Rv3794 - c.-43G>C


Drug resistance types
4 Sensitive 6 RR-TB 34 HR-TB 393 MDR-TB 232 Pre-XDR-TB 15 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.3 1
lineage2.2.1 206
lineage3 38
lineage4.1.2.1 18
lineage4.1.1.3 10
lineage4 2
lineage4.8 5
lineage4.4.1.1 178
lineage4.3.4.1 5
lineage4.3.4.2 25
lineage4.3.4.2.1 4
lineage4.3.3 9
lineage4.2.1.1 33
lineage2.2.1.1 48
lineage4.3.2.1 2
lineage4.6.1.2 8
lineage2.1 4
lineage2.2 3
lineage3.1.2 6
lineage2.2.1.2 2
lineage3.1.1 3
lineage4.2.2.2 5
lineage3.1.2.1 1
lineage1.1.2 3
lineage4.7 16
lineage4.6.4 2
lineage4.1.1 2
lineage4.6.2.2 8
lineage4.1.2 1
lineage2.2.2 3
lineage4.5 1
lineage4.8;lineage4.4.1.1 1
8
lineage4.2.2 1
lineage1.1.1 1
lineage4.3.2 5
lineage4.6.1;lineage2.2.1.1 4
lineage4.2.1.1;lineage2.2.1 1
lineage1.2.2.2 2
lineage4.4.2 1
lineage4.2.1.1;lineage2.2 1
lineage3;lineage2.2.1.2;lineage2.2.1.1 1
lineage4.9;lineage3;lineage2.2.1 1
lineage3;lineage1.2.2.2 2
lineage3;lineage2.2.1.1 2
lineage4.1.1.1;lineage3;lineage2.2.1.1 1
spoligotype Counts
spoligotype Count
None 684
Geographic prevalence
Country level data for this variant is available for 166 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1034672 MDR-TB lineage4.3 co
SRR671759 Pre-XDR-TB lineage2.2.1 cn
ERR245747 HR-TB lineage3 mw
ERR1034583 Pre-XDR-TB lineage3 pk
SRR671781 Pre-XDR-TB lineage2.2.1 cn
ERR1034681 MDR-TB lineage4.1.2.1 co
SRR6824649 MDR-TB lineage2.2.1 cn
ERR551692 Pre-XDR-TB lineage4.1.1.3 sz
ERR4812827 MDR-TB lineage4 None
SRR6824632 RR-TB lineage2.2.1 cn
SRR6824559 MDR-TB lineage2.2.1 cn
ERR2041769 Pre-XDR-TB lineage4.8 rs
ERR550619 Pre-XDR-TB lineage4.1.1.3 sz
SAMN02586004 MDR-TB lineage4.4.1.1 za
ERR1035258 Pre-XDR-TB lineage4.1.2.1 br
SRR5341326 MDR-TB lineage3 in
SAMN02350474 MDR-TB lineage4.4.1.1 za
ERR1034596 Pre-XDR-TB lineage3 pk
ERR1035260 Pre-XDR-TB lineage4.1.2.1 br
SRR1723555 MDR-TB lineage2.2.1 cn
SAMN02350492 Pre-XDR-TB lineage4.4.1.1 za
SAMN02586000 MDR-TB lineage4.4.1.1 za
ERR1034764 MDR-TB lineage4.3.4.1 pe
ERR1034784 Pre-XDR-TB lineage4.3.4.2 pe
SAMN02419591 Pre-XDR-TB lineage2.2.1 by
SRR5065407 MDR-TB lineage2.2.1 vn
SAMN02419685 MDR-TB lineage2.2.1 by
SAMN02419536 MDR-TB lineage2.2.1 by
SAMN02053771 MDR-TB lineage4.4.1.1 za
SAMN02419636 Pre-XDR-TB lineage2.2.1 by
SRR7517735 MDR-TB lineage4.3.4.2 ch
SAMN02419560 MDR-TB lineage2.2.1 by
SAMN02053755 MDR-TB lineage4.4.1.1 za
SAMN02053774 MDR-TB lineage4.4.1.1 za
SRR847797 Pre-XDR-TB lineage4.4.1.1 za
ERR2433011 MDR-TB lineage4.3.4.2.1 None
ERR751751 MDR-TB lineage2.2.1 th
ERR1023399 MDR-TB lineage4.3.3 None
SRR5073631 MDR-TB lineage2.2.1 vn
ERR067611 MDR-TB lineage2.2.1 ru
SRR5153278 Pre-XDR-TB lineage2.2.1 None
ERR552539 MDR-TB lineage3 de
SRR5153316 MDR-TB lineage4.2.1.1 None
ERR751560 Pre-XDR-TB lineage4.3.4.2 pe
SRR5153811 MDR-TB lineage4.2.1.1 None
ERR7911159 MDR-TB lineage2.2.1.1 vn
ERR1193880 Pre-XDR-TB lineage4.3.2.1 za
SAMN02586002 MDR-TB lineage4.4.1.1 za
ERR2515554 MDR-TB lineage4.1.2.1 None
ERR1199102 MDR-TB lineage4.6.1.2 cd
ERR7911305 MDR-TB lineage2.2.1 vn
ERR7911290 MDR-TB lineage2.1 vn
ERR7911437 MDR-TB lineage4.4.1.1 za
ERR7911203 MDR-TB lineage4.4.1.1 za
ERR7911191 MDR-TB lineage4.1.2.1 za
ERR7911438 MDR-TB lineage4.4.1.1 za
SAMN02414906 MDR-TB lineage4.3.3 se
ERR7911446 MDR-TB lineage4.4.1.1 za
SAMN02403494 MDR-TB lineage4.4.1.1 za
ERR1199096 MDR-TB lineage4.6.1.2 cd
SAMN02403495 MDR-TB lineage4.4.1.1 za
