Rv0643c - c.15A>G

Drug resistance types
241 Sensitive 6 RR-TB 4 HR-TB 21 MDR-TB 20 Pre-XDR-TB 4 XDR-TB 9 Other
lineage Counts
lineage Count
lineage4.1.1.2 241
lineage4.1.1 59
lineage4.1.1.2;lineage4.9 1
lineage2.2.1;lineage4.1.1.2 1
lineage4.1.1.2;lineage4.3.4.2.1 1
lineage3;lineage4.1.1.2 1
lineage4.1.1.2;lineage4.7 1
spoligotype Counts
spoligotype Count
None 305
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR13291486 Sensitive lineage4.1.1.2 None
ERR5908141 Sensitive lineage4.1.1.2 None
SRR6045860 Sensitive lineage4.1.1.2 None
ERR2660531 Sensitive lineage4.1.1.2 None
SRR6044916 Other lineage4.1.1 None
SRR6896150 RR-TB lineage4.1.1 None
SRR14519932 Sensitive lineage4.1.1 None
ERR13265185 Sensitive lineage4.1.1.2 None
SRR2101440 RR-TB lineage4.1.1 None
ERR5908165 Sensitive lineage4.1.1.2 None
SRR6982208 Sensitive lineage4.1.1 None
ERR11043365 Sensitive lineage4.1.1 None
ERR9806671 MDR-TB lineage4.1.1 None
SRR057660 Sensitive lineage4.1.1.2;lineage4.9 None
SRR22249448 Sensitive lineage4.1.1 None
ERR11774969 RR-TB lineage4.1.1 None
ERR7821229 Sensitive lineage4.1.1 None
SRR7069473 Other lineage4.1.1.2 None
ERR5908166 Sensitive lineage4.1.1.2 None
ERR13285963 Sensitive lineage4.1.1.2 None
SRR30034917 MDR-TB lineage4.1.1.2 None
SRR30034921 XDR-TB lineage4.1.1.2 None
ERR13288754 MDR-TB lineage4.1.1 None
SRR28351537 Pre-XDR-TB lineage4.1.1.2 None
SRR6896268 Sensitive lineage4.1.1 None
ERR11252562 Sensitive lineage4.1.1 None
ERR13291495 Sensitive lineage4.1.1.2 None
SRR6896151 Sensitive lineage4.1.1.2 None
SRR6981970 Sensitive lineage4.1.1.2 None
ERR13285958 Sensitive lineage4.1.1.2 None
SRR057510 Sensitive lineage4.1.1.2 None
SRR28868827 Sensitive lineage4.1.1 None
ERR13265286 Sensitive lineage4.1.1.2 None
ERR13266198 Sensitive lineage4.1.1.2 None
ERR2179711 Sensitive lineage4.1.1.2 cn
SRR1181014 Pre-XDR-TB lineage4.1.1.2 None
SRR16058535 Sensitive lineage4.1.1.2 None
ERR8975044 Other lineage4.1.1.2 None
ERR11811416 Sensitive lineage4.1.1.2 None
SRR16089890 Sensitive lineage4.1.1.2 None
ERR4817683 Sensitive lineage4.1.1 None
ERR13432005 Sensitive lineage4.1.1.2 None
ERR13431995 Sensitive lineage4.1.1.2 None
SRR2502782 Sensitive lineage4.1.1.2 None
SRR058375 Sensitive lineage4.1.1.2 None
ERR8975159 Sensitive lineage4.1.1 None
ERR13432024 Sensitive lineage4.1.1.2 None
ERR13432021 Sensitive lineage4.1.1.2 None
ERR13260817 Sensitive lineage2.2.1;lineage4.1.1.2 None
ERR1750909 Sensitive lineage4.1.1.2 None
ERR13285967 Sensitive lineage4.1.1.2 None
ERR11775061 Sensitive lineage4.1.1 None
SRR30034925 MDR-TB lineage4.1.1.2 None
ERR13432025 Sensitive lineage4.1.1.2 None
ERR10610333 MDR-TB lineage4.1.1 None
ERR13264944 Pre-XDR-TB lineage4.1.1.2 None
ERR13432044 Sensitive lineage4.1.1.2 None
ERR11775522 Sensitive lineage4.1.1 None
ERR13431994 Sensitive lineage4.1.1.2 None
SRR6896284 Sensitive lineage4.1.1 None
ERR13432032 Sensitive lineage4.1.1.2 None
ERR1035354 MDR-TB lineage4.1.1 br
SRR28860030 Sensitive lineage4.1.1 None
SRR21677883 Sensitive lineage4.1.1.2 None
SRR6045024 Other lineage4.1.1.2 None
SRR2101436 Sensitive lineage4.1.1 None
SRR29055829 Pre-XDR-TB lineage4.1.1.2 None
