776 MDR-TB lineage4.3.4.2.1 None
SRR21277578 Pre-XDR-TB lineage4.5 None
SRR15723130 HR-TB lineage2.2.1 None
SRR28394010 MDR-TB lineage4.3.3 None
SRR26937001 MDR-TB lineage2.2.1 None
ERR4809188 MDR-TB lineage2.2.1 za
SRR1167250 MDR-TB lineage4.3.3 None
SRR12420310 MDR-TB lineage2.2.1 None
SRR21691105 HR-TB lineage2.2.1 None
SRR29051327 HR-TB lineage4.1.2.1 None
ERR11488856 MDR-TB lineage4.3.4.2.1 None
SRR25207357 Pre-XDR-TB lineage4.2.2 None
ERR11488882 MDR-TB lineage4.3.4.2.1 None
SRR15316341 MDR-TB lineage4.5 None
SRR671784 Pre-XDR-TB lineage2.2.1 cn
ERR550722 HR-TB lineage4.1.2.1 de
SRR1173156 MDR-TB lineage4.3.3 None
SRR25206970 Pre-XDR-TB lineage2.2.1 None
ERR1199101 MDR-TB lineage4.6.1.2 cd
SRR11342640 MDR-TB lineage4.3.3 None
DRR188784 HR-TB lineage2.2.1 None
ERR9120007 MDR-TB lineage4.3.3 None
ERR2515286 Pre-XDR-TB lineage4.3.3 za
SAMN02350486 Pre-XDR-TB lineage4.3.3 za
ERR4872065 MDR-TB lineage4.1.2 None
SRR1172858 MDR-TB lineage4.3.3 None
ERR5865913 MDR-TB lineage4.2.1 None
SRR29055487 HR-TB lineage2.2.1 None
ERR7737762 MDR-TB lineage4.3.3 None
ERR7911443 MDR-TB lineage4.3.3 za
SRR9971280 MDR-TB lineage4.3.3 None
ERR4872179 MDR-TB lineage4.6.2.2 None
SRR671727 MDR-TB lineage2.2.1 cn
ERR9119471 MDR-TB lineage4.1.2 None
SRR29681461 HR-TB lineage4.1.2.1 None
ERR13284963 MDR-TB lineage4.8 None
ERR12268385 HR-TB lineage4.8 None
ERR13285092 Pre-XDR-TB lineage4.1.2.1 None
ERR11488706 Pre-XDR-TB lineage4.3.4.2.1 None
SRR10315701 MDR-TB lineage4.3.3 None
SRR1047988 Pre-XDR-TB lineage2.2.1 None
ERR3170488 MDR-TB lineage5.1.1 gh
SRR25340760 MDR-TB lineage1.1.2 None
ERR3273207 MDR-TB lineage2.2.1.1 None
SRR833140 MDR-TB lineage4.3.3 None
SRR11349204 MDR-TB lineage2.2.1 None
ERR6358869 MDR-TB lineage4.6.1.1 None
SRR16370469 MDR-TB lineage2.2.1 None
SRR3105741 Pre-XDR-TB lineage4.2.1 None
ERR4813791 HR-TB lineage4.3.4.2 br
SRR10040263 MDR-TB lineage2.2.1 None
SRR6930899 Pre-XDR-TB lineage2.2.1 None
ERR4811286 MDR-TB lineage2.2.1 cn
SRR24256267 Pre-XDR-TB lineage4.8 None
SRR9971225 MDR-TB lineage4.3.3 None
SRR6824434 MDR-TB lineage4.4.2 cn
ERR2516003 MDR-TB lineage2.2.1 za
SRR15316213 HR-TB lineage2.2.1 None
ERR13291118 MDR-TB lineage4.4.2 None
ERR11081794 MDR-TB lineage4.1.2.1 None
ERR1035100 Pre-XDR-TB lineage2.2.1.1 vn
SAMN03246349 MDR-TB lineage2.2.1 cn
ERR7911209 MDR-TB lineage4.3.3 za
SRR10808440 HR-TB lineage4.1.1 None
ERR9120006 MDR-TB lineage4.3.3 None
ERR7911194 MDR-TB lineage2.2.1 za
ERR9119643 MDR-TB lineage5.1.1 None
DRR130162 MDR-TB lineage2.2.1 None
SAMN02350434 MDR-TB lineage4.3.3 za
SRR12416843 MDR-TB lineage1.2.1.2.1 None
ERR2179666 MDR-TB lineage4.5 cn
ERR13286115 MDR-TB lineage4.3.3 None
SRR960978 MDR-TB lineage2.2.1 cn
ERR553062 HR-TB lineage4.1.2.1 de
SRR10315458 MDR-TB lineage2.2.1;lineage4.3.3 None
SAMEA2533899 MDR-TB lineage2.2.1 uz
ERR4813649 HR-TB lineage4.1.2.1 None
ERR7737888 MDR-TB lineage4.3.3 None
