ERR161122
|
Sensitive
|
lineage1.2.2.1;lineage4.3.4.2
|
mw
|
ERR245663
|
Sensitive
|
lineage2.2.1
|
mw
|
SRR4033727
|
Sensitive
|
lineage2.2.1
|
za
|
SRR6856037
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6079919
|
Sensitive
|
lineage2.2.1.1
|
au
|
SRR4033755
|
Sensitive
|
lineage2.2.1
|
za
|
ERR221536
|
Sensitive
|
lineage2.2.1;lineage4.9
|
mw
|
ERR221632
|
Sensitive
|
lineage2.2.1;lineage4.3.4.2.1
|
mw
|
ERR190368
|
Sensitive
|
lineage2.2.1
|
mw
|
SAMN02053818
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515853
|
Sensitive
|
lineage2.2.1
|
za
|
ERR4817552
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR832998
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6855728
|
Sensitive
|
lineage2.2.1;lineage4.1.1
|
None
|
SRR3725695
|
Sensitive
|
lineage2.2.1
|
None
|
SRR4033731
|
Sensitive
|
lineage2.2.1
|
za
|
SRR4033735
|
Sensitive
|
lineage2.2.1
|
za
|
SRR15600352
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR2515106
|
Sensitive
|
lineage2.2.1
|
za
|
SRR1048854
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR11252604
|
Sensitive
|
lineage2.2.1
|
None
|
SRR4033726
|
Sensitive
|
lineage2.2.1
|
za
|
SRR12882370
|
Sensitive
|
lineage1.2.2.2
|
None
|
ERR2515149
|
Sensitive
|
lineage2.2.1
|
za
|
ERR3276242
|
Sensitive
|
lineage2.2.1
|
nl
|
SRR6856054
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515987
|
Sensitive
|
lineage2.2.1
|
za
|
ERR4809177
|
XDR-TB
|
lineage2.2.1
|
za
|
SRR4033728
|
Sensitive
|
lineage2.2.1
|
za
|
SRR4033729
|
Sensitive
|
lineage2.2.1
|
za
|
ERR10680183
|
MDR-TB
|
lineage4.9
|
None
|
ERR10748176
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8025715
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971115
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10869114
|
Sensitive
|
lineage2.2.1
|
None
|
ERR7737948
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9806832
|
RR-TB
|
lineage2.2.1
|
None
|
ERR2515418
|
Sensitive
|
lineage2.2.1
|
None
|
ERR13285285
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR970461
|
RR-TB
|
lineage2.2.1
|
None
|
SRR16156254
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6855941
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9992656
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR181810
|
Sensitive
|
lineage1.2.2.1
|
mw
|
ERR221544
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR9992752
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR3724938
|
Sensitive
|
lineage2.2.1
|
None
|
ERR970462
|
RR-TB
|
lineage2.2.1
|
None
|
ERR221659
|
Sensitive
|
lineage2.2.1;lineage4.3.4.2.1
|
None
|
SRR1019136
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1013556
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR2515873
|
Sensitive
|
lineage2.2.1
|
za
|
ERR2515719
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
SRR1184318
|
RR-TB
|
lineage2.2.1
|
None
|
ERR2515517
|
Sensitive
|
lineage2.2.1
|
za
|
ERR2516032
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515305
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8025511
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8699766
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8975589
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.1.1
|
None
|
SRR6045989
|
Sensitive
|
lineage2.2.1
|
gb
|
ERR1873532
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR1035065
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
SRR4033723
|
Sensitive
|
lineage2.2.1
|
za
|
SRR6856042
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10869116
|
Sensitive
|
lineage2.2.1
|
None
|
ERR245846
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515447
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515530
|
Sensitive
|
lineage2.2.1
|
za
|
ERR8699768
|
Sensitive
|
lineage2.2.1
|
None
|
SRR29440623
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR7821223
|
Sensitive
|
lineage2.2.1
|
None
|
ERR5987275
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28868408
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR6040103
|
Other
|
lineage2.2.1.1
|
au
|
SRR4033742
|
Sensitive
|
lineage2.2.1
|
za
|
SRR28646083
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR6855709
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6855964
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6856078
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11775353
|
Sensitive
|
lineage2.2.1
|
None
|
ERR10748370
|
RR-TB
|
lineage2.2.1
|
None
|
SRR30146981
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10315549
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10315563
|
Sensitive
|
lineage2.2.1
|
None
|
ERR13292507