ERR4819920 MDR-TB lineage3 None
SAMN02403514 Pre-XDR-TB lineage4.4.1.1 za
ERR2707107 MDR-TB lineage4.3.4.2 cd
SAMN02586037 MDR-TB lineage4.4.1.1 za
ERR2707057 MDR-TB lineage4.6.1.2 cd
ERR2707204 MDR-TB lineage4.3.4.2 cd
ERR2707053 MDR-TB lineage4.6.1.2 cd
ERR2707172 MDR-TB lineage4.3.4.2 cd
ERR2707123 MDR-TB lineage4.6.1.2 cd
ERR2707225 MDR-TB lineage4.3.4.2 cd
SAMN02403535 MDR-TB lineage4.4.1.1 za
SAMN02403580 MDR-TB lineage4.4.1.1 za
ERR2707210 MDR-TB lineage4.3.4.2 cd
ERR2707081 MDR-TB lineage4.3.4.2 cd
ERR2706959 MDR-TB lineage4.6.1.2 cd
SAMN02403515 MDR-TB lineage4.4.1.1 za
ERR2707136 MDR-TB lineage4.3.4.2 cd
ERR040127 MDR-TB lineage4.6.1.2 ug
SAMN02403581 MDR-TB lineage4.4.1.1 za
ERR1199128 MDR-TB lineage4.6.1.2 cd
SRR5535861 MDR-TB lineage2.2.1.1 None
SRR5486904 MDR-TB lineage4.4.1.1 None
ERR2653084 MDR-TB lineage4.4.1.1 None
ERR4822285 XDR-TB lineage2.2.1 None
ERR2653148 Pre-XDR-TB lineage4.1.2.1 None
ERR2653198 Pre-XDR-TB lineage4.4.1.1 None
SRR5535924 MDR-TB lineage2.2.1.1 None
SRR23311018 Pre-XDR-TB lineage2.2 None
SRR5535930 MDR-TB lineage2.2.1 None
SRR23310911 MDR-TB lineage2.2 None
SRR23340004 Sensitive lineage4.1.2.1 None
ERR4827928 RR-TB lineage2.2.1 None
ERR144566 MDR-TB lineage2.2.1 ru
ERR4828008 HR-TB lineage2.2.1 None
ERR4828009 HR-TB lineage2.2.1 None
SRR5817465 Pre-XDR-TB lineage2.2.1.1 None
SRR5817462 Pre-XDR-TB lineage2.2.1 None
ERR2517001 MDR-TB lineage4.1.2.1 gb
ERR1213887 Pre-XDR-TB lineage2.2.1.1 np
ERR2517096 MDR-TB lineage2.2.1 gb
ERR4798942 XDR-TB lineage3.1.2 in
ERR4797908 Pre-XDR-TB lineage2.2.1 in
ERR4796398 Pre-XDR-TB lineage2.2.1.1 in
ERR2516392 MDR-TB lineage3 be
ERR2516213 Pre-XDR-TB lineage2.2.1 be
ERR2516329 MDR-TB lineage4.3.4.2 be
ERR2516519 MDR-TB lineage2.2.1 nl
ERR4822360 MDR-TB lineage2.2.1 None
ERR3335740 Pre-XDR-TB lineage3 pk
ERR4798155 Pre-XDR-TB lineage2.2.1.1 in
ERR4798063 Pre-XDR-TB lineage2.2.1.2 in
ERR4798364 Pre-XDR-TB lineage3 in
ERR4796528 Pre-XDR-TB lineage2.2.1 in
ERR2245301 MDR-TB lineage3.1.1 no
ERR4796449 Pre-XDR-TB lineage2.2.1.1 in
ERR2516463 Pre-XDR-TB lineage4.3.4.2 pe
ERR4796542 Pre-XDR-TB lineage4.2.2.2 in
ERR2516478 Pre-XDR-TB lineage4.3.4.2 pe
ERR4796837 MDR-TB lineage3 in
ERR4798428 MDR-TB lineage2.2.1.1 in
ERR4799862 Pre-XDR-TB lineage2.2.1.1 in
ERR4798102 Pre-XDR-TB lineage3 in
ERR4798295 Pre-XDR-TB lineage2.2.1.1 in
ERR4796825 MDR-TB lineage2.2.1 in
ERR4796876 MDR-TB lineage3.1.2.1 in
ERR4810478 Pre-XDR-TB lineage2.2.1 cn
ERR4798455 Pre-XDR-TB lineage2.2.1.2 in
ERR4796908 Pre-XDR-TB lineage2.2.1 in
ERR4797358 Pre-XDR-TB lineage3 in
SRR6458383 Pre-XDR-TB lineage2.2.1 None
SRR8651649 Pre-XDR-TB lineage2.2.1 cn
ERR4799231 HR-TB lineage2.2.1.1 in
ERR4797173 Pre-XDR-TB lineage4.2.2.2 in
SRR6458392 Pre-XDR-TB lineage2.2.1 None
SRR8651645 Pre-XDR-TB lineage2.2.1 cn
SRR6458455 MDR-TB lineage2.2.1 None
SRR6480602 Pre-XDR-TB lineage2.2.1 None
ERR4797297 Pre-XDR-TB lineage2.2.1 in
SRR6485165 MDR-TB lineage4.2.1.1 None
ERR4798318 Pre-XDR-TB lineage3.1.2 in
SRR8651598 Pre-XDR-TB lineage2.2.1 cn
ERR4822307 MDR-TB lineage3 de
ERR4831012 Pre-XDR-TB lineage2.2.1.1 np
ERR4799352 Pre-XDR-TB lineage2.2.1.1 in
ERR4799516 MDR-TB lineage2.2.1.1 in
ERR4799502 Pre-XDR-TB lineage2.2.1.1 in
ERR4799743 Pre-XDR-TB lineage2.2.1.1 in
ERR4799658 Pre-XDR-TB lineage2.2.1.1 in
ERR4799903 Pre-XDR-TB lineage3.1.2 in
ERR4799999 MDR-TB lineage2.2.1.1 in
ERR3077943 MDR-TB lineage1.1.2 None
