Rv2764c - c.-80_-24delCGCTGGGTTTGTTTGGCGGCGAGTCGCTGCGGCGGCTTCGCCGCGCTTGCGATCGCC

Drug resistance types
337 Sensitive 0 RR-TB 15 HR-TB 21 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 18 Other
lineage Counts
lineage Count
La3 266
lineage4.5 20
lineage2.2.1 10
lineage1.1.1.1 1
lineage4.3 19
lineage4.3.3 10
lineage4.4.1.1 2
lineage4.1.2.1 15
La3;lineage4 2
lineage4 13
lineage1.1.2 7
lineage4.7 1
lineage4.1.1 2
lineage1.2.2.2 4
lineage4.4.2 2
lineage1.2.1.2.1 4
lineage4.1.1.3 3
lineage4.1.1.1 4
lineage4.2.2 8
lineage2.2.1.2 2
lineage4.3.1 2
1
lineage4.6 1
lineage3 1
spoligotype Counts
spoligotype Count
None 400
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2517593 Sensitive La3 nl
ERR2179789 Sensitive lineage4.5 cn
ERR2179862 Sensitive lineage4.5 cn
SRR25534465 Sensitive lineage2.2.1 None
SRR5073639 Sensitive lineage1.1.1.1 vn
ERR4830895 Sensitive lineage4.3 None
SRR10808987 Sensitive lineage4.3.3 None
SRR29052939 Sensitive La3 None
SRR25515230 Other lineage2.2.1 None
ERR4796505 Sensitive La3 in
SRR16058599 Sensitive La3 None
ERR234675 Sensitive La3 None
ERR13273105 Sensitive lineage4.4.1.1 None
SRR16370463 Sensitive lineage4.3 None
ERR9125109 Sensitive La3 None
SRR7131127 Other La3 None
SRR10809090 Sensitive lineage4.3.3 None
ERR9125525 Sensitive La3 None
ERR9125525 Sensitive La3 None
SRR14520038 HR-TB lineage4.3.3 None
SRR21686594 Sensitive lineage4.3 None
SRR21686594 Sensitive lineage4.3 None
ERR11049793 Sensitive lineage4.1.2.1 None
ERR4822142 Sensitive La3 None
ERR11049614 Sensitive La3;lineage4 None
ERR13261697 MDR-TB lineage4 None
ERR13261697 MDR-TB lineage4 None
ERR13260256 MDR-TB lineage4 None
ERR13260256 MDR-TB lineage4 None
ERR4820312 Sensitive La3 None
ERR13260581 Pre-XDR-TB lineage4 None
ERR4821950 Sensitive La3 None
SRR6797355 Sensitive La3 None
SRR27450480 Sensitive La3 None
ERR13266060 Sensitive lineage1.1.2 None
SRR27450393 Sensitive La3 None
SRR21710734 Sensitive lineage4.3 None
SRR29053033 Sensitive La3 None
SRR29053033 Sensitive La3 None
ERR11067403 Sensitive La3 None
SRR16058369 Sensitive La3 None
SRR16058369 Sensitive La3 None
ERR9125663 Sensitive La3 None
ERR9125663 Sensitive La3 None
ERR11067404 Sensitive La3 None
ERR11050926 Sensitive lineage4.7 None
SRR16057940 Sensitive La3 None
ERR11068278 Sensitive La3 None
ERR13289541 Sensitive La3 None
SRR29051189 Sensitive lineage4.3 None
SRR28858676 Sensitive La3 None
SRR28858676 Sensitive La3 None
ERR4024805 HR-TB lineage4.1.1 None
SRR16089393 Sensitive La3 None
ERR11067940 Sensitive La3 None
ERR13292269 Sensitive lineage1.2.2.2 None
ERR13292269 Sensitive lineage1.2.2.2 None
SRR27450292 Sensitive lineage4.5 None
ERR11050836 Sensitive La3 None
ERR6865319 HR-TB lineage4.1.1 None
SRR28351414 Sensitive La3 None