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7737805
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18213672
|
Sensitive
|
lineage2.2.1
|
None
|
SRR2101828
|
Sensitive
|
lineage2.2.1
|
None
|
SRR7070441
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9806928
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1873425
|
Other
|
lineage2.2.1
|
None
|
ERR7911577
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR473304
|
Sensitive
|
lineage2.2.1
|
None
|
ERR1023427
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11488387
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2515888
|
Sensitive
|
lineage2.2.1
|
za
|
ERR13289037
|
RR-TB
|
lineage2.2.1
|
None
|
ERR9992694
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR9907770
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10869120
|
RR-TB
|
lineage2.2.1
|
None
|
SRR4033721
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11252452
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6856045
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8975366
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8025621
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971108
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6207273
|
Sensitive
|
lineage2.2.1
|
None
|
ERR13289039
|
RR-TB
|
lineage2.2.1
|
None
|
ERR8699087
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515894
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8774348
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8975040
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8975001
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4896321
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10767001
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR1063867
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6855799
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515223
|
RR-TB
|
lineage2.2.1
|
za
|
ERR9806964
|
RR-TB
|
lineage2.2.1
|
None
|
ERR10610167
|
RR-TB
|
lineage2.2.1
|
None
|
ERR8025707
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6856118
|
Sensitive
|
lineage2.2.1
|
None
|
ERR221628
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR245754
|
Sensitive
|
lineage2.2.1;lineage4.1.2
|
mw
|
ERR2515823
|
Sensitive
|
lineage2.2.1;lineage4.3.2.1
|
None
|
SRR6855939
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8699730
|
RR-TB
|
lineage2.2.1;lineage4.4.1.1
|
None
|
SAMN02350458
|
Sensitive
|
lineage2.2.1
|
za
|
SRR14519721
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR9992872
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR4033752
|
Sensitive
|
lineage2.2.1
|
za
|
ERR181918
|
Sensitive
|
lineage2.2.1
|
mw
|
SAMN02586028
|
RR-TB
|
lineage2.2.1
|
za
|
SRR9971330
|
Sensitive
|
lineage2.2.1
|
None
|
ERR5987277
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22251863
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR6896341
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9807005
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5341267
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR924704
|
Sensitive
|
lineage2.2.1
|
None
|
ERR221605
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR8025523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4811413
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10315527
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8975134
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16156260
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29093748
|
Sensitive
|
lineage2.2.1
|
None
|
ERR400325
|
Sensitive
|
lineage2.2.1.1
|
gb
|
SRR15723143
|
Other
|
lineage2.2.1
|
None
|
ERR8975179
|
Sensitive
|
lineage2.2.1
|
None
|
ERR553241
|
RR-TB
|
lineage2.2.1
|
sz
|
ERR9119901
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR216958
|
Sensitive
|
lineage2.2.1
|
mw
|
SRR10315548
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4011103
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515619
|
Sensitive
|
lineage2.2.1
|
za
|
SRR4033720
|
Sensitive
|
lineage2.2.1
|
za
|
ERR8975752
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR8975408
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11067184
|
Sensitive
|
lineage4.8
|
None
|
ERR221558
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR9806690
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR212126
|
Sensitive
|
lineage2.2.1
|
mw
|
SRR6117323
|
Sensitive
|
lineage2.2.1.1
|
au
|
ERR2515845
|
Sensitive
|
lineage2.2.1
|
za
|
ERR10610217
|
RR-TB
|
lineage2.2.1
|
None
|
ERR2516021
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8686583
|
Sensitive
|
lineage2.2.1
|
None
|
ERR13260461