ERR2510882 Pre-XDR-TB lineage4.2.1.1 it
ERR3077945 MDR-TB lineage2.2.1.1 None
ERR4800081 Pre-XDR-TB lineage2.2.1.1 in
ERR4813535 MDR-TB lineage4.3.4.2 pe
ERR4872039 XDR-TB lineage4.7 None
ERR4872040 Pre-XDR-TB lineage4.7 None
ERR4872045 Pre-XDR-TB lineage4.7 None
ERR4872038 Pre-XDR-TB lineage4.7 None
ERR4872041 Pre-XDR-TB lineage4.7 None
ERR4872037 Pre-XDR-TB lineage4.7 None
ERR4872042 XDR-TB lineage4.7 None
ERR4872043 Pre-XDR-TB lineage4.7 None
ERR4872044 XDR-TB lineage4.7 None
ERR4813394 MDR-TB lineage4.3.4.1 pe
ERR4872049 Pre-XDR-TB lineage4.7 None
ERR4872047 XDR-TB lineage4.7 None
ERR4872102 MDR-TB lineage4.6.4 None
ERR4831434 Pre-XDR-TB lineage3 None
ERR4872048 XDR-TB lineage4.7 None
ERR4872046 XDR-TB lineage4.7 None
ERR4872185 MDR-TB lineage4.1.1 None
ERR4872162 MDR-TB lineage4.6.2.2 None
ERR4872163 MDR-TB lineage4.6.2.2 None
ERR5917720 MDR-TB lineage2.2.1 by
ERR4872240 MDR-TB lineage4.6.2.2 None
ERR502248 MDR-TB lineage3 None
SRR6856071 Pre-XDR-TB lineage4.1.1.3 None
SRR6832004 Sensitive lineage2.2.1 None
SRR6832152 Sensitive lineage2.2.1 None
SRR6785408 Pre-XDR-TB lineage2.2.1 None
SRR6789620 MDR-TB lineage2.2.1 None
SRR6785433 MDR-TB lineage4.2.1.1 None
SRR6832288 Pre-XDR-TB lineage2.2.1 None
SRR6832301 MDR-TB lineage4.2.1.1 None
SRR6785511 MDR-TB lineage2.2.1 None
SRR6832548 MDR-TB lineage4.2.1.1 None
SRR6789637 MDR-TB lineage2.2.1 None
ERR4829142 Pre-XDR-TB lineage2.2.1 pk
SRR6832812 Pre-XDR-TB lineage4.2.1.1 None
ERR11465531 MDR-TB lineage2.2.1 None
ERR11067395 HR-TB lineage3.1.1 None
SRR6832684 MDR-TB lineage4.2.1.1 None
ERR2510478 Pre-XDR-TB lineage3 pk
ERR4831525 Pre-XDR-TB lineage3 pk
ERR3287767 MDR-TB lineage4.3.4.2 pe
ERR2510400 Pre-XDR-TB lineage4.2.2.2 pk
ERR4831497 Pre-XDR-TB lineage3 pk
ERR3287394 Pre-XDR-TB lineage4.3.4.2 pe
ERR2510245 MDR-TB lineage3 pk
ERR3287838 Pre-XDR-TB lineage4.3.4.2 pe
ERR2510342 Pre-XDR-TB lineage3 pk
ERR2510305 MDR-TB lineage2.2.1.1 pk
ERR3132127 Pre-XDR-TB lineage2.2.1.1 None
ERR4829969 MDR-TB lineage3 pk
ERR2510861 MDR-TB lineage3 pk
ERR2510347 MDR-TB lineage3 pk
SRR6856035 MDR-TB lineage4.4.1.1 None
ERR11466017 MDR-TB lineage2.2.1 None
ERR2510252 Pre-XDR-TB lineage2.2.1.1 pk
ERR2510871 Pre-XDR-TB lineage2.2.1.1 pk
ERR2510870 Pre-XDR-TB lineage2.2.1.1 pk
ERR3077933 MDR-TB lineage4.3.4.2.1 None
ERR2510659 MDR-TB lineage2.2.1 it
ERR2510483 MDR-TB lineage3 pk
SRR9971238 MDR-TB lineage4.3.2.1 None
SRR924221 Pre-XDR-TB lineage4.4.1.1 None
SRR9971251 MDR-TB lineage4.4.1.1 None
ERR11465825 MDR-TB lineage2.2.1 None
ERR4818045 HR-TB lineage1.1.2 gb
SRR9971286 MDR-TB lineage4.4.1.1 None
ERR11488607 MDR-TB lineage4.1.1.3 None
SRR9971319 MDR-TB lineage4.1.2 None
SRR9971316 Pre-XDR-TB lineage4.4.1.1 None
ERR11465061 HR-TB lineage2.2.1 None
ERR11466410 MDR-TB lineage2.2.1 None
SRR9613552 MDR-TB lineage2.2.2 None
SRR832977 MDR-TB lineage4.4.1.1 None
SRR832997 MDR-TB lineage4.4.1.1 None
SRR833018 MDR-TB lineage4.4.1.1 None
SRR7516344 Pre-XDR-TB lineage2.2.1 None
SRR833117 MDR-TB lineage4.4.1.1 None
SRR833014 MDR-TB lineage4.4.1.1 None
SRR9971366 Pre-XDR-TB lineage4.4.1.1 None
ERR11488439 MDR-TB lineage4.4.1.1 None
SRR833017 MDR-TB lineage4.4.1.1 None
SRR9738483 MDR-TB lineage4.1.2.1 None
SRR9971365 Pre-XDR-TB lineage4.4.1.1 None
SRR9971027 MDR-TB lineage4.4.1.1 None
SRR8365903 Pre-XDR-TB lineage2.2.1 None
ERR11488608 MDR-TB lineage4.1.1.3 None
SRR7592327 MDR-TB lineage4.8 None
SRR9970996 XDR-TB lineage4.4.1.1 None