SRR28351414 Sensitive La3 None
ERR3077981 Sensitive lineage1.1.2 None
SRR27450590 Sensitive lineage4.5 None
SRR28409674 Sensitive La3 None
SRR28409674 Sensitive La3 None
ERR2512942 Sensitive La3 None
ERR13261654 MDR-TB lineage4 None
ERR13261654 MDR-TB lineage4 None
ERR4814716 Sensitive La3 None
ERR13290842 Sensitive lineage4.4.2 None
SRR28859928 Sensitive La3 None
SRR29056019 Other La3 None
ERR13252649 Sensitive lineage1.2.1.2.1 None
ERR13252649 Sensitive lineage1.2.1.2.1 None
ERR4817328 Sensitive La3 None
SRR27069393 MDR-TB lineage4.5 None
SRR27069393 MDR-TB lineage4.5 None
SRR27450479 Sensitive La3 None
SRR27450477 Sensitive La3 None
ERR9125596 Sensitive La3 None
ERR9125596 Sensitive La3 None
ERR11082770 Sensitive lineage4.4.1.1 None
ERR13292244 Sensitive lineage4.1.1.3 None
ERR4829235 Other La3 None
SRR12882663 Sensitive lineage1.1.2 None
ERR2653120 MDR-TB lineage4.1.1.1 None
SRR28868577 Other La3 None
ERR13284010 Sensitive lineage4.5 None
SRR27450596 Sensitive La3 None
ERR13291178 Sensitive La3 None
ERR13291178 Sensitive La3 None
ERR13292080 Sensitive lineage4.3 None
SRR29053316 Sensitive La3 None
SRR29053316 Sensitive La3 None
SRR27450188 Sensitive La3 None
SRR27450188 Sensitive La3 None
SRR14782149 Sensitive lineage4.3.3 None
SRR16370464 Sensitive lineage4.3 None
SRR16370464 Sensitive lineage4.3 None
SRR15316507 Sensitive lineage4.5 None
SRR29053533 Sensitive La3 None
SRR29053533 Sensitive La3 None
SRR16058087 Other lineage4.3 None
SRR28923836 Pre-XDR-TB lineage2.2.1 None
SRR28923836 Pre-XDR-TB lineage2.2.1 None
ERR228223 Sensitive La3 None
ERR4821658 Other La3 None
ERR4813974 HR-TB lineage4.1.2.1 None
ERR11082243 Sensitive lineage2.2.1 None
ERR4820516 Sensitive La3 None
ERR9121359 Sensitive lineage4.1.2.1 None
ERR9121359 Sensitive lineage4.1.2.1 None
ERR13291776 Sensitive La3 None
ERR13291776 Sensitive La3 None
SRR29053222 Sensitive La3 None
SRR18715348 Sensitive lineage4.1.2.1 None
SRR6046131 Sensitive La3 None
ERR13290071 Sensitive La3 None
SRR27450611 Sensitive La3 None
ERR11067178 Sensitive La3 None
ERR13289791 Sensitive La3 None
ERR13290205 Sensitive La3 None
ERR11049303 Sensitive La3 None
ERR11049551 Sensitive La3 None
SRR29052772 Sensitive La3 None
SRR29052772 Sensitive La3 None
SRR6480634 HR-TB lineage4.3.3 None
ERR4195780 Sensitive lineage4.1.2.1 None
ERR4195780 Sensitive lineage4.1.2.1 None
SRR10040465 Pre-XDR-TB lineage4.5 None
ERR294241 Sensitive La3 None
SRR10808736 HR-TB lineage4.3.3 None
ERR11050813 Sensitive lineage1.1.2 None
SRR16089410 Sensitive La3 None
SRR16089410 Sensitive La3 None
ERR13290109 Sensitive La3 None
ERR7361915 MDR-TB lineage4.1.2.1 None
SRR20969567 Sensitive lineage4.2.2 None
SRR20969567 Sensitive lineage4.2.2 None
ERR11050692 Sensitive La3 None
SRR16058605 Sensitive La3 None
