Rv2752c - c.1081_1083delAGAinsCC
Drug resistance types
4 Sensitive
5 RR-TB
60 HR-TB
6 MDR-TB
3 Pre-XDR-TB
3 XDR-TB
65 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage6.3 | 2 |
| lineage4.8 | 1 |
| lineage4.9 | 47 |
| lineage2.1;lineage4.9;lineage6.3 | 8 |
| lineage4.6.1.1 | 1 |
| lineage2.1;lineage4.9 | 11 |
| lineage4 | 3 |
| La1.7;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.2.1 | 6 |
| lineage4.1.2.1 | 5 |
| M.canetti;lineage2.2 | 2 |
| 11 | |
| lineage4.9;lineage6.3 | 2 |
| lineage3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage2.1 | 3 |
| lineage4.9;lineage7 | 3 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.2.1;lineage3 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage6.3.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 146 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9786569 | Other | lineage4.8 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6785527 | Sensitive | lineage2.2.1 | None | SRR3675246 | Other | lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR9786671 | Other | None | SRR18213713 | HR-TB | None | SRR25827682 | Other | None | ERR9787197 | Other | None | ERR4797474 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR3675284 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR5341453 | Other | lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR9786604 | Other | None | SRR6789626 | Other | None | ERR4407463 | HR-TB | None | ERR4817060 | Other | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675275 | Other | lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR3283044 | Other | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR26159043 | Other | lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR5341467 | Other | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR1063896 | HR-TB | None | ERR9117709 | Other | None | ERR234659 | HR-TB | None | ERR137286 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR702405 | HR-TB | lineage4.9 | None |
|---|
