Rv3547 - p.Glu83Asp
Drug resistance types
79 Sensitive
2 RR-TB
56 HR-TB
89 MDR-TB
26 Pre-XDR-TB
1 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1.1 | 233 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1;lineage4.2.1.1;lineage4.8 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| lineage4.2.1.1;lineage4.7 | 3 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage2.2.1;lineage4.2.1.1 | 7 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 266 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14782095 | HR-TB | lineage4.2.1.1 | None | SRR23340068 | MDR-TB | lineage4.2.1.1 | None | ERR5864521 | MDR-TB | lineage4.2.1.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR14802213 | MDR-TB | lineage4.2.1.1 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR144569 | Sensitive | lineage4.2.1.1 | ru | SRR18714960 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR11067583 | HR-TB | lineage4.2.1.1 | None | SRR18715118 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR29539242 | MDR-TB | lineage4.2.1.1 | None | SRR29539037 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR5864525 | MDR-TB | lineage4.2.1.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR7070638 | HR-TB | lineage4.2.1.1 | None | ERR11082279 | MDR-TB | lineage4.2.1.1 | None | ERR12549653 | Sensitive | lineage4.2.1.1 | None | ERR137196 | MDR-TB | lineage4.2.1.1 | ru | ERR11043657 | MDR-TB | lineage4.2.1.1 | None | ERR2987807 | Sensitive | lineage4.2.1.1 | None | SRR6832772 | Sensitive | lineage4.2.1.1 | None | ERR403280 | HR-TB | lineage4.2.1.1 | None | ERR4828777 | MDR-TB | lineage4.2.1.1 | None | ERR5866227 | MDR-TB | lineage4.2.1.1 | None | ERR2600598 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR7646029 | HR-TB | lineage4.2.1.1 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR24256365 | MDR-TB | lineage4.2.1.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR24255983 | MDR-TB | lineage4.2.1.1 | None | ERR2987811 | Sensitive | lineage4.2.1.1 | None | ERR11083104 | Sensitive | lineage4.2.1.1 | None | SRR6832197 | MDR-TB | lineage4.2.1.1 | None | SRR6832511 | Sensitive | lineage4.2.1.1 | None | ERR144565 | HR-TB | lineage4.2.1.1 | ru | ERR5864520 | MDR-TB | lineage4.2.1.1 | None | ERR2704709_ERR2704694 | Sensitive | lineage4.2.1.1 | None | ERR4817313 | HR-TB | lineage4.2.1.1 | None | ERR5864526 | MDR-TB | lineage4.2.1.1 | None | SRR18715173 | Sensitive | lineage4.2.1.1 | None | ERR13273280 | Other | lineage4.2.1.1 | None | SRR23310988 | MDR-TB | lineage4.2.1.1 | None | SRR23340066 | MDR-TB | lineage4.2.1.1 | None | SRR23340030 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR29539275 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR24256311 | MDR-TB | lineage4.2.1.1 | None | SRR29539617 | HR-TB | lineage4.2.1.1 | None | SRR5153811 | MDR-TB | lineage4.2.1.1 | None | ERR10465750 | Sensitive | lineage4.2.1.1 | None | ERR10465848 | HR-TB | lineage4.2.1.1 | None | ERR4816108 | Sensitive | lineage4.2.1.1 | None | SRR23340038 | XDR-TB | lineage4.2.1.1 | None | ERR4830588 | Sensitive | lineage4.2.1.1 | tm | ERR4819757 | HR-TB | lineage4.2.1.1 | gb | ERR11068066 | Sensitive | lineage4.2.1.1 | None | SRR5153316 | MDR-TB | lineage4.2.1.1 | None | ERR11049852 | Sensitive | lineage4.2.1.1 | None | SRR6832820 | HR-TB | lineage4.2.1.1 | None | SAMN02419605 | Sensitive | lineage4.2.1.1 | by | SRR29539597 | Sensitive | lineage4.2.1.1 | None | SRR6785529 | Sensitive | lineage4.2.1.1 | None | SRR23862008 | Sensitive | lineage4.2.1.1 | None | SRR25395665 | Sensitive | lineage4.2.1.1 | None | SRR29539043 | MDR-TB | lineage4.2.1.1 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR8773777 | HR-TB | lineage4.2.1.1 | None | ERR403299 | HR-TB | lineage2.2.1;lineage4.2.1.1;lineage4.8 | None | ERR1140799 | Sensitive | lineage4.2.1.1 | None | ERR2516535 | MDR-TB | lineage4.2.1.1 | nl | ERR2987806 | Sensitive | lineage4.2.1.1 | None | SRR14782628 | HR-TB | lineage4.2.1.1 | None | SRR29539555 | MDR-TB | lineage4.2.1.1 | None | ERR2514974 | HR-TB | lineage4.2.1.1 | gb | ERR4821291 | HR-TB | lineage4.2.1.1 | gb | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR29539108 | HR-TB | lineage4.2.1.1 | None | SRR6831834 | Sensitive | lineage4.2.1.1 | None | SRR7645822 | Sensitive | lineage4.2.1.1 | None | SRR7069720 | HR-TB | lineage4.2.1.1 | None | SRR16088576 | MDR-TB | lineage4.2.1.1 | None | ERR2516473 | MDR-TB | lineage4.2.1.1 | nl | ERR3639808 | MDR-TB | lineage4.2.1.1 | None | SRR6832594 | MDR-TB | lineage4.2.1.1 | None | SRR14801883 | HR-TB | lineage4.2.1.1 | None | SRR29539299 | MDR-TB | lineage4.2.1.1 | None | SRR23339969 | Sensitive | lineage4.2.1.1 | None | SRR5709752 | Pre-XDR-TB | lineage4.2.1.1 | th | ERR4820663 | Sensitive | lineage4.2.1.1 | gb | ERR4815129 | HR-TB | lineage4.2.1.1 | gb | ERR4827717 | Sensitive | lineage4.2.1.1;lineage4.7 | None | ERR2600486 | MDR-TB | lineage4.2.1.1 | None | ERR11082302 | MDR-TB | lineage4.2.1.1 | None | SRR7755703 | HR-TB | lineage4.2.1.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR5866078 | MDR-TB | lineage4.2.1.1 | None | ERR5864523 | MDR-TB | lineage4.2.1.1 | None | SRR6831813 | HR-TB | lineage4.2.1.1 | None | SRR23340031 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR1163096 | Sensitive | lineage4.2.1.1 | None | SRR18714971 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR5865846 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR2516347 | MDR-TB | lineage4.2.1.1 | be | SRR6485111 | Sensitive | lineage4.2.1.1 | None | SRR6832717 | Sensitive | lineage4.2.1.1 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR403319 | Sensitive | lineage4.2.1.1 | None | SRR6832453 | HR-TB | lineage4.2.1.1 | None | ERR8665965 | MDR-TB | lineage4.2.1.1 | None | SRR6831921 | MDR-TB | lineage4.2.1.1 | None | ERR5866079 | MDR-TB | lineage4.2.1.1 | None | SRR24256003 | MDR-TB | lineage4.2.1.1 | None | SRR1172184 | Sensitive | lineage4.2.1.1 | None | ERR11043789 | MDR-TB | lineage4.2.1.1 | None | ERR2987810 | Sensitive | lineage4.2.1.1 | None | ERR13284274 | MDR-TB | lineage4.2.1.1 | None | ERR13290225 | HR-TB | lineage4.2.1.1;lineage4.7 | None | SRR6831914 | HR-TB | lineage4.2.1.1 | None | SRR18714883 | HR-TB | lineage4.2.1.1 | None | ERR2987808 | Sensitive | lineage4.2.1.1 | None | SRR10397181 | MDR-TB | lineage4.2.1.1 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR5864522 | MDR-TB | lineage4.2.1.