DRR188941 Sensitive lineage1.2.1.2.1 None
DRR188941 Sensitive lineage1.2.1.2.1 None
SRR18912072 Sensitive lineage4.1.1.3 None
SRR22048363 Sensitive La3 None
ERR13285369 Sensitive lineage4.5 None
SRR15316002 HR-TB lineage4.5 None
SRR15316002 HR-TB lineage4.5 None
ERR11049411 Sensitive La3 None
ERR9125087 Sensitive La3 None
ERR9125155 Other lineage4.3 None
SRR27450483 Sensitive La3 None
SRR29053502 Sensitive La3 None
SRR29053502 Sensitive La3 None
SRR16089392 Sensitive La3 None
SRR16089392 Sensitive La3 None
ERR330708 Sensitive lineage4.2.2 None
SRR28858716 Sensitive La3 None
SRR28351652 Sensitive La3 None
SRR28351652 Sensitive La3 None
SRR27069368 MDR-TB lineage4.5 None
SRR27069368 MDR-TB lineage4.5 None
SRR27450022 Sensitive La3 None
ERR13249809 Sensitive lineage4.5 None
ERR13249809 Sensitive lineage4.5 None
SRR27450025 Sensitive La3 None
SRR29053539 Sensitive lineage4.3 None
SRR29053539 Sensitive lineage4.3 None
ERR11069001 Sensitive lineage4.1.2.1 None
SRR20969777 MDR-TB lineage4.2.2 None
SRR20969777 MDR-TB lineage4.2.2 None
ERR11049107 Other La3 None
SRR28858747 Sensitive lineage2.2.1.2 None
SRR28858747 Sensitive lineage2.2.1.2 None
ERR11050312 Sensitive lineage4.1.2.1 None
SRR29053325 Sensitive La3 None
SRR21279467 Other lineage2.2.1 None
SRR21279467 Other lineage2.2.1 None
SRR29053271 Sensitive La3 None
ERR9125828 Sensitive La3 None
ERR13260593 Pre-XDR-TB lineage4 None
ERR13260593 Pre-XDR-TB lineage4 None
ERR13291196 Sensitive La3 None
ERR13267604 Sensitive La3 None
ERR11043390 Sensitive La3 None
ERR13291622 Sensitive lineage4.3 None
ERR13291622 Sensitive lineage4.3 None
SRR29053559 Sensitive lineage4.3 None
SRR29053559 Sensitive lineage4.3 None
ERR13262070 Sensitive La3 None
SRR18911232 Sensitive lineage1.2.2.2 None
SRR18911232 Sensitive lineage1.2.2.2 None
ERR4820194 Sensitive La3 None
SRR16058583 Sensitive La3 None
SRR16058583 Sensitive La3 None
ERR13289674 Sensitive La3 None
ERR13260607 Pre-XDR-TB lineage4 None
ERR9125148 Sensitive La3 None
SRR28858579 Sensitive La3 None
SRR16089402 Sensitive La3 None
SRR16057982 Sensitive La3 None
SRR16057982 Sensitive La3 None
ERR4818572 Sensitive La3 None
SRR18495627 Sensitive lineage4.5 None
SRR18495627 Sensitive lineage4.5 None
SRR28859592 Sensitive lineage4.3.3 None
ERR4819164 Sensitive La3 None
ERR4814915 Sensitive La3 None
ERR11050970 Sensitive La3 None
ERR11081198 Other La3 None
ERR11081198 Other La3 None
SRR29052939 Sensitive La3 None
ERR4810569 Sensitive lineage4.5 cn
ERR4815024 Sensitive La3 None
ERR4818708 Sensitive La3 None
ERR4819952 Sensitive La3 None
ERR4820063 Sensitive La3 None
ERR4820543 Sensitive La3 None
ERR553015 Sensitive lineage4.3.1 None
ERR553015 Sensitive lineage4.3.1 None
SRR1172329 HR-TB lineage1.1.2 None