SRR9971170 MDR-TB lineage4.3.3 None
ERR8976013 MDR-TB lineage4.3.3 None
SRR21576613 MDR-TB lineage4.2.2 None
ERR11488773 MDR-TB lineage4.3.4.2.1 None
ERR4796975 MDR-TB lineage4.4.1.1 in
SRR13583473 HR-TB lineage4.1.2.1 None
SRR12420647 MDR-TB lineage2.2.1 None
ERR11044862 HR-TB lineage4.2.1 None
ERR13284955 MDR-TB lineage4.7 None
ERR8773553 MDR-TB lineage4.2.2.2 None
ERR13250187 MDR-TB lineage1.2.1.2.1 None
ERR11488400 MDR-TB lineage4.3.4.2.1 None
SRR1723811 MDR-TB lineage2.2.1 cn
SRR9971214 MDR-TB lineage2.2.1 None
SRR1011476 MDR-TB lineage4.3.3 None
SRR10305625 MDR-TB lineage2.2.1 None
SRR1173574 MDR-TB lineage4.3.3 None
SRR17657932 HR-TB lineage4 None
ERR11488450 MDR-TB lineage4.3.4.2.1 None
ERR7911207 MDR-TB lineage4.3.3 za
ERR7911073 Pre-XDR-TB lineage4.3.3 za
SRR6855833 HR-TB lineage4.1.2.1 None
SRR10315611 Pre-XDR-TB lineage4.3.3 None
ERR11082840 HR-TB lineage4.1.2.1 None
ERR13284799 MDR-TB lineage4.2.1 None
ERR11488772 MDR-TB lineage4.3.4.2.1 None
SRR14802156 Pre-XDR-TB lineage2.2.1 None
ERR4809168 MDR-TB lineage4.3.3 za
ERR11252568 MDR-TB lineage4.3.4.2.1 None
SRR20969995 MDR-TB lineage4.4.2 None
ERR11488737 Pre-XDR-TB lineage4.3.4.2.1 None
SAMN02586014 MDR-TB lineage4.3.3 za
SRR25207253 Pre-XDR-TB lineage2.2.1 None
ERR3509865 HR-TB lineage4.3.4.2.1 None
ERR3132264 HR-TB lineage4.9 None
ERR8773555 MDR-TB lineage4.2.2.2 None
SAMN02585979 MDR-TB lineage2.2.1 za
SRR1184319 MDR-TB lineage4.3.3 None
ERR11080964 MDR-TB lineage4.8 None
SRR6832468 MDR-TB lineage4.2.1 None
SRR1184304 MDR-TB lineage4.3.3 None
ERR11488691 MDR-TB lineage4.3.4.2.1 None
ERR11489046 MDR-TB lineage2.2.1 None
ERR4797621 Pre-XDR-TB lineage2.2.1 in
SRR5073723 HR-TB lineage2.2.1 vn
SRR14807570 MDR-TB lineage2.2.1 None
ERR2433007 MDR-TB lineage4.3.4.2.1 None
ERR3509864 MDR-TB lineage4.3.4.2.1 None
SAMN02350465 MDR-TB lineage2.2.1 za
SRR6824360 MDR-TB lineage4.5 cn
SRR6824559 MDR-TB lineage2.2.1 cn
SRR6824646 MDR-TB lineage2.2.1;lineage4.5 cn
SRR1196492 MDR-TB lineage4.3.3 None
SRR1140901 MDR-TB lineage2.2.1 None
SRR12420471 MDR-TB lineage2.2.1 None
ERR11081121 Pre-XDR-TB lineage4.7 None
ERR11488643 MDR-TB lineage4.3.4.2.1 None
SRR13583303 HR-TB lineage4.3.4.2 None
SRR7341648 Pre-XDR-TB lineage4.1.2.1 ro
ERR4822360 MDR-TB lineage2.2.1 None
ERR4832031 HR-TB lineage2.2.1 vn
ERR4830712 HR-TB lineage4.3.1 dz
SRR20632818 Pre-XDR-TB lineage2.2.1 None
SRR26937120 MDR-TB lineage1.1.1 None
ERR3509850 MDR-TB lineage4.3.4.2.1 None
SRR18715254 MDR-TB lineage4.2.1 None
ERR386844 HR-TB lineage4.6.2.2 None
SRR19276621 Pre-XDR-TB lineage4.8 None
SRR12420601 MDR-TB lineage2.2.1 None
SRR1144805 Pre-XDR-TB lineage2.2.1 None
SRR833162 MDR-TB lineage4.3.3 None
ERR11488746 Pre-XDR-TB lineage4.3.4.2.1 None
SRR25340787 MDR-TB lineage4.2.2.2 None
SRR27107235 HR-TB lineage4.1.2.1 None
ERR11488917 MDR-TB lineage4.3.4.2.1 None
SRR6824465 MDR-TB lineage2.2.1 cn
SRR29017332 MDR-TB lineage4.3.2 None
