Rv2428 - c.-52C>T

Drug resistance types
0 Sensitive 0 RR-TB 29 HR-TB 116 MDR-TB 33 Pre-XDR-TB 1 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.2.2.2 4
lineage4.3.3 35
lineage2.2.1 68
lineage6.2.2 1
lineage4.5 7
lineage4.1.2 1
lineage4.4.2 9
lineage4 1
lineage4.2.2 2
lineage2.2.1.1 7
lineage4.6.1.2 3
lineage4. 3
lineage4.1.2.1 10
lineage4.3.4.1 1
lineage4.7 2
lineage4.1.1 2
lineage5.1.1 2
lineage2.2 2
lineage4.2.1 2
lineage4.3.1 1
lineage1.1.1 1
lineage4.6.1.1 4
lineage4.8 1
lineage4.1.1.3 1
lineage4.3.4.2 1
lineage4.3.2 1
lineage1.1.2 1
lineage4.4.1.1 1
lineage4.6.2.2 1
lineage4.5;lineage2.2.1 1
lineage4;lineage2.2.1 1
lineage4.9 1
lineage4.1 1
spoligotype Counts
spoligotype Count
None 179
Geographic prevalence
Country level data for this variant is available for 149 isolates.
Statisctical support
Not enough data to calculate support.
ID Drug resistance Lineage Country iso2
ERR4797441 MDR-TB lineage4.2.2.2 in
ERR7911073 Pre-XDR-TB lineage4.3.3 za
ERR8975722 MDR-TB lineage4.3.3 None
ERR7911436 MDR-TB lineage2.2.1 za
ERR553000 MDR-TB lineage6.2.2 None
SAMN02350465 MDR-TB lineage2.2.1 za
SRR6824479 MDR-TB lineage4.5 cn
ERR2516514 Pre-XDR-TB lineage4.1.2 pe
ERR4831897 HR-TB lineage2.2.1 vn
ERR7911198 MDR-TB lineage4.3.3 za
SRR1723466 HR-TB lineage2.2.1 cn
SRR6824357 Pre-XDR-TB lineage4.4.2 None
SRR6824433 MDR-TB lineage2.2.1 cn
ERR1213843 HR-TB lineage4 kr
SAMN02586014 MDR-TB lineage4.3.3 za
SRR671744 MDR-TB lineage2.2.1 cn
SAMN02585979 MDR-TB lineage2.2.1 za
ERR4811325 Pre-XDR-TB lineage4.2.2 cn
SRR5067682 HR-TB lineage2.2.1 vn
ERR2516654 MDR-TB lineage2.2.1.1 pe
ERR1199101 MDR-TB lineage4.6.1.2 cd
SAMN02398702 Pre-XDR-TB lineage2.2.1 kr
SRR6824387 MDR-TB lineage2.2.1 cn
ERR2433007 MDR-TB lineage4. None
ERR553062 HR-TB lineage4.1.2.1 de
ERR3287746 HR-TB lineage4.3.4.1 pe
ERR6358850 MDR-TB lineage4.7 None
SAMN02403513 MDR-TB lineage4.3.3 za
ERR2516498 MDR-TB lineage4.3.3 nl
SAMN02350477 MDR-TB lineage4.3.3 za
SAMN02403512 MDR-TB lineage4.3.3 za
ERR2516598 Pre-XDR-TB lineage4.1.1 pe
SRR5073723 HR-TB lineage2.2.1 vn
ERR4809168 MDR-TB lineage4.3.3 za
SAMN03246351 MDR-TB lineage2.2.1 cn
ERR2516422 MDR-TB lineage4.7 pe
SRR847782 Pre-XDR-TB lineage4.3.3 za
ERR2179776 HR-TB lineage4.5 cn
SRR6824374 MDR-TB lineage2.2.1 cn
SRR6824484 XDR-TB lineage4.4.2 cn
SRR1723714 MDR-TB lineage2.2.1 cn
ERR7911443 MDR-TB lineage4.3.3 za
ERR4832031 HR-TB lineage2.2.1 vn