SRR8365894 Pre-XDR-TB lineage2.2.1 None
SRR9971105 XDR-TB lineage4.4.1.1 None
SRR9971052 MDR-TB lineage4.4.1.1 None
ERR11488717 MDR-TB lineage4.4.1.1 None
ERR11466245 MDR-TB lineage2.2.1 None
SRR9971164 MDR-TB lineage4.4.1.1 None
SRR9971130 Pre-XDR-TB lineage4.4.1.1 None
SRR9971191 MDR-TB lineage4.4.1.1 None
SRR9971177 MDR-TB lineage4.4.1.1 None
SRR9971171 MDR-TB lineage4.4.1.1 None
ERR11488976 MDR-TB lineage4.4.1.1 None
SRR9971188 Pre-XDR-TB lineage4.4.1.1 None
SRR9971199 MDR-TB lineage4.4.1.1 None
DRR130058 Pre-XDR-TB lineage2.2.1 None
DRR130169 Pre-XDR-TB lineage2.2.1 None
DRR130057 Pre-XDR-TB lineage2.2.1 None
DRR130162 MDR-TB lineage2.2.1 None
DRR130168 Pre-XDR-TB lineage2.2.1 None
DRR130138 Pre-XDR-TB lineage4.5 None
DRR130171 Pre-XDR-TB lineage2.2.1 None
DRR130170 Pre-XDR-TB lineage2.2.1 None
DRR130197 Pre-XDR-TB lineage2.2.1 None
DRR130166 Pre-XDR-TB lineage2.2.1 None
DRR130167 Pre-XDR-TB lineage2.2.1 None
ERR12118022 MDR-TB lineage4.3.4.2 None
ERR11489053 MDR-TB lineage4.1.2.1 None
ERR11488757 MDR-TB lineage4.1.2.1 None
ERR11488824 Pre-XDR-TB lineage4.4.1.1 None
ERR11488402 MDR-TB lineage2.2.1 None
ERR10225494 Pre-XDR-TB lineage2.2.1.1 None
ERR10748180 MDR-TB lineage4.4.1.1 None
ERR10748185 MDR-TB lineage4.4.1.1 None
ERR10748259 MDR-TB lineage4.4.1.1 None
ERR10748224 MDR-TB lineage4.4.1.1 None
ERR10748251 MDR-TB lineage4.4.1.1 None
ERR10748268 MDR-TB lineage4.4.1.1 None
ERR10748445 MDR-TB lineage4.4.1.1 None
ERR10748274 MDR-TB lineage4.4.1.1 None
ERR10748318 MDR-TB lineage4.1.1.3 None
ERR10869132 Pre-XDR-TB lineage2.2.1 None
ERR10869118 Pre-XDR-TB lineage2.2.1 None
ERR10877876 MDR-TB lineage2.2.1 None
ERR10877861 MDR-TB lineage2.2.1 None
ERR10877886 MDR-TB lineage2.2.1 None
ERR10877890 Pre-XDR-TB lineage2.2.1 None
ERR11043091 MDR-TB lineage2.2.1 None
ERR11043158 HR-TB lineage4.4.1.1 None
ERR11043524 HR-TB lineage4.4.1.1 None
ERR11043214 HR-TB lineage4.4.1.1 None
ERR11043584 HR-TB lineage4.4.1.1 None
ERR11043660 HR-TB lineage4.4.1.1 None
ERR11043991 MDR-TB lineage2.2.1 None
ERR11043735 XDR-TB lineage2.2.1 None
ERR11044561 HR-TB lineage4.4.1.1 None
ERR11043990 MDR-TB lineage2.2.1 None
ERR11044179 HR-TB lineage4.4.1.1 None
ERR11044814 HR-TB lineage4.4.1.1 None
ERR11044603 HR-TB lineage4.8;lineage4.4.1.1 None
ERR11488438 HR-TB lineage4.4.1.1 None
ERR11465631 HR-TB lineage2.2.1 None
ERR3639811 MDR-TB lineage4.3.4.2 None
ERR3273148 MDR-TB lineage2.2.1 None
ERR11465851 MDR-TB lineage2.2.1 None
ERR3287583 Pre-XDR-TB lineage4.3.4.2 None
ERR4195285 MDR-TB lineage4.1.2.1 None
ERR405221 MDR-TB lineage2.2.1.1 None
ERR4423650 MDR-TB lineage2.2.1.1 None
ERR4276865 XDR-TB lineage2.2.1 None
ERR4276864 MDR-TB lineage3 None
ERR4423534 MDR-TB lineage2.2.1.1 None
ERR4423615 Pre-XDR-TB lineage4.6.2.2 None
ERR4423637 Pre-XDR-TB lineage4.6.2.2 None
ERR4423658 MDR-TB lineage2.2.1.1 None
ERR4423652 MDR-TB lineage2.2.1.1 None
ERR4423651 MDR-TB lineage2.2.1.1 None
ERR4423747 MDR-TB lineage2.2.1 None
ERR4423653 MDR-TB lineage2.2.1.1 None
ERR4423742 MDR-TB lineage2.2.1 None
ERR4423659 MDR-TB lineage2.2.1.1 None
ERR4423773 MDR-TB lineage2.2.1.1 None
ERR4423735 MDR-TB lineage2.2.1 None
ERR4423748 MDR-TB lineage2.2.1 None
ERR4553669 MDR-TB lineage4.3.4.2 None
ERR4423774 MDR-TB lineage2.2.1.1 None
ERR4553524 MDR-TB lineage4.8 None
ERR4553602 MDR-TB lineage4.8 None
ERR4553728 MDR-TB lineage4.3.4.2 None
ERR4553834 Pre-XDR-TB lineage4 None