SRR16156731 Pre-XDR-TB lineage4.3.3 None
SRR1173485 HR-TB lineage4.3.3 None
ERR13261258 Pre-XDR-TB lineage4.2.2.2 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR4800452 Pre-XDR-TB lineage2.2.1 in
SRR1723980 Pre-XDR-TB lineage4.4.2 cn
SRR25340765 MDR-TB lineage1.1.2 None
ERR4831002 Pre-XDR-TB lineage4.2.2.2 np
ERR11488768 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488356 MDR-TB lineage2.2.1 None
SRR13583446 HR-TB lineage4.1.2 None
ERR212025 HR-TB lineage4.9 mw
ERR2515993 HR-TB lineage4.1.2.1 za
SAMN02053746 MDR-TB lineage4.3.3 za
ERR11488370 MDR-TB lineage4.3.4.2.1 None
SRR924233 Pre-XDR-TB lineage4.3.3 None
SRR25515102 MDR-TB lineage2.2.1 None
SRR25207380 Pre-XDR-TB lineage2.2.1 None
SRR1723608 MDR-TB lineage2.2.1 None
ERR3077943 MDR-TB lineage1.1.2 None
ERR6358705 MDR-TB lineage4.6.1.1 None
SRR921502 Pre-XDR-TB lineage2.1;lineage2.2.1 None
SRR19276612 HR-TB lineage4.1.1 None
SRR21276914 MDR-TB lineage2.2.1 None
SRR924224 Pre-XDR-TB lineage4.3.3 None
ERR7737693 MDR-TB lineage4.3.3 None
SRR833037 MDR-TB lineage4.3.3 None
SRR1165277 MDR-TB lineage4.3.3 None
SRR18714845 HR-TB lineage2.2.1 None
ERR11043389 MDR-TB lineage4.7 None
ERR4829907 HR-TB lineage4.1.2.1 it
ERR126642 HR-TB lineage4.1.1.3 mw
ERR11488474 MDR-TB lineage4.3.4.2.1 None
ERR11488544 MDR-TB lineage4.3.4.2.1 None
ERR13291592 HR-TB lineage2.2.1 None
ERR3509858 MDR-TB lineage2.2.1;lineage4.3.4.2.1 None
SRR12420737 MDR-TB lineage2.2.1 None
ERR11488411 MDR-TB lineage4.3.4.2.1 None
SRR1184299 MDR-TB lineage4.3.3 None
SRR11342656 MDR-TB lineage2.2.1 None
SRR1181356 MDR-TB lineage2.2.1 None
SAMN03246450 MDR-TB lineage2.2.1 cn
ERR2145524 MDR-TB lineage4.2.2.2 None
SRR6824545 MDR-TB lineage2.2.1 cn
ERR11082674 MDR-TB lineage4.8 None
SRR28045583 Pre-XDR-TB lineage4.1.1 None
ERR8975914 MDR-TB lineage4.3.3 None
ERR4797441 MDR-TB lineage4.2.2.2 in
ERR4810938 Pre-XDR-TB lineage2.2.1 cn
SRR28706614 MDR-TB lineage4.2.1.1 None
ERR718313 MDR-TB lineage2.2.1 th
ERR11488538 MDR-TB lineage4.3.4.2.1 None
ERR4810954 MDR-TB lineage2.2.1 cn
SRR1019134 MDR-TB lineage4.3.3 None
ERR2516514 Pre-XDR-TB lineage4.1.2 pe
ERR11489004 MDR-TB lineage2.2.1 None
SRR6824357 Pre-XDR-TB lineage4.4.2 None
ERR551380 MDR-TB lineage2.2.1 None
SRR6824387 MDR-TB lineage2.2.1 cn
ERR11488373 MDR-TB lineage4.3.4.2.1 None
SRR2101249 HR-TB lineage4.6.2.2 None
ERR11081269 MDR-TB lineage4.7 None
ERR11252445 MDR-TB lineage2.2.1 None
ERR4872251 MDR-TB lineage5.1.1 None
ERR4831481 Pre-XDR-TB lineage1.1.2 None
ERR7911190 MDR-TB lineage4.3.3 za
ERR4811475 HR-TB lineage2.2.1 cn
SRR671837 MDR-TB lineage2.2.1 cn
ERR2516365 MDR-TB lineage2.2.1 be
SRR1173403 MDR-TB lineage4.3.3 None
SRR21576538 MDR-TB lineage2.2.1 None
SRR6930907 MDR-TB lineage2.2.1 None
ERR9993093 MDR-TB lineage4.3.3 None
SRR28240124 HR-TB lineage4 None
ERR11488523 MDR-TB lineage4.3.4.2.1 None
ERR10680204 MDR-TB lineage4.1.2.1 None
