Rv3246c - c.307_309delATCinsGG
Drug resistance types
11 Sensitive
3 RR-TB
57 HR-TB
10 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 72 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage1;lineage4.9 | 1 |
| La3;lineage4.9 | 8 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.2.1 | 8 |
| La1;lineage4.9 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La3;lineage4 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage2.1 | 1 |
| lineage2.2.1.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| 1 | |
| La3;M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 115 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6866639 | HR-TB | lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR971389 | Other | lineage4.9 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR1180996 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR926164 | Other | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR1063896 | HR-TB | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None |
|---|