ERR4822360 MDR-TB lineage2.2.1 None
ERR2099790 MDR-TB lineage4.1.2.1 es
ERR502899 Pre-XDR-TB lineage2.2.1 None
SRR2024922 Pre-XDR-TB lineage2.2.1 cn
SRR8651577 Pre-XDR-TB lineage2.2.1 cn
ERR2179660 MDR-TB lineage4.4.2 cn
ERR3170404 MDR-TB lineage5.1.1 gh
SRR23310824 MDR-TB lineage2.2 None
ERR2179680 Pre-XDR-TB lineage4.4.2 cn
ERR2516920 MDR-TB lineage4.1.2.1 gb
ERR7737719 MDR-TB lineage2.2 None
SRR1723586_SRR1723585 MDR-TB lineage2.2.1 None
ERR2041765 MDR-TB lineage4.1.2.1 rs
ERR234577 HR-TB lineage4.2.1 ru
SRR15723130 HR-TB lineage2.2.1 None
ERR5918044 MDR-TB lineage2.2.1 za
SAMN02586022 MDR-TB lineage4.3.3 za
ERR4829116 HR-TB lineage4.2.1 it
ERR4797621 Pre-XDR-TB lineage2.2.1 in
ERR2515286 Pre-XDR-TB lineage4.3.3 za
ERR2516365 MDR-TB lineage2.2.1 be
ERR2516727 MDR-TB lineage2.2.1.1 None
ERR7911444 MDR-TB lineage4.3.3 za
ERR550722 HR-TB lineage4.1.2.1 de
SRR2101443 HR-TB lineage2.2.1 None
ERR8975795 MDR-TB lineage2.2.1 None
SRR1723549 MDR-TB lineage2.2.1 cn
SRR6824465 MDR-TB lineage2.2.1 cn
SRR6824651 Pre-XDR-TB lineage2.2.1.1 cn
SAMN02053741 MDR-TB lineage4.3.3 za
SRR671784 Pre-XDR-TB lineage2.2.1 cn
SAMN02053746 MDR-TB lineage4.3.3 za
SRR6824360 MDR-TB lineage4.5 cn
SRR1723793 MDR-TB lineage2.2.1 cn
ERR2516069 MDR-TB lineage4.3.3 za
SAMN02586075 Pre-XDR-TB lineage4.3.3 None
ERR4831002 Pre-XDR-TB lineage4.2.2.2 np
SRR6824559 MDR-TB lineage2.2.1 cn
ERR2515993 HR-TB lineage4.1.2.1 za
ERR4822354 MDR-TB lineage4.2.2 None
ERR4830712 HR-TB lineage4.3.1 dz
SRR6824376 MDR-TB lineage2.2.1 cn
ERR7911496 MDR-TB lineage1.1.1 vn
ERR6358705 MDR-TB lineage4.6.1.1 None
SRR671758 MDR-TB lineage2.2.1.1 cn
SAMN02053768 MDR-TB lineage4.3.3 za
ERR4829907 HR-TB lineage4.1.2.1 it
ERR1035206 HR-TB lineage4.8 pt
ERR2516492 Pre-XDR-TB lineage4.3.3 pe
ERR4811475 HR-TB lineage2.2.1 cn
ERR4808883 MDR-TB lineage2.2.1 za
ERR126642 HR-TB lineage4.1.1.3 mw
ERR4800452 Pre-XDR-TB lineage2.2.1 in
ERR6358722 MDR-TB lineage4.6.1.1 None
SAMN02586097 MDR-TB lineage4.3.3 za
SRR6824412 MDR-TB lineage2.2.1 cn
ERR2516464 MDR-TB lineage4.1.2.1 pe
SRR5073900 HR-TB lineage2.2.1 vn
ERR4796599 Pre-XDR-TB lineage2.2.1 in
ERR8975182 MDR-TB lineage2.2.1 None
ERR7911136 MDR-TB lineage2.2.1 vn
SRR8651591 MDR-TB lineage2.2.1.1 cn
SAMN02350460 MDR-TB lineage4.3.3 za
ERR4809188 MDR-TB lineage2.2.1 za
ERR502957 MDR-TB lineage2.2.1 None
SAMEA2535156 MDR-TB lineage2.2.1 uz
SAMN03246450 MDR-TB lineage2.2.1 cn
ERR4810954 MDR-TB lineage2.2.1 cn
