Rv3596c - c.865_867delCTGinsAC
Drug resistance types
2 Sensitive
16 RR-TB
3 HR-TB
5 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 4 |
| lineage4.9 | 12 |
| lineage4.8 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2;lineage4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.4.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.4 | 1 |
| lineage4.1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage3 | 1 |
| 1 | |
| lineage2.2.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 41 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4821143 | Other | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4821334 | Other | lineage4.1.3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR28351444 | MDR-TB | lineage3 | None | ERR4817069 | RR-TB | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None |
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