SRR18665457 MDR-TB lineage4.1.2.1 None
SRR11342653 MDR-TB lineage2.2.1 None
ERR11488383 MDR-TB lineage4.3.4.2.1 None
SRR11662536 MDR-TB lineage2.2.1 None
SRR10315609 Pre-XDR-TB lineage4.3.3 None
SRR6824456 MDR-TB lineage2.2.1 cn
SRR11342636 MDR-TB lineage4.3.3 None
SRR16156753 Pre-XDR-TB lineage4.3.3 None
SRR1723714 MDR-TB lineage2.2.1 cn
SRR1723585 MDR-TB lineage2.2.1 None
SRR1723607 MDR-TB lineage2.2.1 None
SRR1723605 MDR-TB lineage2.2.1 None
SRR6832059 HR-TB lineage4.2.1 None
SAMN02586050 MDR-TB lineage4.3.3 za
ERR502958 MDR-TB lineage2.2.1 None
SRR1196754 MDR-TB lineage4.3.3 None
ERR11488496 MDR-TB lineage4.3.4.2.1 None
ERR11775618 MDR-TB lineage4.3.3 None
SRR29053131 MDR-TB lineage4.3.3 None
ERR351912 HR-TB lineage4.6.2.2 None
ERR11081138 MDR-TB lineage4.8 None
ERR11081999 HR-TB lineage4.1.2.1 None
ERR13260010 Pre-XDR-TB lineage2.2.2 None
SRR6930931 HR-TB lineage2.2.1 None
SRR7765063 Pre-XDR-TB lineage4.8 None
ERR3509857 MDR-TB lineage4.3.4.2.1 None
SRR21277848 MDR-TB lineage2.2.1.2 None
SRR1175307 XDR-TB lineage4.3.3 None
ERR11488620 MDR-TB lineage4.3.4.2.1 None
SRR21576570 MDR-TB lineage2.2.1 None
SRR15368990 Pre-XDR-TB lineage4.5 None
ERR11488532 MDR-TB lineage4.3.4.2.1 None
SAMN02586075 XDR-TB lineage4.3.3 None
SRR25206889 Pre-XDR-TB lineage2.1 None
ERR11488440 MDR-TB lineage4.3.4.2.1 None
SRR833149 MDR-TB lineage4.3.3 None
SRR1019140 MDR-TB lineage2.2.1 None
ERR5987411 Pre-XDR-TB lineage4.3.3 None
ERR11489063 Pre-XDR-TB lineage4.3.4.2.1 None
SRR6824479 MDR-TB lineage4.5 cn
SRR13583367 MDR-TB lineage4.4.1.1 None
ERR4808883 MDR-TB lineage2.2.1 za
ERR1213843 HR-TB lineage4 kr
ERR7737719 MDR-TB lineage2.2.1 None
SRR1175351 MDR-TB lineage4.3.3 None
DRR130199 Pre-XDR-TB lineage2.2.1 None
ERR11488452 MDR-TB lineage4.3.4.2.1 None
SRR28394181 HR-TB lineage4.3.4.2 None
ERR2516498 MDR-TB lineage4.3.3 nl
ERR11488449 MDR-TB lineage4.3.4.2.1 None
ERR3132296 HR-TB lineage4 None
SRR29050634 HR-TB lineage4.1.2.1 None
ERR3287746 HR-TB lineage4.3.4.1 pe
SRR15316019 MDR-TB lineage2.2.1 None
ERR158584 HR-TB lineage4.3.3 ru
ERR2179776 HR-TB lineage4.5 cn
SRR1180396 MDR-TB lineage2.2.1 None
SRR11342641 MDR-TB lineage4.3.3 None
ERR5918044 MDR-TB lineage2.2.1 za
SRR12420756 MDR-TB lineage2.2.1 None
ERR4872149 MDR-TB lineage4.6.2.2 None
SRR6824374 MDR-TB lineage2.2.1 cn
SRR20632802 Pre-XDR-TB lineage2.2.1 None
SRR13423542 Pre-XDR-TB lineage2.2.1 None
SRR6832336 HR-TB lineage4.3.3 None
SRR18693860 HR-TB lineage1.2.2.2 None
SRR16156723 Pre-XDR-TB lineage4.3.3 None
ERR11488334 MDR-TB lineage4.3.4.2.1 None
ERR10680220 MDR-TB lineage4.1.1.3 None
ERR11489062 MDR-TB lineage4.3.4.2.1 None
SRR13583465 HR-TB lineage4.1.2.1 None
ERR2179660 MDR-TB lineage4.4.2 cn
ERR11489028 Pre-XDR-TB lineage4.3.4.2.1 None
ERR3170404 MDR-TB lineage5.1.1 gh
ERR7911444 MDR-TB lineage4.3.3 za
SRR18665471 MDR-TB lineage4.1.2.1 None
ERR10680176 MDR-TB lineage4.1.2.1 None
ERR10680203 MDR-TB lineage6.2.2 None