ERR13289975 Sensitive La3 None
SRR1735569 Sensitive La3 None
SRR26112626 Other La3 None
SRR6896301 Sensitive lineage4.3.3 None
SRR7069626 Sensitive La3 None
SRR7069844 Sensitive La3 None
SRR7070245 Sensitive La3 None
SRR7070371 Sensitive La3 None
SRR26112175 Other La3 None
DRR474156 HR-TB lineage4.3.3 None
ERR13291177 Sensitive La3 None
SRR6153221 Sensitive lineage4.2.2 ca
SRR25515143 Sensitive lineage2.2.1 None
SRR10251196 Sensitive La3 None
ERR550730 Sensitive lineage4.3 de
ERR552271 Sensitive lineage2.2.1 de
ERR552438 Sensitive lineage4.5 de
SRR2100577 Sensitive La3 None
SRR2101222 Sensitive La3 None
SRR2101291 Sensitive La3 None
SRR2101329 Sensitive La3 None
SRR3675498 Sensitive La3 gb
ERR4817463 Sensitive La3 gb
ERR4817778 Sensitive La3 gb
ERR4820932 Sensitive La3 gb
ERR2512859 Sensitive La3 gb
ERR2513671 Sensitive La3 gb
SRR6045425 Sensitive La3 gb
SRR6045962 Sensitive La3 gb
ERR1034834 MDR-TB lineage4.1.2.1 pt
DRR474153 HR-TB lineage4.3.3 None
SRR27450478 Sensitive La3 None
SRR16058093 Sensitive La3 None
ERR234676 Sensitive La3 None
ERR13289622 Sensitive lineage4.1.1.1 None
ERR2512788 Sensitive La3 None
ERR2512826 Sensitive La3 None
ERR2515051 Sensitive La3 None
ERR351884 Sensitive La3 None
ERR6375116 HR-TB La3 None
SRR10040338 MDR-TB lineage4.4.2 None
ERR6375115 HR-TB La3 None
ERR6375117 Sensitive La3 None
ERR6375118 Sensitive La3 None
SRR10251185 Sensitive La3 None
SRR10251185 Sensitive La3 None
ERR6375120 Sensitive La3 None
ERR6375119 Sensitive La3 None
ERR6375121 Sensitive La3 None
ERR6375133 Sensitive La3 None
ERR6375134 Sensitive La3 None
ERR6375135 Sensitive La3 None
SRR10251189 Sensitive La3 None
SRR10251189 Sensitive La3 None
ERR6375137 Sensitive La3 None
ERR6375136 Sensitive La3 None
ERR6375138 Sensitive La3 None
SRR10251186 Sensitive La3 None
SRR10251186 Sensitive La3 None
ERR6375139 Sensitive La3 None
ERR6375140 Sensitive La3 None
ERR6375141 Sensitive La3 None
ERR6751578 MDR-TB lineage4.1.2.1 None
SRR10251190 Sensitive La3 None
ERR6375142 Sensitive La3 None
SRR10251190 Sensitive La3 None
SRR10251194 Sensitive La3 None
SRR10251194 Sensitive La3 None
SRR10251198 Sensitive La3 None
SRR10251198 Sensitive La3 None
SRR10251197 Sensitive La3 None
SRR10251197 Sensitive La3 None
SRR10251200 Sensitive La3 None
SRR10251200 Sensitive La3 None
SRR10321152 Sensitive None
SRR29055734 Sensitive lineage4.1.2.1 None
SRR29231281 Sensitive La3 None
SRR5642711 Sensitive La3 None
SRR5642714 Sensitive La3 None
SRR5642714 Sensitive La3 None
SRR5642712 Sensitive La3 None
SRR5642712 Sensitive La3 None
SRR5642715 Other La3 None
SRR5642716 Sensitive La3 None
SRR5642713 Sensitive La3 None
SRR5642718 Sensitive La3 None
SRR5642718 Sensitive La3 None
SRR5642717 Sensitive La3 None
SRR5642717 Sensitive La3 None