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR1023468
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9993008
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR7911580
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR8975016
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10748087
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2513434
|
Sensitive
|
lineage2.2.1
|
gb
|
ERR2515238
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR1035050
|
RR-TB
|
lineage2.2.1
|
za
|
SRR29096861
|
Sensitive
|
lineage2.2.1
|
None
|
SRR4033754
|
Sensitive
|
lineage2.2.1
|
za
|
ERR221658
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR4830539
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR221604
|
Sensitive
|
lineage2.2.1
|
None
|
ERR245834
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR2515860
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR11775772
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9992788
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4817977
|
Other
|
lineage4.8
|
gb
|
ERR4820434
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR11811394
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11774971
|
RR-TB
|
lineage2.2.1
|
None
|
SRR28045009
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR12141646
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6855957
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1013555
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR2515309
|
Sensitive
|
lineage2.2.1
|
None
|
ERR245716
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8025513
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8025616
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2515297
|
Sensitive
|
lineage2.2.1
|
None
|
ERR5917985
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6855819
|
Sensitive
|
lineage2.2.1
|
None
|
SRR29093395
|
Sensitive
|
lineage2.2.1
|
None
|
SRR15600383
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR4033747
|
Sensitive
|
lineage2.2.1
|
za
|
SRR6856014
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8025627
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8025604
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.4.1.1
|
None
|
ERR10748297
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2515657
|
Sensitive
|
lineage2.2.1
|
None
|
ERR5758331
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8699814
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8975008
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR8975531
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8975950
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1633822
|
Sensitive
|
lineage2.2.1
|
za
|
ERR221538
|
Sensitive
|
lineage2.2.1
|
mw
|
SRR15600399
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR2516011
|
HR-TB
|
lineage2.2.1
|
za
|
ERR9807026
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR4033750
|
Sensitive
|
lineage2.2.1
|
None
|
SRR9971265
|
RR-TB
|
lineage2.2.1
|
None
|
SRR4033741
|
Sensitive
|
lineage2.2.1
|
za
|
ERR161121
|
Sensitive
|
lineage1.2.2.1
|
mw
|
ERR8699735
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6896347
|
HR-TB
|
lineage2.2.1
|
None
|
SRR16156255
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR9971354
|
RR-TB
|
lineage2.2.1
|
None
|
ERR8025685
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8025705
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10610104
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5918135
|
HR-TB
|
lineage2.2.1
|
za
|
ERR13289295
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR161100
|
Sensitive
|
lineage1.2.2.1
|
mw
|
ERR4809191
|
Other
|
lineage2.2.1
|
za
|
ERR245831
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR4821409
|
Other
|
lineage4.8
|
None
|
ERR9992662
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR8025526
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR4033724
|
Sensitive
|
lineage2.2.1
|
za
|
ERR108147
|
Sensitive
|
lineage2.2.1
|
za
|
SRR9971220
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1140900
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6855719
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16156252
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR245655
|
Sensitive
|
lineage2.2.1
|
mw
|
SRR4033749
|
Sensitive
|
lineage2.2.1
|
za
|
ERR13260457
|
HR-TB
|
lineage2.2.1
|
None
|
SRR4033737
|
Sensitive
|
lineage2.2.1
|
za
|
ERR7737783
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11774985
|
Sensitive
|
lineage2.2.1
|
None
|
SRR4033736
|
Sensitive
|
lineage2.2.1
|
za
|
SRR6982212
|
Sensitive
|
lineage2.2.1
|
None
|
SRR15661604