ERR4553750 HR-TB None
ERR4553844 MDR-TB lineage4.3.4.2 None
ERR4553842 MDR-TB lineage4.8 None
ERR4831821 MDR-TB lineage2.2.1 vn
ERR11488919 MDR-TB lineage4.4.1.1 None
ERR4831789 MDR-TB lineage2.2.1 vn
ERR2515284 MDR-TB lineage4.1.2.1 za
ERR4831811 MDR-TB lineage2.2.1 vn
ERR11798640 HR-TB lineage4.3.3 None
ERR2515636 MDR-TB lineage4.4.1.1 za
ERR8975512 Pre-XDR-TB lineage4.4.1.1 None
ERR4809173 MDR-TB lineage4.4.1.1 za
ERR4809298 MDR-TB lineage4.4.1.1 za
ERR4800159 Pre-XDR-TB lineage3 None
ERR4800245 MDR-TB lineage2.2.1.1 None
ERR4828371 RR-TB lineage4.2.2 vn
ERR4831442 Pre-XDR-TB lineage3 None
ERR4829990 MDR-TB lineage4.1.2.1 None
ERR4831479 Pre-XDR-TB lineage2.2.1 None
ERR4800711 Pre-XDR-TB lineage2.2.1 None
ERR8975509 XDR-TB lineage4.4.1.1 None
ERR2515337 Pre-XDR-TB lineage4.1.1.3 za
ERR4799677 Pre-XDR-TB lineage4.2.2.2 None
ERR4831433 Pre-XDR-TB lineage3 None
ERR4831469 MDR-TB lineage3 None
ERR4809353 MDR-TB lineage4.1.2.1 za
ERR4800716 Pre-XDR-TB lineage2.2.1 None
ERR5917967 Pre-XDR-TB lineage4.4.1.1 za
ERR8975948 Pre-XDR-TB lineage4.4.1.1 None
ERR8975810 Pre-XDR-TB lineage4.4.1.1 None
ERR8975725 MDR-TB lineage4.1.1.3 None
ERR2515242 MDR-TB lineage4.4.1.1 za
ERR2515474 Pre-XDR-TB lineage4.1.1.3 za
ERR4830490 MDR-TB lineage4.4.1.1 za
ERR4830499 MDR-TB lineage4.4.1.1 za
ERR4830562 Pre-XDR-TB lineage4.4.1.1 None
ERR5864520 MDR-TB lineage4.2.1.1 None
ERR5864527 MDR-TB lineage4.2.1.1 None
ERR5864525 MDR-TB lineage4.2.1.1 None
ERR5864521 MDR-TB lineage4.2.1.1 None
ERR4830561 Pre-XDR-TB lineage4.4.1.1 None
SRR16087878 Pre-XDR-TB lineage4.2.1.1 None
ERR5864522 MDR-TB lineage4.2.1.1 None
ERR5864850 Pre-XDR-TB lineage2.2.1 None
ERR5864524 MDR-TB lineage4.2.1.1 None
ERR5864523 MDR-TB lineage4.2.1.1 None
ERR5864526 MDR-TB lineage4.2.1.1 None
ERR5864528 MDR-TB lineage4.2.1.1 None
ERR5864858 Pre-XDR-TB lineage2.2.1 None
ERR5864849 Pre-XDR-TB lineage2.2.1 None
ERR5864851 Pre-XDR-TB lineage2.2.1 None
ERR5864855 Pre-XDR-TB lineage2.2.1 None
ERR5864853 Pre-XDR-TB lineage2.2.1 None
ERR5864862 Pre-XDR-TB lineage2.2.1 None
ERR5864852 Pre-XDR-TB lineage2.2.1 None
ERR5864854 Pre-XDR-TB lineage2.2.1 None
ERR5864859 Pre-XDR-TB lineage2.2.1 None
ERR5864856 Pre-XDR-TB lineage2.2.1 None
ERR5864864 Pre-XDR-TB lineage2.2.1 None
ERR5864861 Pre-XDR-TB lineage2.2 None
ERR5864857 Pre-XDR-TB lineage2.2.1 None
ERR5864860 Pre-XDR-TB lineage2.2.1 None
ERR5864863 Pre-XDR-TB lineage2.2.1 None
ERR5864865 Pre-XDR-TB lineage2.2.1 None
ERR5865253 Pre-XDR-TB lineage2.2.1 None
ERR5865252 Pre-XDR-TB lineage2.2.1 None
ERR5865254 Pre-XDR-TB lineage2.2.1 None
ERR5865255 Pre-XDR-TB lineage2.2.1 None
ERR5865276 Pre-XDR-TB lineage2.2.1 None
ERR5865277 MDR-TB lineage2.2.1 None
ERR5866030 Pre-XDR-TB lineage2.2.1 None
ERR5865279 MDR-TB lineage2.2.1 None
ERR5865275 Pre-XDR-TB lineage2.2.1 None
ERR5865278 MDR-TB lineage2.2.1 None
ERR5865846 Pre-XDR-TB lineage4.2.1.1 None
ERR5866129 MDR-TB lineage2.2.1 None
ERR5866031 Pre-XDR-TB lineage2.2.1 None
ERR5866128 MDR-TB lineage2.2.1 None
ERR688015 Pre-XDR-TB lineage3 None
ERR5979425 RR-TB lineage3 None
ERR5866130 MDR-TB lineage2.2.1 None
ERR5897119 Pre-XDR-TB lineage3 None
ERR6879039 MDR-TB lineage4.3.4.1 None
ERR6879040 Pre-XDR-TB lineage4.3.4.2 None
SRR11662669 MDR-TB lineage2.1 None
ERR688028 Pre-XDR-TB lineage3 None
ERR11466374 MDR-TB lineage2.2.1 None
ERR7737640 MDR-TB lineage4.3.4.2.1 None
ERR7737716 MDR-TB lineage1.1.1 None