ERR4810981 Pre-XDR-TB lineage2.2.1 cn
SRR6824545 MDR-TB lineage2.2.1 cn
ERR718488 MDR-TB lineage4.5 th
ERR4813791 HR-TB lineage4.3.4.2 br
ERR718313 MDR-TB lineage2.2.1 th
ERR6358869 MDR-TB lineage4.6.1.1 None
ERR7911209 MDR-TB lineage4.3.3 za
ERR8975914 MDR-TB lineage4.3.3 None
ERR4810938 Pre-XDR-TB lineage2.2.1 cn
ERR4818502 HR-TB lineage4.2.2.2 gb
SRR7341648 Pre-XDR-TB lineage4.1.2.1 ro
ERR2516003 MDR-TB lineage2.2.1 za
SAMN02350486 Pre-XDR-TB lineage4.3.3 za
ERR8976013 MDR-TB lineage4.3.3 None
SRR6824494 MDR-TB lineage2.2.1 cn
SRR6824434 MDR-TB lineage4.4.2 cn
SAMN03246349 MDR-TB lineage2.2.1 cn
ERR7911194 MDR-TB lineage2.2.1 za
SAMN02350434 MDR-TB lineage4.3.3 za
ERR2706916 MDR-TB lineage4.6.1.2 cd
SRR6824336 MDR-TB lineage4.5 cn
ERR2516589 MDR-TB lineage4.3.2 pe
SRR1723568 MDR-TB lineage2.2.1 cn
ERR6358725 MDR-TB lineage4.6.1.2 None
ERR2179666 MDR-TB lineage4.5 cn
SRR960978 MDR-TB lineage2.2.1 cn
ERR4810642 HR-TB lineage2.2.1 cn
ERR7911190 MDR-TB lineage4.3.3 za
ERR3170488 MDR-TB lineage5.1.1 gh
ERR4822345 MDR-TB lineage4.4.2 None
ERR4831481 Pre-XDR-TB lineage1.1.2 None
SRR1723658 MDR-TB lineage2.2.1 cn
SRR671837 MDR-TB lineage2.2.1 cn
SRR1723671 MDR-TB lineage2.2.1 cn
SRR1723982 MDR-TB lineage4.4.2 cn
ERR6358868 MDR-TB lineage4.6.1.1 None
SRR6824650 MDR-TB lineage2.2.1 cn
ERR2433003 MDR-TB lineage4. br
ERR4811286 MDR-TB lineage2.2.1 cn
ERR1035100 Pre-XDR-TB lineage2.2.1.1 vn
ERR4831006 Pre-XDR-TB lineage4.2.2.2 np
ERR4796975 MDR-TB lineage4.4.1.1 in
SRR847775 Pre-XDR-TB lineage4.3.3 za
SRR6824456 MDR-TB lineage2.2.1 cn
SRR1723701 Pre-XDR-TB lineage2.2.1.1 cn
ERR502958 MDR-TB lineage2.2.1 None
SAMN02586050 MDR-TB lineage4.3.3 za
SAMN02350440 Pre-XDR-TB lineage4.3.3 za
SRR2101249 HR-TB lineage4.6.2.2 None
ERR2516199 MDR-TB lineage4.1.2.1 be
SRR1723980 Pre-XDR-TB lineage4.4.2 cn
ERR221556 HR-TB lineage4. mw
SRR671727 MDR-TB lineage2.2.1 cn
SRR6824667 Pre-XDR-TB lineage4.4.2 cn
ERR2184208 HR-TB lineage4.1.1 pe
SRR1723811 MDR-TB lineage2.2.1 cn
ERR158584 HR-TB lineage4.3.3 ru
ERR7911207 MDR-TB lineage4.3.3 za
SAMN02350420 MDR-TB lineage4.3.3 za
SRR6824646 MDR-TB lineage4.5;lineage2.2.1 cn
SRR6824304 MDR-TB lineage4;lineage2.2.1 cn
SAMN03246632 MDR-TB lineage4.5 cn
SRR8651662 Pre-XDR-TB lineage2.2.1 None
ERR212025 HR-TB lineage4.9 mw
SRR6824295 MDR-TB lineage2.2.1 cn
SAMEA2533899 MDR-TB lineage2.2.1 uz
ERR2516555 MDR-TB lineage4.1 nl
SAMN02585987 MDR-TB lineage4.3.3 za