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR9030380
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21690670
|
Sensitive
|
lineage2.2.1
|
None
|
ERR221603
|
Sensitive
|
lineage2.2.1;lineage4
|
mw
|
SRR958231
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9030293
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6855924
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10315558
|
Sensitive
|
lineage2.2.1
|
None
|
ERR13260776
|
Sensitive
|
lineage2.2.1
|
None
|
ERR5987203
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8975653
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR9971208
|
Sensitive
|
lineage2.2.1
|
None
|
SRR30182694
|
Sensitive
|
lineage2.2.2
|
None
|
SRR1180991
|
Sensitive
|
lineage2.2.1
|
None
|
SAMN02360557
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
SRR1172809
|
Sensitive
|
lineage2.2.1
|
None
|
ERR5987345
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8700348
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1196724
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1180434
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8025549
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR108181
|
Sensitive
|
lineage2.2.1
|
za
|
ERR5987287
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR221574
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR4011099
|
Sensitive
|
lineage2.2.1
|
None
|
SRR4033740
|
Sensitive
|
lineage2.2.1
|
za
|
SRR29056260
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR181916
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR8699229
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9806914
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2515129
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515173
|
MDR-TB
|
lineage2.2.1
|
za
|
ERR2515378
|
Sensitive
|
lineage2.2.1
|
za
|
ERR228192
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8975712
|
RR-TB
|
lineage2.2.1
|
None
|
ERR5758365
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR221630
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR181821
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR8975005
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR6855716
|
Sensitive
|
lineage2.2.1
|
None
|
SRR2101648
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515662
|
Other
|
lineage2.2.1
|
za
|
ERR11488388
|
RR-TB
|
lineage2.2.1
|
None
|
SRR2101308
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6856012
|
Sensitive
|
lineage2.2.1
|
None
|
ERR181769
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR8975833
|
Sensitive
|
lineage2.2.1
|
None
|
ERR221542
|
Sensitive
|
lineage2.2.1
|
mw
|
SRR4033730
|
Sensitive
|
lineage2.2.1
|
za
|
ERR8975211
|
Sensitive
|
lineage2.2.1
|
None
|
SRR5520572
|
Sensitive
|
lineage2.2.1.1;lineage4
|
None
|
SRR10315562
|
Sensitive
|
lineage2.2.1
|
None
|
SRR9971219
|
RR-TB
|
lineage2.2.1
|
None
|
SRR6855835
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10869085
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515301
|
XDR-TB
|
lineage2.2.1
|
za
|
SRR29093852
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6982251
|
RR-TB
|
lineage2.2.1
|
None
|
ERR5758427
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10315489
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8686584
|
Sensitive
|
lineage2.2.1
|
None
|
ERR6052039
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8699212
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8975741
|
RR-TB
|
lineage2.2.1
|
None
|
ERR8975992
|
RR-TB
|
lineage2.2.1
|
None
|
ERR190401
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR2515190
|
Sensitive
|
lineage2.2.1
|
za
|
ERR1035058
|
MDR-TB
|
lineage2.2.1
|
za
|
SRR4033743
|
Sensitive
|
lineage2.2.1
|
za
|
ERR221545
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR10748227
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR245680
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR1035047
|
RR-TB
|
lineage2.2.1
|
za
|
ERR108148
|
Sensitive
|
lineage2.2.1
|
za
|
ERR9120152
|
RR-TB
|
lineage2.2.1
|
None
|
ERR8975680
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6855886
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9120112
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR221553
|
Sensitive
|
lineage2.2.1
|
mw
|
SRR10869195
|
Sensitive
|
lineage2.2.1
|
None
|
ERR163990
|
Sensitive
|
lineage2.2.1
|
mw
|
SRR4033718
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR10869139
|
Sensitive
|
lineage2.2.1
|
None
|
ERR1035078
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR221656
|
Sensitive
|
lineage2.2.1;lineage4.3.4.2.1
|
None
|
SRR6981937
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9120134