ERR7737649 MDR-TB lineage4.4.1.1 None
ERR7737666 MDR-TB lineage4.4.1.1 None
ERR7737688 MDR-TB lineage4.4.1.1 None
ERR7737738 MDR-TB lineage4.4.1.1 None
ERR7737788 MDR-TB lineage4.4.1.1 None
ERR7737747 MDR-TB lineage4.4.1.1 None
SRR24256340 MDR-TB lineage4.2.1.1 None
ERR7737802 MDR-TB lineage4.4.1.1 None
ERR7737920 MDR-TB lineage4.4.1.1 None
ERR7737843 MDR-TB lineage4.4.1.1 None
ERR7737904 MDR-TB lineage4.4.1.1 None
SRR24256365 MDR-TB lineage4.2.1.1 None
SRR24255946 MDR-TB lineage4.2.1.1 None
ERR7911396 Pre-XDR-TB lineage2.2.1 None
ERR8774433 MDR-TB lineage2.2.1 None
ERR7911397 Pre-XDR-TB lineage2.2.1 None
ERR8773965 MDR-TB lineage4.3.3 None
ERR8774232 Pre-XDR-TB lineage4.6.2.2 None
ERR8774445 MDR-TB lineage2.2.1 None
ERR7911395 Pre-XDR-TB lineage2.2.1 None
ERR8774265 Pre-XDR-TB lineage4.6.2.2 None
ERR8774440 MDR-TB lineage2.2.1 None
ERR8774447 MDR-TB lineage2.2.1 None
ERR9029377 MDR-TB lineage4.4.1.1 None
SRR11662456 MDR-TB lineage2.2.1 None
SRR16087967 Pre-XDR-TB lineage2.2.1 None
ERR9027258 MDR-TB lineage2.2.1 None
ERR9119508 MDR-TB lineage4.6.4 None
ERR9119583 MDR-TB lineage4.1.1 None
ERR9992632 Pre-XDR-TB lineage4.4.1.1 None
ERR9907700 MDR-TB lineage4.3.2 None
ERR9907722 MDR-TB lineage4.3.2 None
ERR9119632 MDR-TB lineage4.6.2.2 None
ERR9907669 MDR-TB lineage4.3.2 None
ERR9907690 MDR-TB lineage4.3.2 None
ERR9907761 MDR-TB lineage4.3.2 None
ERR9992627 Pre-XDR-TB lineage4.4.1.1 None
ERR9993107 Pre-XDR-TB lineage4.4.1.1 None
ERR9992643 Pre-XDR-TB lineage4.4.1.1 None
ERR9992789 Pre-XDR-TB lineage4.4.1.1 None
ERR9992837 Pre-XDR-TB lineage4.4.1.1 None
ERR9992989 Pre-XDR-TB lineage4.1.1.3 None
ERR9992640 Pre-XDR-TB lineage4.4.1.1 None
ERR9992864 MDR-TB lineage4.1.2.1 None
ERR9992983 Pre-XDR-TB lineage4.4.1.1 None
ERR9993071 Pre-XDR-TB lineage4.4.1.1 None
ERR9993151 Pre-XDR-TB lineage4.4.1.1 None
ERR9993129 Pre-XDR-TB lineage4.4.1.1 None
ERR9993232 Pre-XDR-TB lineage2.2.1 None
SRR1019160 Pre-XDR-TB lineage4.4.1.1 None
SRR1019153 MDR-TB lineage4.4.1.1 None
SRR10315463 MDR-TB lineage4.4.1.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR10315532 MDR-TB lineage4.4.1.1 None
SRR10315510 MDR-TB lineage4.4.1.1 None
SRR11349203 MDR-TB lineage4.4.1.1 None
SRR10808535 Pre-XDR-TB lineage2.2.1 None
SRR10315616 Pre-XDR-TB lineage4.4.1.1 None
SRR10808787 Pre-XDR-TB lineage2.2.1 None
SRR11349195 MDR-TB lineage4.4.1.1 None
SRR1140899 MDR-TB lineage4.4.1.1 None
SRR11349209 MDR-TB lineage4.1.2.1 None
SRR1140924 Pre-XDR-TB lineage4.4.1.1 None
SRR1144751 MDR-TB lineage4.3.3 None
SRR1159526 MDR-TB lineage2.2.1 None
SRR1146369 MDR-TB lineage4.3.3 None
SRR1159521 MDR-TB lineage2.2.1 None
SRR1159721 MDR-TB lineage2.2.1 None
SRR1159780 MDR-TB lineage2.2.1 None
SRR1163079 Pre-XDR-TB lineage2.2.1 None
SRR1163017 MDR-TB lineage4.3.3 None
SRR1162977 MDR-TB lineage2.2.1 None
SRR1163216 MDR-TB lineage4.3.3 None
SRR1165254 Pre-XDR-TB lineage4.4.1.1 None
SRR1163291 Pre-XDR-TB lineage2.2.1 None
SRR1163407 MDR-TB lineage2.2.1 None
SRR1165244 MDR-TB lineage4.4.1.1 None
SRR1165645 MDR-TB lineage4.4.1.1 None
SRR1165266 MDR-TB lineage4.4.1.1 None
SRR1165620 MDR-TB lineage4.4.1.1 None
SRR1167344 MDR-TB lineage4.4.1.1 None
SRR1165653 MDR-TB lineage4.4.1.1 None
SRR1167304 MDR-TB lineage4.4.1.1 None
SRR1167345 MDR-TB None
SRR1165668 MDR-TB lineage4.4.1.1 None
SRR1167316 Pre-XDR-TB lineage4.4.1.1 None
SRR1167324 MDR-TB lineage4.4.1.1 None
SRR1167342 MDR-TB lineage4.4.1.1 None