SRR14782219 HR-TB lineage4.1.2.1 None
SRR1723549 MDR-TB lineage2.2.1 cn
SRR671744 MDR-TB lineage2.2.1 cn
SRR15316177 HR-TB lineage2.2.1.1 None
SRR8651591 MDR-TB lineage2.2.1.1 cn
SAMN02586097 MDR-TB lineage4.3.3 za
ERR11081855 MDR-TB lineage4.2.1 None
SRR11662306 MDR-TB lineage2.2.1 None
SRR15315838 MDR-TB lineage4.4.2 None
ERR4810981 Pre-XDR-TB lineage2.2.1 cn
ERR10748418 MDR-TB lineage2.2.1 None
ERR3509849 HR-TB lineage4.3.4.2.1 None
ERR4822354 MDR-TB lineage4.2.2 None
ERR4796599 Pre-XDR-TB lineage2.2.1 in
ERR7911496 MDR-TB lineage1.1.1 vn
ERR11488553 Pre-XDR-TB lineage4.3.4.2.1 None
SRR10305776 HR-TB lineage2.2.1 None
SRR1184321 MDR-TB lineage4.3.3 None
ERR6358868 MDR-TB lineage4.6.1.1 None
SRR20632795 Pre-XDR-TB lineage2.2.1 None
SRR21714052 HR-TB lineage1.1.3.1 None
ERR11488562 MDR-TB lineage4.3.4.2.1 None
SRR671758 MDR-TB lineage2.2.1.1 cn
SAMN01925657 Pre-XDR-TB lineage4.3.3 None
SRR25515377 MDR-TB lineage2.2.1 None
ERR10680021 MDR-TB lineage6.2.2 None
ERR8975722 MDR-TB lineage4.3.3 None
SRR6824412 MDR-TB lineage2.2.1 cn
SRR9971195 MDR-TB lineage4.3.3 None
ERR11488684 MDR-TB lineage4.3.4.2.1 None
ERR11488837 MDR-TB lineage4.3.4.2.1 None
SRR10500314 Pre-XDR-TB lineage1.1.2 None
ERR8975182 MDR-TB lineage2.2.1 None
ERR718488 MDR-TB lineage4.5 th
SAMN02350460 MDR-TB lineage4.3.3 za
ERR11043528 MDR-TB lineage4.8 None
SRR15315933 MDR-TB lineage2.2.1 None
DRR130195 MDR-TB lineage4.2.2 None
SRR1173000 MDR-TB lineage4.3.3 None
SRR29096121 HR-TB lineage4.4.2 None
SRR11349194 MDR-TB lineage4.3.3 None
ERR11488500 MDR-TB lineage4.3.4.2.1 None
SRR1723658 MDR-TB lineage2.2.1 cn
SRR18213811 HR-TB lineage4.6.2.2 None
SRR28044944 XDR-TB lineage4.2.2.2 None
ERR552915 MDR-TB lineage4.1.2.1;lineage4.3.4.2.1 None
ERR9993144 XDR-TB lineage2.2.1 None
ERR4818502 HR-TB lineage4.2.2.2 gb
SRR847775 Pre-XDR-TB lineage4.3.3 za
ERR7911436 MDR-TB lineage2.2.1 za
SRR15506889 MDR-TB lineage1.1.3.1 None
ERR553128_ERR553127_ERR553126 MDR-TB lineage2.2.1 None
ERR234577 HR-TB lineage4.2.1 ru
ERR2433003 MDR-TB lineage4.3.4.2.1 br
SRR11567796 Pre-XDR-TB lineage2.2.1 None
SRR14807637 MDR-TB lineage2.2.1 None
SRR10305828 MDR-TB lineage2.2.1 None
SRR1196670 MDR-TB lineage4.3.3 None
SRR16156695 Pre-XDR-TB lineage4.3.3 None
ERR5987340 MDR-TB lineage4.3.3 None
SRR1165327 MDR-TB lineage4.3.3 None
ERR8773876 Pre-XDR-TB lineage4.3.3 None
SRR6824304 MDR-TB lineage2.2.1;lineage4 cn
SRR6824484 XDR-TB lineage4.4.2 cn
SRR6930929 HR-TB lineage2.2.2 None
SRR6824336 MDR-TB lineage4.5 cn
SRR22873602 Pre-XDR-TB lineage2.2.1 None
ERR9119577 MDR-TB lineage4.6.2.2 None
SRR1723719 MDR-TB lineage2.2.1 None
ERR551381 MDR-TB lineage2.2.1 None
ERR10680112 MDR-TB lineage4.1.3 None
SRR1140946 MDR-TB lineage4.3.3 None
ERR4822345 MDR-TB lineage4.4.2 None
SRR1723671 MDR-TB lineage2.2.1 cn
ERR2516069 MDR-TB lineage4.3.3 za
SRR11567787 MDR-TB lineage2.2.1 None
SRR5153717 Pre-XDR-TB lineage4.1.2.1 None
