Rv3596c - c.2020_2022delTCTinsAGC
Drug resistance types
5 Sensitive
1 RR-TB
7 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 5 |
| La1;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage2.2.1 | 1 |
| La1.7;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage4 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.8.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 21 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR1791747 | Other | La1.8.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None |
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