SRR1167376 MDR-TB lineage4.4.1.1 None
SRR1169148 MDR-TB lineage4.4.1.1 None
SRR1169108 Pre-XDR-TB lineage2.2.1 None
SRR1168993 MDR-TB lineage2.2.1 None
SRR1172090 MDR-TB lineage4.4.1.1 None
SRR1169217 MDR-TB lineage4.4.1.1 None
SRR1169310 MDR-TB lineage4.4.1.1 None
SRR1169150 MDR-TB lineage4.4.1.1 None
SRR1169220 MDR-TB lineage4.4.1.1 None
SRR1169314 MDR-TB lineage4.4.1.1 None
SRR1172353 MDR-TB lineage4.4.1.1 None
SRR1172412 MDR-TB lineage2.2.1 None
SRR1172352 Pre-XDR-TB lineage2.2.1 None
SRR1172728 MDR-TB None
SRR1172817 HR-TB None
SRR1172777 MDR-TB lineage4.4.1.1 None
SRR1172981 MDR-TB lineage4.4.1.1 None
SRR1173063 MDR-TB lineage4.4.1.1 None
SRR1173095 MDR-TB lineage4.4.1.1 None
SRR1173187 Pre-XDR-TB lineage4.4.1.1 None
SRR1173150 MDR-TB lineage4.4.1.1 None
SRR1173321 MDR-TB lineage4.4.1.1 None
SRR1173245 MDR-TB lineage4.6.1;lineage2.2.1.1 None
SRR1173339 MDR-TB lineage4.4.1.1 None
SRR1173317 MDR-TB lineage4.4.1.1 None
SRR1173415 MDR-TB lineage4.6.1;lineage2.2.1.1 None
SRR1173353 MDR-TB lineage4.4.1.1 None
SRR1173786 MDR-TB lineage4.4.1.1 None
SRR1173499 MDR-TB lineage4.4.1.1 None
SRR1173545 MDR-TB lineage4.4.1.1 None
SRR1173595 Pre-XDR-TB lineage4.4.1.1 None
SRR1173866 MDR-TB lineage4.6.1;lineage2.2.1.1 None
SRR1173782 MDR-TB lineage4.4.1.1 None
SRR1180711 MDR-TB lineage2.2.1 None
SRR1173873 MDR-TB lineage4.6.1;lineage2.2.1.1 None
SRR1175355 MDR-TB lineage4.4.1.1 None
SRR1175074 MDR-TB None
SRR1181101 MDR-TB lineage2.2.1 None
SRR1180924 Pre-XDR-TB lineage2.2.1 None
SRR1180770 MDR-TB lineage2.2.1 None
SRR1181032 Pre-XDR-TB lineage2.2.1 None
SRR1184317 MDR-TB lineage4.4.1.1 None
SRR1184040 MDR-TB lineage2.2.1 None
SRR1184309 MDR-TB lineage4.4.1.1 None
SRR1184385 MDR-TB lineage4.4.1.1 None
SRR1184372 MDR-TB None
SRR1184384 MDR-TB lineage4.4.1.1 None
SRR1196486 MDR-TB lineage4.4.1.1 None
SRR11972232 MDR-TB lineage2.2.1 None
SRR1196558 MDR-TB lineage4.4.1.1 None
SRR1196553 MDR-TB lineage4.4.1.1 None
SRR1196716 MDR-TB lineage4.4.1.1 None
SRR11972177 Pre-XDR-TB None
SRR1196494 MDR-TB None
SRR11972192 MDR-TB lineage2.2.1.1 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR11972409 MDR-TB lineage2.2.1.1 None
SRR11972398 MDR-TB lineage2.2.1.1 None
SRR12416825 Pre-XDR-TB lineage2.2.1 None
SRR11972450 MDR-TB lineage2.2.1 None
SRR12142319 MDR-TB lineage2.2.1 None
SRR14782095 MDR-TB lineage4.2.1.1 None
SRR12416833 MDR-TB lineage2.2.1 None
SRR14088385 Pre-XDR-TB lineage2.2.1 None
SRR15014750 Pre-XDR-TB lineage2.2.1.1 None
SRR14782743 Pre-XDR-TB lineage2.2.1 None
SRR15014672 MDR-TB lineage3 None
SRR16370512 MDR-TB lineage2.2.1 None
SRR15315754 MDR-TB lineage2.2.1 None
SRR15369001 MDR-TB lineage2.2.1 None
SRR16370303 MDR-TB lineage2.2.1.1 None
SRR18054777 Pre-XDR-TB lineage2.2.1 None
SRR18054800 MDR-TB lineage2.2.2 None
SRR18054811 MDR-TB lineage2.2.1 None
SRR24256078 MDR-TB lineage4.2.1.1 None
SRR18715118 Pre-XDR-TB lineage4.2.1.1 None
SRR18714960 Pre-XDR-TB lineage4.2.1.1 None
SRR18715041 Pre-XDR-TB lineage4.2.1.1 None
SRR18714971 Pre-XDR-TB lineage4.2.1.1 None
SRR18715071 Pre-XDR-TB lineage4.2.1.1 None
SRR18715357 MDR-TB lineage2.2.1 None
SRR18715333 MDR-TB lineage4.2.1.1;lineage2.2.1 None
SRR18911463 MDR-TB lineage2.2.1 None
SRR20969641 MDR-TB lineage2.2.1 None
SRR20969476 MDR-TB lineage2.2.1 None
SRR19276624 MDR-TB lineage4.7 None
SRR20969779 MDR-TB lineage2.2.1 None
SRR20969660 MDR-TB lineage2.2.1 None
SRR17657993 MDR-TB lineage4.1.2.1 None