ERR2516555 MDR-TB lineage4.1 nl
SRR21279442 HR-TB lineage2.2.1.1 None
SRR1175039 HR-TB lineage4.3.3 None
ERR11488512 MDR-TB lineage4.3.4.2.1 None
SRR11567786 Pre-XDR-TB lineage2.2.1 None
ERR4553408 MDR-TB lineage4.3 None
SRR1173107 MDR-TB lineage4.3.3 None
ERR7737758 MDR-TB lineage4.3.4.2.1 None
SRR1196587 MDR-TB lineage4.3.3 None
ERR11488994 MDR-TB lineage4.3.4.2.1 None
DRR130115 MDR-TB lineage4.4.2 None
ERR2179680 Pre-XDR-TB lineage4.4.2 cn
SRR5073900 HR-TB lineage2.2.1 vn
SRR5067682 HR-TB lineage2.2.1 vn
ERR13285158 Pre-XDR-TB lineage4.7 None
SRR11342667 MDR-TB lineage4.3.3 None
ERR221556 HR-TB lineage4.3.4.2.1 mw
SRR847782 Pre-XDR-TB lineage4.3.3 za
SRR1062854 Pre-XDR-TB lineage4.3.3 None
SRR1723568 MDR-TB lineage2.2.1 cn
SRR12416846 MDR-TB lineage4.7 None
ERR2516199 MDR-TB lineage4.1.2.1 be
ERR11488807 MDR-TB lineage4.3.4.2.1 None
SRR9971182 MDR-TB lineage4.3.3 None
ERR551381_ERR551380 MDR-TB lineage2.2.1 None
SRR10869188 Pre-XDR-TB lineage4.3.3 None
SRR21663286 HR-TB lineage4.2.2 None
ERR9993143 XDR-TB lineage2.2.1 None
ERR4831897 HR-TB lineage2.2.1 vn
SRR10315612 Pre-XDR-TB lineage4.3.3 None
SRR1196686 MDR-TB lineage4.3.3 None
SRR1140955 Pre-XDR-TB lineage4.3.3 None
ERR7911198 MDR-TB lineage4.3.3 za
SAMN02053768 MDR-TB lineage4.3.3 za
SRR1173106 HR-TB lineage4.3.3 None
ERR4811325 Pre-XDR-TB lineage4.2.2 cn
ERR11081950 MDR-TB lineage4.8 None
SRR22873607 XDR-TB lineage2.2.1 None
SRR27069422 Pre-XDR-TB lineage2.2.1 None
SRR25207007 MDR-TB lineage4.5 None
SRR10040422 MDR-TB lineage2.2.1 None
ERR13285029 MDR-TB lineage4.8 None
ERR2516492 Pre-XDR-TB lineage4.3.3 pe
SRR24709919 MDR-TB lineage2.2.1 None
SRR29050875 HR-TB lineage4.1.2 None
ERR13288943 XDR-TB lineage4.3.3 None
ERR13298139 MDR-TB lineage4.4.2 None
SRR1062847 MDR-TB lineage4.3.3 None
ERR11488635 MDR-TB lineage4.3.4.2.1 None
ERR6358722 MDR-TB lineage4.6.1.1 None
SRR15364434 Pre-XDR-TB lineage4.9 None
SRR21732177 HR-TB lineage1.2.1.2.1 None
ERR8773874 Pre-XDR-TB lineage4.3.3 None
SRR833067 MDR-TB lineage4.3.3 None
ERR6358850 MDR-TB lineage4.7 None
SAMN02398702 Pre-XDR-TB lineage2.2.1 kr
ERR2984798 MDR-TB lineage4.3.2 None
SRR25207320 Pre-XDR-TB lineage4.2.2 None
SRR13423613 Pre-XDR-TB lineage4.4.2 None
SRR29081652 MDR-TB lineage4 None
SRR15316325 HR-TB lineage2.2.1 None
ERR553127 MDR-TB lineage2.2.1 None
ERR11081043 Pre-XDR-TB lineage4.1.2.1 None
SRR16156718 Pre-XDR-TB lineage4.3.3 None
ERR11488845 MDR-TB lineage4.3.4.2.1 None
ERR11489032 MDR-TB lineage2.2.1 None
ERR13266796 Pre-XDR-TB lineage4.2.2.2 None
ERR11488340 MDR-TB lineage4.3.4.2.1 None
ERR502899 Pre-XDR-TB lineage2.2.1 None
SRR25207072 MDR-TB lineage2.2.1 None
SAMN01925669 Pre-XDR-TB lineage4.3.3 None
SRR25827638 Pre-XDR-TB lineage2.2.1;lineage4 None
SRR11342655 MDR-TB lineage2.2.1 None
ERR13266638 HR-TB lineage2.2.1 None
SAMN02350440 Pre-XDR-TB lineage4.3.3 za
SAMN02585987 MDR-TB lineage4.3.3 za
