lineage | Count |
---|---|
60 | |
lineage2.2 | 4 |
lineage4 | 4 |
lineage4.3.4.1 | 1 |
lineage2.2.1 | 2 |
lineage3.1 | 1 |
lineage4.5 | 1 |
lineage4.1 | 1 |
lineage4.9 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 78 |
ID | Drug resistance | Lineage | Country iso2 | ERR3283036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323043 | HR-TB | None | ERR3283027 | HR-TB | None | ERR502532 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797069 | Other | None | ERR4769452 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4769450 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR702404 | HR-TB | None | ERR736839 | Other | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | SRR1167384 | Other | lineage4 | None | ERR9786671 | Other | None | ERR9786843 | Other | None | SRR1169194 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1173629 | Other | None | SRR1172951 | Other | None | SRR1173778 | Other | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1184294 | HR-TB | None | SRR1184388 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR12416824 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR14782405 | HR-TB | None | SRR25827682 | Other | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR4816656 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675270 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | SRR8692807 | Other | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675465 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675558 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4818929 | HR-TB | None | ERR234659 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045053 | Other | None | SRR6046133 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6325444 | HR-TB | None | SRR6046492 | Other | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None |
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