SRR25827783 MDR-TB lineage1.2.2.2 None
SRR20970002 Pre-XDR-TB lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR24709999 MDR-TB lineage2.2.1 None
SRR25207056 Pre-XDR-TB lineage2.1 None
SRR22175261 Pre-XDR-TB lineage2.2.1.1 None
SRR21576714 Pre-XDR-TB lineage2.2.1 None
SRR25515871 MDR-TB lineage2.2.1 None
SRR21576644 MDR-TB lineage2.2.1 None
SRR21576732 MDR-TB lineage2.2.1 None
SRR21747033 MDR-TB lineage4.4.2 None
SRR21747062 Pre-XDR-TB lineage2.2.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR22424806 MDR-TB lineage3 None
SRR22424733 RR-TB lineage3.1.2 None
SRR22424757 Pre-XDR-TB lineage2.2.1.1 None
SRR22424791 Pre-XDR-TB lineage1.1.2 None
SRR22424792 Pre-XDR-TB lineage3.1.2 None
ERR11068474 Pre-XDR-TB lineage2.2.1 None
SRR22424907 HR-TB lineage3 None
SRR22424921 MDR-TB lineage3 None
ERR11067821 MDR-TB lineage3.1.1 None
ERR11080852 MDR-TB lineage2.2.1 None
ERR11068535 Pre-XDR-TB lineage4.2.1.1;lineage2.2 None
ERR11068850 Pre-XDR-TB lineage2.2.1 None
ERR11081004 HR-TB lineage4.4.1.1 None
ERR11080861 MDR-TB lineage2.2.1 None
ERR11080909 MDR-TB lineage2.2.1 None
ERR11080926 MDR-TB lineage4.3.4.2 None
ERR11081066 HR-TB lineage4.4.1.1 None
ERR11081016 MDR-TB lineage2.2.1 None
ERR11081286 MDR-TB lineage4.2.2.2 None
ERR11081210 HR-TB lineage4.4.1.1 None
ERR11081080 HR-TB lineage4.4.1.1 None
ERR11081098 HR-TB lineage4.4.1.1 None
ERR11082402 HR-TB lineage4.4.1.1 None
ERR11081401 HR-TB lineage4.4.1.1 None
ERR11081693 HR-TB lineage4.4.1.1 None
ERR11082059 HR-TB lineage4.4.1.1 None
ERR11082162 MDR-TB lineage2.2.1 None
ERR11082199 MDR-TB lineage2.2.1 None
ERR11081340 HR-TB lineage4.4.1.1 None
ERR11081545 HR-TB lineage4.4.1.1 None
ERR11081754 HR-TB lineage4.4.1.1 None
ERR11082256 MDR-TB lineage4.7 None
ERR11082345 MDR-TB lineage2.2.1 None
ERR11082377 Pre-XDR-TB lineage4.7 None
SRR21887747 Pre-XDR-TB lineage2.2.1 None
ERR11082786 MDR-TB lineage2.2.1 None
ERR9806649 MDR-TB lineage4.4.1.1 None
ERR10610092 MDR-TB lineage4.4.1.1 None
SRR21887681 Pre-XDR-TB lineage2.2.1 None
ERR9806836 MDR-TB lineage4.4.1.1 None
ERR10610045 MDR-TB lineage4.4.1.1 None
SRR21887699 Pre-XDR-TB lineage2.2.1 None
SRR25206967 Pre-XDR-TB lineage2.2.1 None
SRR24709991 Pre-XDR-TB lineage4.3.3 None
SRR26937074 MDR-TB lineage2.2.1 None
SRR25827356 Pre-XDR-TB lineage3;lineage2.2.1.2;lineage2.2.1.1 None
SRR25827394 XDR-TB lineage4.9;lineage3;lineage2.2.1 None
SRR25207345 Pre-XDR-TB lineage2.2.1 None
SRR25827423 Pre-XDR-TB lineage2.2.1.1 None
SRR25827784 MDR-TB lineage1.2.2.2 None
SRR25827459 Pre-XDR-TB lineage3;lineage1.2.2.2 None
SRR25827674 XDR-TB lineage3;lineage2.2.1.1 None
SRR28239450 MDR-TB lineage2.2.1 None
SRR25827807 Pre-XDR-TB lineage3.1.2 None
SRR26400062 MDR-TB lineage2.2.1 None
SRR25827812 Pre-XDR-TB lineage3;lineage2.2.1.1 None
SRR26399854 MDR-TB lineage2.1 None
SRR24255983 MDR-TB lineage4.2.1.1 None
SRR24256185 Pre-XDR-TB lineage4.2.1.1 None
SRR24256198 Pre-XDR-TB lineage4.2.1.1 None
SRR25206945 MDR-TB lineage2.2.1 None
SRR25827528 MDR-TB lineage2.2.1.1 None
SRR25827457 Pre-XDR-TB lineage3;lineage1.2.2.2 None
SRR25827645 Pre-XDR-TB lineage2.2.1.1 None
SAMN03246537 RR-TB lineage2.2.1 cn
SRR25827652 Pre-XDR-TB lineage4.1.1.1;lineage3;lineage2.2.1.1 None
ERR4813715 MDR-TB lineage4.3.4.1 None
ERR4813873 MDR-TB lineage4.3.4.1 None
SRR1723568 MDR-TB lineage2.2.1 cn
SRR5341416 MDR-TB lineage3 in
SRR671857 MDR-TB lineage2.2.2 cn
ERR245725 Sensitive lineage4.3.4.2.1 mw