SRR12420479 Pre-XDR-TB lineage2.2.1 None
SRR1019162 Pre-XDR-TB lineage4.3.3 None
SRR11662258 HR-TB lineage4.5 None
SRR6982440 MDR-TB lineage4.3.4.2.1 None
ERR10680166 MDR-TB lineage6.2.2 None
ERR11252569 MDR-TB lineage2.2.1 None
SAMN03246351 MDR-TB lineage2.2.1 cn
SRR28239687 HR-TB lineage4.2.1 None
SRR6824433 MDR-TB lineage2.2.1 cn
SRR6824494 MDR-TB lineage2.2.1 cn
ERR2516654 MDR-TB lineage2.2.1.1 pe
SRR8651662 Pre-XDR-TB lineage2.2.1 None
SRR29772541 MDR-TB lineage1.2.2.2 None
SRR29772545 MDR-TB lineage2.2.1 None
SRR29772590 MDR-TB lineage4.3.3 None
SRR29772591 MDR-TB lineage4.1.1.3 None
SRR29539406 HR-TB lineage2.2.1;lineage4.2.1 None
SRR21798443 HR-TB lineage4.2.1 None
ERR4831006 Pre-XDR-TB lineage4.2.2.2 np
SAMN02350477 MDR-TB lineage4.3.3 za
SRR11342654 MDR-TB lineage2.2.1 None
SRR9971097 Pre-XDR-TB lineage4.3.3 None
ERR2516598 Pre-XDR-TB lineage4.1.1 pe
SAMEA2535156 MDR-TB lineage2.2.1 uz
SAMN02350420 MDR-TB lineage4.3.3 za
SRR12420341 Pre-XDR-TB lineage2.2.1 None
SRR13583355 HR-TB lineage4.1.2.1 None
SRR14782218 HR-TB lineage4.1.2.1 None
ERR9119541 MDR-TB lineage5.1 None
ERR2516920 MDR-TB lineage4.1.2.1 gb
SRR6824376 MDR-TB lineage2.2.1 cn
SRR9613552 MDR-TB lineage2.2.2 None
SRR9971053 MDR-TB lineage4.3.3 None
SRR9971374 Pre-XDR-TB lineage4.3.3 None
SRR1172801 XDR-TB lineage4.3.3 None
SRR25207164 MDR-TB lineage2.2.1 None
ERR13286209 MDR-TB lineage4.3.3 None
ERR11488384 MDR-TB lineage2.2.1 None
ERR11488575 Pre-XDR-TB lineage4.3.4.2.1 None
SRR12199399 HR-TB lineage1.1.1 None
SRR26399579 HR-TB lineage2.2.1 None
ERR11488655 MDR-TB lineage4.3.4.2.1 None
ERR4872135 MDR-TB lineage5.1 None
SRR1723586 MDR-TB lineage2.2.1 None
SRR28393316 MDR-TB lineage4 None
ERR3794501 MDR-TB lineage2.2.1 None
SAMN03246632 MDR-TB lineage4.5 cn
SRR23310824 MDR-TB lineage2.2.1 None
SRR1172843 MDR-TB lineage4.3.3 None
SRR6824295 MDR-TB lineage2.2.1 cn
SRR28393630 MDR-TB lineage4.1.2.1 None
SRR16370411 MDR-TB lineage4.3.3 None
ERR2099790 MDR-TB lineage4.1.2.1 es
SRR29051238 HR-TB lineage4.3.4.2 None
SRR2024922 Pre-XDR-TB lineage2.2.1 cn
SAMN02403513 MDR-TB lineage4.3.3 za
SRR1723604 MDR-TB lineage2.2.1 None
ERR7911136 MDR-TB lineage2.2.1 vn
SAMN03246332 MDR-TB lineage2.2.1 None
ERR2041765 MDR-TB lineage4.1.2.1 rs
SRR16097540 HR-TB lineage2.2.1 None
ERR11773737 Pre-XDR-TB lineage4.3.3 None
SAMN02403512 MDR-TB lineage4.3.3 za
SRR1140944 MDR-TB lineage4.3.3 None
SRR28393347 MDR-TB lineage4.1.2 None
SRR29274082 Pre-XDR-TB lineage4.3.3 None
SRR25389475 MDR-TB lineage2.2.1 None
ERR553000 MDR-TB lineage6.2.2 None
SRR9971358 MDR-TB lineage2.2.1 None
ERR9119551 MDR-TB lineage4.6.2.2 None
ERR11488709 Pre-XDR-TB lineage4.3.4.2.1 None
SRR30180322 MDR-TB lineage2.2.1 None
ERR8975795 MDR-TB lineage2.2.1 None
SRR1180315 MDR-TB lineage2.2.1 None
SRR9971173 MDR-TB lineage4.3.3 None
ERR13273279 MDR-TB lineage2.2.1;lineage4.2.1.1 None
SRR12420388 Pre-XDR-TB lineage2.2.1 None
