Rv0005 - c.1023G>A
Drug resistance types
9 Sensitive
0 RR-TB
12 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 12 |
| La1;lineage2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.1.2.1 | 1 |
| La3;lineage4.9 | 4 |
| La1;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.8 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage2.2.1.1 | 1 |
| La1.6;lineage4 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 39 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1169249 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3283044 | Other | lineage4 | None | SRR29096107 | Sensitive | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR19115694 | Sensitive | lineage4.8 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR19304017 | Sensitive | lineage4.8 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
|---|