ERR13291246 Sensitive La3 None
ERR13291246 Sensitive La3 None
ERR752180 Sensitive lineage2.2.1 th
ERR2510692 MDR-TB lineage4 it
ERR4815417 Other La3 gb
ERR4816913 Sensitive lineage4.6 gb
ERR4816917 Sensitive La3 gb
ERR4821802 Sensitive La3 gb
ERR2514172 Sensitive La3 gb
ERR2514957 Sensitive La3 gb
SRR6045015 Sensitive La3 gb
SRR6045810 Sensitive lineage4.1.1.1 gb
SRR6044858 Sensitive La3 gb
SRR6046695 Sensitive La3 gb
ERR2199741 Sensitive La3 de
ERR2199741 Sensitive La3 de
ERR2199829 Sensitive La3 de
ERR2200114 Sensitive La3 de
SRR25827580 MDR-TB lineage3 None
SRR27450484 Sensitive La3 None
ERR13290040 Sensitive La3 None
ERR234682 Sensitive La3;lineage4 None
ERR2659155 Sensitive La3 None
ERR2659154 Sensitive La3 None
ERR2659156 Sensitive La3 None
ERR6375122 Sensitive La3 None
ERR6375123 Sensitive La3 None
ERR6375126 Sensitive La3 None
ERR6375124 Sensitive La3 None
ERR6375125 Sensitive La3 None
ERR6375127 Sensitive La3 None
SRR10251187 Sensitive La3 None
SRR10251187 Sensitive La3 None
ERR6375129 Sensitive La3 None
ERR6375128 Sensitive La3 None
ERR6375130 Sensitive La3 None
SRR10251188 Sensitive La3 None
SRR10251188 Sensitive La3 None
ERR6375131 Sensitive La3 None
ERR6375132 Sensitive La3 None
SRR10251191 Sensitive La3 None
SRR10251191 Sensitive La3 None
SRR1180135 HR-TB lineage1.1.2 None
SRR10251192 Sensitive La3 None
SRR10251193 Sensitive La3 None
SRR10251195 Sensitive La3 None
SRR10251195 Sensitive La3 None
SRR10251202 Sensitive La3 None
SRR10251202 Sensitive La3 None
SRR10321128 Sensitive La3 None
SRR10251199 Sensitive La3 None
SRR10251199 Sensitive La3 None
SRR10321130 Sensitive La3 None
SRR10321134 Sensitive La3 None
SRR10321134 Sensitive La3 None
SRR1183011 HR-TB lineage1.1.2 None
SRR10321141 Sensitive La3 None
SRR10321143 Other La3 None
SRR10321149 Sensitive La3 None
SRR10321149 Sensitive La3 None
SRR21728710 Sensitive lineage4.1.1.3 None
SRR21674637 Sensitive lineage4.1.2.1 None
ERR13289522 Sensitive La3 None
SRR28170839 Sensitive La3 None
ERR13289696 Sensitive La3 None
SRR30182773 Sensitive La3 None
ERR13260621 Pre-XDR-TB lineage4 None
ERR13260621 Pre-XDR-TB lineage4 None
ERR13291173 Sensitive La3 None
ERR13291173 Sensitive La3 None
ERR1555051 MDR-TB lineage4.1.1.1 None
ERR551065 Sensitive lineage4.3 de
SRR2101146 Sensitive lineage4.2.2 None
SRR2101161 Sensitive La3 None
ERR2517102 Sensitive La3 gb
ERR2516585 Sensitive lineage4.1.2.1 pe
ERR4815064 Sensitive La3 gb
ERR4818160 Sensitive La3 gb
ERR2512533 Sensitive La3 gb
ERR2512389 Sensitive La3 gb
ERR4821317 Sensitive La3 gb
ERR4821662 Sensitive La3 gb
ERR2513195 Sensitive La3 gb
ERR2513625 Sensitive La3 gb
ERR2514578 Sensitive La3 gb
SRR6044939 Sensitive La3 gb
SRR6045301 Sensitive La3 gb
SRR6046725 Sensitive La3 gb
SRR6824480 MDR-TB lineage4.2.2 cn