ERR4829116 HR-TB lineage4.2.1 it
SRR12420591 Pre-XDR-TB lineage2.2.1 None
SRR14801937 MDR-TB lineage2.2.1 None
SRR1011483 Pre-XDR-TB lineage4.3.3 None
SRR6832857 HR-TB lineage2.2.1;lineage4.2.1 None
SRR9971047 MDR-TB lineage4.3.3 None
ERR11082011 MDR-TB lineage2.2.1 None
ERR13258499 MDR-TB lineage2.2.1 None
ERR13262012 Pre-XDR-TB lineage4.2.2.2 None
ERR1035206 HR-TB lineage4.8 pt
ERR10679993 MDR-TB lineage6.2.3 None
ERR3132169 HR-TB lineage4.1.2.1 None
SAMN02053741 MDR-TB lineage4.3.3 za
SRR29273731 Pre-XDR-TB lineage4.1.2.1 None
SRR11342666 MDR-TB lineage4.3.3 None
SRR11349133 MDR-TB lineage4.3.3 None
DRR130240 HR-TB lineage4.2.2 None
ERR11775060 MDR-TB lineage4.9.1 None
ERR13285022 MDR-TB lineage2.2.1 None
ERR13291072 MDR-TB lineage2.2.1 None
ERR11488365 MDR-TB lineage2.2.1 None
SRR29231535 HR-TB lineage4.2.2.2 None
ERR11488515 MDR-TB lineage4.3.4.2.1 None
DRR130150 MDR-TB lineage4.2.2 None
ERR13249162 HR-TB lineage2.2.1 None
ERR9119877 Pre-XDR-TB lineage4.3.3 None
SRR1184389 MDR-TB lineage4.3.3 None
ERR9992827 MDR-TB lineage4.3.3 None
SRR28240166 HR-TB lineage4.8 None
SRR1173532 MDR-TB lineage4.3.3 None
SRR6824650 MDR-TB lineage2.2.1 cn
SRR6824651 Pre-XDR-TB lineage2.2.1.1 cn
SRR28393959 MDR-TB lineage2.2.1.1 None
ERR11252494 MDR-TB lineage4.3.4.2.1 None
SRR28351295 HR-TB lineage2.2.1 None
SRR6824667 Pre-XDR-TB lineage4.4.2 cn
SRR6831772 MDR-TB lineage4.2.1 None
SRR833106 MDR-TB lineage4.3.3 None
SRR8651577 Pre-XDR-TB lineage2.2.1 cn
SRR29538933 HR-TB lineage4.2.1 None
SRR29772462 MDR-TB lineage2.2.1 None
SRR25207010 Pre-XDR-TB lineage2.2.1 None
ERR2516422 MDR-TB lineage4.7 pe
ERR6358725 MDR-TB lineage4.6.1.2 None
SRR11349205 MDR-TB lineage2.2.1 None
SRR16156743 Pre-XDR-TB lineage4.3.3 None
SRR1723466 HR-TB lineage2.2.1 cn
ERR11081003 HR-TB lineage4.1.2.1 None
ERR11081955 MDR-TB lineage4.6.2.2 None
ERR7737895 MDR-TB lineage4.3.3 None
SRR1723793 MDR-TB lineage2.2.1 cn
SRR11342637 MDR-TB lineage4.3.3 None
SRR15465766 MDR-TB lineage1.1.3.1 None
SRR1723701 Pre-XDR-TB lineage2.2.1.1 cn
SRR12420276 MDR-TB lineage2.2.1 None
SRR1723917 MDR-TB lineage4.5 None
SRR1723982 MDR-TB lineage4.4.2 cn
ERR2706916 MDR-TB lineage4.6.1.2 cd
SRR6832386 HR-TB lineage4.2.1 None
SRR18714952 MDR-TB lineage4.2.1 None
ERR11488931 XDR-TB lineage4.3.4.2.1 None
ERR11488996 MDR-TB lineage4.3.4.2.1 None
ERR2184208 HR-TB lineage4.1.1 pe
SRR29539613 HR-TB lineage4.2.1 None
SRR1723918 MDR-TB lineage4.5 None
SRR27241220 MDR-TB lineage2.2.1 None
ERR3509862 MDR-TB lineage4.3.4.2.1 None
SRR12420650 MDR-TB lineage2.2.1 None
SRR28393387 MDR-TB lineage2.2.1.1 None
ERR10680057 MDR-TB lineage4.4.1.1 None
ERR10680100 MDR-TB lineage4.1 None
SRR28393315 MDR-TB lineage4.3.3 None
ERR2516464 MDR-TB lineage4.1.2.1 pe
ERR502957 MDR-TB lineage2.2.1 None
ERR11488676 MDR-TB lineage4.3.4.2.1 None
ERR11488782 MDR-TB lineage4.3.4.2.1 None
SRR25206894 Pre-XDR-TB lineage2.2.1 None