lineage | Count |
---|---|
lineage2.2 | 3 |
79 | |
lineage4 | 11 |
lineage4.9 | 3 |
lineage4;lineage3.1 | 1 |
lineage1.1.2 | 1 |
lineage2.2.1 | 1 |
lineage4.5 | 1 |
lineage4.1 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.3 | 1 |
La1.8.1 | 1 |
lineage2.2.1.1 | 1 |
lineage1.1 | 1 |
spoligotype | Count |
---|---|
None | 106 |
ID | Drug resistance | Lineage | Country iso2 | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR5311090 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323043 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283027 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR3797043 | HR-TB | None | ERR3797061 | Other | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4810741 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6358991 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR736874 | HR-TB | None | ERR736835 | HR-TB | None | ERR702406 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | SRR10808805 | Sensitive | None | SRR1172817 | HR-TB | None | SRR1173629 | Other | None | SRR1172951 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1173778 | Other | None | SRR1196566 | HR-TB | None | SRR1184388 | Other | None | SRR15368973 | Other | None | SRR12142341 | HR-TB | None | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176751 | HR-TB | None | SRR19304036 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675311 | Other | None | SRR3675236 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675486 | HR-TB | None | SRR3675234 | Other | None | ERR176643 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675510 | Other | None | ERR212121 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212001 | HR-TB | None | SRR3742665 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR6045503 | HR-TB | None | ERR2693231 | Other | None | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | SRR6044780 | Other | lineage4.9 | None | SRR6045526 | HR-TB | None | SRR6045555 | HR-TB | None | ERR2693257 | Other | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323036 | HR-TB | None |
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