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971006
|
Sensitive
|
lineage2.2.1
|
None
|
SRR5341266
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR221652
|
Sensitive
|
lineage2.2.1;lineage4.3.4.2.1
|
mw
|
SRR2101326
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR221633
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR2515240
|
Sensitive
|
lineage2.2.1
|
za
|
ERR2515334
|
Sensitive
|
lineage2.2.1
|
za
|
SRR2101754
|
RR-TB
|
lineage2.2.1
|
None
|
SRR6855740
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4820726
|
Sensitive
|
lineage4.8
|
gb
|
ERR11465807
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6982545
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11252723
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11252422
|
Sensitive
|
lineage2.2.1
|
None
|
ERR5918060
|
Sensitive
|
lineage2.2.1
|
za
|
ERR323119
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR11811436
|
Sensitive
|
lineage2.2.1
|
None
|
ERR13289353
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13289902
|
Sensitive
|
lineage2.2.1
|
None
|
ERR7902670
|
Sensitive
|
lineage1.2.2.1
|
None
|
ERR9806706
|
RR-TB
|
lineage2.2.1
|
None
|
ERR8025535
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13289385
|
HR-TB
|
lineage2.2.1
|
None
|
SRR10869223
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9992821
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR832984
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10315557
|
Sensitive
|
lineage2.2.1
|
None
|
SRR9971257
|
RR-TB
|
lineage2.2.1
|
None
|
ERR11775350
|
HR-TB
|
lineage2.2.1
|
None
|
ERR9907757
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8025750
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8975585
|
HR-TB
|
lineage2.2.1
|
None
|
SRR15600339
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR2101456
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10869095
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1023520
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11043745
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR867544
|
Other
|
lineage4.9
|
None
|
ERR4809029
|
Sensitive
|
lineage2.2.1
|
za
|
SRR6856123
|
HR-TB
|
lineage2.2.1
|
None
|
SRR21732072
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR8237387
|
Sensitive
|
lineage2.2.1.1
|
pg
|
ERR2200051
|
Sensitive
|
lineage2.2.1
|
sz
|
ERR8774567
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2515291
|
Sensitive
|
lineage2.2.1
|
za
|
ERR9120135
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2660484
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6856094
|
Other
|
lineage2.2.1
|
None
|
ERR550739
|
Sensitive
|
lineage2.2.1
|
None
|
ERR5987279
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2101413
|
Sensitive
|
lineage2.2.1
|
None
|
ERR1873477
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR2515279
|
Sensitive
|
lineage2.2.1
|
za
|
ERR11489051
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR245723
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR4817499
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR6982238
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8025594
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR108182
|
Sensitive
|
lineage2.2.1
|
za
|
SRR4033717
|
Sensitive
|
lineage2.2.1
|
za
|
SRR6896560
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1184018
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515689
|
Sensitive
|
lineage2.2.1
|
za
|
ERR8025753
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9993248
|
RR-TB
|
lineage2.2.1
|
None
|
SRR29093866
|
Sensitive
|
lineage2.2.1
|
None
|
SRR29093604
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1013527
|
Other
|
lineage2.2.1
|
None
|
ERR13260773
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11068858
|
Sensitive
|
lineage4.1.2
|
None
|
ERR1023517
|
RR-TB
|
lineage2.2.1
|
None
|
ERR1034658
|
Pre-XDR-TB
|
lineage3
|
bg
|
SAMN02585956
|
Sensitive
|
lineage2.2.1
|
za
|
SRR1180273
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8700389
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9119992
|
RR-TB
|
lineage2.2.1
|
None
|
ERR13260469
|
Sensitive
|
lineage2.2.1
|
None
|
SRR16156259
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13284849
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR2101335
|
Sensitive
|
lineage2.2.1
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
ERR5987250
|
RR-TB
|
lineage2.2.1
|
None
|
SRR6855813
|
Sensitive
|
lineage2.2.1
|
None
|
SRR2100549
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9120111
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8975756
