EBG00000313325 - n.263C>A
Drug resistance types
25 Sensitive
37 RR-TB
11 HR-TB
7 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 4 |
| lineage4.3.2.1 | 1 |
| lineage1.1.3 | 1 |
| lineage4.9 | 55 |
| lineage4.2.1 | 1 |
| lineage3.1.2 | 2 |
| lineage3.1 | 1 |
| lineage3.1.1 | 4 |
| lineage1.1.3.3 | 1 |
| lineage4.6 | 1 |
| La1.8.1 | 2 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1 | 10 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.8 | 2 |
| lineage1.2.1.2 | 5 |
| lineage3.1.2.1 | 4 |
| lineage2.2.2 | 2 |
| lineage2.2 | 2 |
| lineage1.1.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| 2 | |
| lineage4.1.2.1 | 4 |
| lineage4.6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 117 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046173 | Other | lineage3 | None | ERR4821208 | Other | lineage4.3.2.1 | None | ERR4821264 | Other | lineage1.1.3 | None | ERR4821551 | Sensitive | lineage4.9 | None | ERR4822224 | HR-TB | lineage4.2.1 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045743 | Other | lineage3 | None | SRR6045764 | Sensitive | lineage4.9 | None | SRR6045910 | Other | lineage3.1 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045312 | Other | lineage1.1.3.3 | None | ERR502942 | Sensitive | lineage4.9 | None | ERR4872193 | MDR-TB | lineage4.6 | None | ERR5162122 | HR-TB | lineage4.9 | None | ERR5087606 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | SRR7646056 | Other | lineage4.2.1.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7645856 | Sensitive | lineage4.4.1.1 | None | SRR7645853 | MDR-TB | lineage2.2.1 | None | ERR473279 | Other | lineage4.9 | None | SRR7755705 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | ERR4818465 | Other | lineage3 | gb | ERR10796627 | Other | lineage4 | None | ERR10796635 | Other | lineage4 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR3468601 | HR-TB | La1.8.1 | None | ERR473304 | Sensitive | lineage2.2.1 | None | ERR779662 | Sensitive | lineage3.1.1 | None | ERR6197022 | Other | lineage4.9 | None | ERR4797141 | Sensitive | lineage3 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR779661 | Sensitive | lineage4.3.4.2.1 | None | SRR10315473 | MDR-TB | lineage4.8.1 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR9117806 | Other | lineage4.8 | None | SRR12006663 | Sensitive | lineage1.2.1.2 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1173174 | Pre-XDR-TB | lineage2.2.2 | None | SRR1165236 | Pre-XDR-TB | lineage2.2 | None | SRR1167264 | Pre-XDR-TB | lineage2.2 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR13861154 | RR-TB | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR13861233 | RR-TB | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861275 | Sensitive | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861255 | RR-TB | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861355 | RR-TB | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861346 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861437 | RR-TB | lineage4.9 | None | SRR13861393 | Sensitive | lineage4.9 | None | SRR13861402 | Other | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861529 | Sensitive | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861565 | RR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861672 | Sensitive | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR14782555 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370608 | Sensitive | lineage1.2.1.2 | None | SRR16156291 | Other | lineage4.9 | None | SRR16157045 | Sensitive | lineage4.9 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | ERR4815265 | Other | lineage2.2.1 | None | SRR22048532 | Sensitive | lineage1.2.1.2 | None | ERR4815183 | Sensitive | lineage4.1.1.3.1 | None | SRR19317524 | Sensitive | lineage1.2.1.2 | None | SRR21674642 | Sensitive | lineage1.2.1.2 | None | SRR6280271 | Sensitive | lineage2.2.1 | cn | ERR161033 | HR-TB | None | ERR212042 | HR-TB | lineage3.1.1 | None | SRR3105762 | HR-TB | None | SRR3743190 | Sensitive | lineage4.1.2.1 | None | ERR4817368 | Other | lineage4.6.3 | None | SRR3742667 | Sensitive | lineage4.9 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | SRR5152904 | Other | lineage2.2.1 | None | SAMN02403473 | Pre-XDR-TB | lineage2.2.2 | None | ERR4817917 | Other | lineage2.2.1 | None | ERR4818188 | Other | lineage4.1.2.1 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | SRR6280286 | Sensitive | lineage2.2.1 | None | ERR4819246 | Other | lineage3.1.2 | None | ERR4819206 | Other | lineage4.8 | None | ERR4820408 | Other | lineage4.1.2.1 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341462 | Pre-XDR-TB | lineage3.1.2.1 | None |
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