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR14782250 | Sensitive | lineage4.2.1.1 | None | ERR4820364 | HR-TB | lineage4.2.1.1 | gb | SRR18715333 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None | SRR29539091 | MDR-TB | lineage4.2.1.1 | None | SRR29539611 | HR-TB | lineage4.2.1.1 | None | SRR29681266 | MDR-TB | lineage4.2.1.1 | None | SRR29681307 | Sensitive | lineage4.2.1.1 | None | SRR29538954 | Sensitive | lineage4.2.1.1 | None | SRR29539048 | HR-TB | lineage4.2.1.1 | None | SRR29539807 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR29681274 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR29539298 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR6045052 | HR-TB | lineage4.2.1.1 | None | ERR108509 | Sensitive | lineage4.2.1.1 | ru | ERR484734 | HR-TB | lineage4.2.1.1 | None | ERR234177 | Sensitive | lineage4.2.1.1 | de | ERR11067353 | Sensitive | lineage4.2.1.1 | None | SRR1163347 | Sensitive | lineage4.2.1.1 | None | ERR4815811 | Other | lineage4.2.1.1 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR13232729 | MDR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR6832301 | MDR-TB | lineage4.2.1.1 | None | SRR24256078 | MDR-TB | lineage4.2.1.1 | None | SRR24256185 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR11080862 | MDR-TB | lineage4.2.1.1 | None | SRR6832073 | HR-TB | lineage4.2.1.1 | None | ERR11049688 | Sensitive | lineage4.2.1.1 | None | ERR4818954 | HR-TB | lineage4.2.1.1 | None | ERR13275927 | HR-TB | lineage4.2.1.1 | None | ERR5866225 | MDR-TB | lineage4.2.1.1 | None | SRR16087878 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR11067352 | Sensitive | lineage4.2.1.1 | None | ERR3132254 | HR-TB | lineage4.2.1.1 | None | SRR6832548 | MDR-TB | lineage4.2.1.1 | None | SRR16088554 | HR-TB | lineage4.2.1.1 | None | SRR3085317 | MDR-TB | lineage4.2.1.1 | None | SRR6485068 | Sensitive | lineage4.2.1.1 | None | SRR16088345 | MDR-TB | lineage4.2.1.1 | None | ERR133943 | HR-TB | lineage4.2.1.1 | ru | SRR6831856 | HR-TB | lineage4.2.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR028331 | Sensitive | lineage4.2.1.1 | None | SRR1169054 | Sensitive | lineage4.2.1.1 | None | SRR23340060 | MDR-TB | lineage4.2.1.1 | None | SRR14807645 | Sensitive | lineage4.2.1.1 | None | SAMEA4791118 | Sensitive | lineage4.2.1.1 | de | SRR7646010 | Sensitive | lineage4.2.1.1 | None | SRR18715071 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR16088133 | HR-TB | lineage4.2.1.1 | None | ERR8773775 | HR-TB | lineage4.2.1.1 | None | ERR13276034 | Sensitive | lineage4.2.1.1 | None | ERR11068535 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1.1 | None | SRR29539142 | Sensitive | lineage4.2.1.1 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR6485165 | MDR-TB | lineage4.2.1.1 | None | SRR6832684 | MDR-TB | lineage4.2.1.1 | None | ERR5864524 | MDR-TB | lineage4.2.1.1 | None | SRR18715237 | Sensitive | lineage4.2.1.1 | None | ERR11049601 | Sensitive | lineage4.2.1.1 | None | SRR16087911 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR6785433 | MDR-TB | lineage4.2.1.1 | None | ERR2516811 | MDR-TB | lineage4.2.1.1 | gb | SRR6832812 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR2517029 | MDR-TB | lineage4.2.1.1 | gb | ERR234626 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None | ERR1140780 | Sensitive | lineage4.2.1.1 | None | SRR23339946 | Sensitive | lineage4.2.1.1 | None | ERR2514120 | HR-TB | lineage4.2.1.1 | gb | ERR11080875 | MDR-TB | lineage4.2.1.1 | None | SRR21690068 | Sensitive | lineage4.2.1.1 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR13276014 | HR-TB | lineage4.2.1.1 | None | ERR5864527 | MDR-TB | lineage4.2.1.1 | None | SRR28239669 | HR-TB | lineage4.2.1.1 | None | SRR6831990 | Sensitive | lineage4.2.1.1 | None | ERR4816240 | Sensitive | lineage4.2.1.1 | None | SRR24255946 | MDR-TB | lineage4.2.1.1 | None | ERR4821277 | Sensitive | lineage4.2.1.1 | gb | SRR6046130 | HR-TB | lineage4.2.1.1;lineage4.7 | None | ERR11081017 | Sensitive | lineage4.2.1.1 | None | ERR11068642 | MDR-TB | lineage4.2.1.1 | None | SRR24255929 | Sensitive | lineage4.2.1.1 | None | SRR29681213 | MDR-TB | lineage4.2.1.1 | None | SRR16088405 | MDR-TB | lineage4.2.1.1 | None | SRR18715324 | HR-TB | lineage4.2.1.1 | None | ERR5917752 | MDR-TB | lineage4.2.1.1 | by | ERR11082893 | MDR-TB | lineage4.2.1.1 | None | SRR6832283 | Sensitive | lineage4.2.1.1 | None | SRR14782659 | HR-TB | lineage4.2.1.1 | None | SRR14802201 | HR-TB | lineage4.2.1.1 | None | ERR2516379 | Sensitive | lineage4.2.1.1 | be | SRR6485022 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR6485070 | Sensitive | lineage4.2.1.1 | None | ERR2199861 | Sensitive | lineage4.2.1.1 | de | SRR24256340 | MDR-TB | lineage4.2.1.1 | None | SRR6785389 | HR-TB | lineage4.2.1.1 | None | SRR24256198 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR14782408 | Sensitive | lineage4.2.1.1 | None | ERR551531 | Sensitive | lineage4.2.1.1 | cg | ERR5866226 | MDR-TB | lineage4.2.1.1 | None | SRR5710017 | Pre-XDR-TB | lineage4.2.1.1 | th | SRR1180147 | Other | lineage2.2.1.1 | None | ERR11082429 | MDR-TB | lineage4.2.1.1 | None | SRR14801814 | MDR-TB | lineage4.2.1.1 | None | SRR6785183 | Sensitive | lineage4.2.1.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6831850 | Sensitive | lineage4.2.1.1 | None | SRR18715041 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR7070067 | HR-TB | lineage4.2.1.1 | None | ERR551530 | Sensitive | lineage4.2.1.1 | cg | SRR6484981 | HR-TB | lineage4.2.1.1 | None | SRR5153219 | MDR-TB | lineage4.2.1.1 | None | ERR2510882 | Pre-XDR-TB | lineage4.2.1.1 | it | ERR11042993 | Sensitive | lineage4.2.1.1 | None | SRR29538890 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None | SRR29538953 | Sensitive | lineage4.2.1.1 | None | SRR29539126 | MDR-TB | lineage4.2.1.1 | None | SRR29681264 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1.1 | None | ERR067657 | MDR-TB | lineage4.2.1.1 | ru | ERR10465767 | Sensitive | lineage4.2.1.1 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR6257086 | MDR-TB | lineage4.2.1.1 | ru | ERR13273279 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None | ERR2704694 | Sensitive | lineage4.2.1.1 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR8665966 | MDR-TB | lineage4.2.1.1 | None | SRR14801471 | HR-TB | lineage4.2.1.1 | None | SRR11033632 | Sensitive | lineage4.2.1.1 | None | SRR14782579 | HR-TB | lineage4.2.1.1 | None | SRR14801508 | Sensitive | lineage4.2.1.1 | None | ERR4827508 | Sensitive | lineage4.2.1.1 | None | ERR11798649 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR13284327 | MDR-TB | lineage4.2.1.1 | None | ERR067597 | Sensitive | lineage4.2.1.1 | ru | SRR6785398 | HR-TB | lineage4.2.1.1 | None | SRR6832539 | Sensitive | lineage4.2.1.1 | None | SRR6832510 | HR-TB | lineage4.2.1.1 | None | SRR8758890 | MDR-TB | lineage4.2.1.1 | None | ERR234567 | HR-TB | lineage2.2.1;lineage4.2.1.1 | None | SRR6832218 | Sensitive | lineage4.2.1.1 | None |
|---|