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9119851
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6855712
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10869189
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR4033739
|
Sensitive
|
lineage2.2.1
|
za
|
SRR4033738
|
Sensitive
|
lineage2.2.1
|
za
|
ERR773792
|
Sensitive
|
lineage2.2.1
|
None
|
SRR4033746
|
Sensitive
|
lineage2.2.1
|
za
|
ERR7911543
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR171135
|
Other
|
lineage2.2.1
|
za
|
SAMN02053780
|
Sensitive
|
lineage2.2.1
|
za
|
SRR10315559
|
Sensitive
|
lineage2.2.1
|
None
|
ERR736808
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6153120
|
Sensitive
|
lineage2.2.1
|
ca
|
ERR2515963
|
Sensitive
|
lineage2.2.1
|
za
|
SRR15600345
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR9119982
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4830476
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515935
|
Sensitive
|
lineage2.2.1
|
za
|
ERR4831581
|
RR-TB
|
lineage2.2.1
|
None
|
ERR9907774
|
RR-TB
|
lineage2.2.1
|
None
|
ERR212120
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR9806840
|
RR-TB
|
lineage2.2.1
|
None
|
ERR2515589
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
ERR4816035
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8699737
|
Sensitive
|
lineage2.2.1
|
None
|
SRR4033748
|
Sensitive
|
lineage2.2.1
|
za
|
SRR1175030
|
RR-TB
|
lineage2.2.1
|
None
|
SRR29093701
|
RR-TB
|
lineage2.2.1
|
None
|
SRR4033758
|
Sensitive
|
lineage2.2.1
|
za
|
ERR7737828
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1019132
|
Sensitive
|
lineage2.2.1
|
None
|
SRR30182396
|
Other
|
lineage2.2.1.1
|
None
|
ERR4809218
|
Sensitive
|
lineage2.2.1
|
za
|
ERR495050
|
Sensitive
|
lineage2.2.1
|
None
|
SAMN02350462
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
SRR6855713
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6856000
|
Sensitive
|
lineage2.2.1
|
None
|
SRR4033725
|
Sensitive
|
lineage2.2.1
|
za
|
ERR2515613
|
Sensitive
|
lineage2.2.1;lineage4.1.1.3
|
za
|
ERR2515661
|
MDR-TB
|
lineage2.2.1
|
za
|
ERR9806839
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6855733
|
Sensitive
|
lineage2.2.1
|
None
|
ERR7821170
|
Sensitive
|
lineage2.2.1
|
None
|
ERR5918115
|
Pre-XDR-TB
|
lineage2.2.1
|
za
|
SRR9971015
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8975067
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8975339
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8975623
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2515786
|
Sensitive
|
lineage2.2.1
|
za
|
ERR279519
|
Sensitive
|
lineage2.2.1
|
None
|
ERR10748226
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10610202
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR5987398
|
RR-TB
|
lineage2.2.1
|
None
|
SRR6856086
|
Sensitive
|
lineage2.2.1
|
None
|
ERR221655
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR8700385
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8975427
|
Sensitive
|
lineage2.2.1
|
None
|
SRR4033751
|
Sensitive
|
lineage2.2.1
|
za
|
SRR4033719
|
Sensitive
|
lineage2.2.1
|
za
|
SRR4033744
|
Sensitive
|
lineage2.2.1
|
za
|
ERR10748183
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6982236
|
Sensitive
|
lineage2.2.1
|
None
|
ERR245710
|
Sensitive
|
lineage2.2.1
|
mw
|
SRR16151368
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10869149
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9807041
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9119993
|
RR-TB
|
lineage2.2.1
|
None
|
ERR8686585
|
Sensitive
|
lineage2.2.1
|
None
|
ERR6052044
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9993231
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR12141645
|
Sensitive
|
lineage2.2.1
|
None
|
ERR221629
|
Sensitive
|
lineage2.2.1
|
mw
|
SRR2101309
|
HR-TB
|
lineage2.2.1
|
None
|
ERR7737892
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4817630
|
Sensitive
|
lineage2.2.1
|
gb
|
ERR10610185
|
RR-TB
|
lineage2.2.1
|
None
|
ERR9806969
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR4033732
|
Sensitive
|
lineage2.2.1
|
za
|
ERR9806970
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6052074
|
Sensitive
|
lineage2.2.1
|
None
|
ERR1023519
|
RR-TB
|
lineage2.2.1
|
None
|
ERR2515771
|
Sensitive
|
lineage2.2.1
|
za
|
ERR4831572
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9120151
|
RR-TB
|
lineage2.2.1
|
None
|
SRR4033753
|
Sensitive
|
lineage2.2.1
|
za
|
SRR6896200
|
Sensitive
|
lineage2.2.1
|
None
|
ERR13261211
|
Sensitive
|
lineage3.1.2.1
|
None
|
ERR972803
|
RR-TB
|
lineage2.2.1
|
None
|