SRR30034910 MDR-TB lineage4.1.1.2 None
SRR30034912 Pre-XDR-TB lineage4.1.1.2 None
ERR7821196 Sensitive lineage4.1.1.2 None
SRR10869070 Sensitive lineage4.1.1.2 None
ERR7821159 Sensitive lineage4.1.1 None
SRR30034916 MDR-TB lineage4.1.1.2 None
ERR13260098 HR-TB lineage4.1.1 None
SRR29231253 Sensitive lineage4.1.1 None
ERR8975401 Sensitive lineage4.1.1.2 None
ERR13265513 Sensitive lineage4.1.1.2 None
ERR13285964 Sensitive lineage4.1.1.2 None
SRR30034924 Pre-XDR-TB lineage4.1.1.2 None
SRR1175346 Sensitive lineage4.1.1.2 None
ERR13432004 Sensitive lineage4.1.1.2 None
SRR6982088 Other lineage4.1.1.2 None
SRR29289182 Pre-XDR-TB lineage4.1.1.2 None
SRR29093223 Sensitive lineage4.1.1.2 None
SRR29289180 Pre-XDR-TB lineage4.1.1.2 None
ERR13285957 Sensitive lineage4.1.1.2 None
ERR4798867 RR-TB lineage4.1.1.2 in
ERR1034922 Sensitive lineage4.1.1.2 za
ERR6362716 Sensitive lineage4.1.1 None
ERR5908182 Sensitive lineage4.1.1.2 None
ERR4797197 Sensitive lineage4.1.1.2 in
SRR29096860 Sensitive lineage4.1.1 None
SRR6896479 Sensitive lineage4.1.1 None
ERR4797874 Sensitive lineage4.1.1 in
ERR13261587 HR-TB lineage4.1.1.2 None
SRR29681291 Sensitive lineage4.1.1.2 None
ERR9807038 Pre-XDR-TB lineage4.1.1.2 None
ERR4814493 Sensitive lineage4.1.1 gb
ERR13285966 Sensitive lineage4.1.1.2 None
ERR4815305 Sensitive lineage4.1.1.2 gb
ERR11252507 MDR-TB lineage4.1.1 None
SRR26399219 Sensitive lineage4.1.1.2 None
ERR13265551 Sensitive lineage4.1.1.2 None
ERR5908163 Sensitive lineage4.1.1.2 None
SRR6397709 Sensitive lineage4.1.1.2 ca
SRR057734 Sensitive lineage4.1.1.2 ca
SRR057610 Sensitive lineage4.1.1.2 ca
SRR057732 Sensitive lineage4.1.1.2 ca
SRR058372 Sensitive lineage4.1.1.2 ca
SRR058378 Sensitive lineage4.1.1.2 ca
SRR058371 Sensitive lineage4.1.1.2 ca
SRR058374 Sensitive lineage4.1.1.2 ca
SRR7439413 Sensitive lineage4.1.1.2 ca
SRR6397623 Sensitive lineage4.1.1.2 ca
SRR6398059 Sensitive lineage4.1.1.2 ca
SRR7439416 Sensitive lineage4.1.1.2 ca
SRR6397738 Sensitive lineage4.1.1.2 ca
SRR6397948 Sensitive lineage4.1.1.2 ca
SRR6397610 Sensitive lineage4.1.1.2 ca
SRR6397601 Sensitive lineage4.1.1.2 ca
ERR7911538 Pre-XDR-TB lineage4.1.1.2 za
SRR7439414 Sensitive lineage4.1.1.2 ca
SRR6397755 Sensitive lineage4.1.1.2 ca
ERR11465068 Sensitive lineage4.1.1.2;lineage4.3.4.2.1 None
SRR2101765 Sensitive lineage4.1.1.2 None
SRR2100030 Sensitive lineage4.1.1.2 None
ERR13260827 Sensitive lineage4.1.1.2 None
ERR13432001 Sensitive lineage4.1.1.2 None
ERR13432006 Sensitive lineage4.1.1.2 None
ERR13432022 Sensitive lineage4.1.1.2 None
ERR13265606 Sensitive lineage4.1.1.2 None
ERR2515981 Sensitive lineage4.1.1 None
ERR13265913 Sensitive lineage4.1.1.2 None
ERR13260805 Sensitive lineage4.1.1 None
ERR13432043 Sensitive lineage4.1.1.2 None
SRR058376 Sensitive lineage4.1.1.2 None
SRR058418 Sensitive lineage4.1.1.2 None
SRR1165224 Sensitive lineage4.1.1.2 None
SRR21732115 Sensitive lineage4.1.1.2 None
ERR4822120 Sensitive lineage4.1.1 None
ERR13288767 Sensitive lineage4.1.1 None
ERR9992761 XDR-TB lineage4.1.1.2 None
ERR9992698 Other lineage4.1.1.2 None
ERR13289377 XDR-TB lineage4.1.1.2 None
ERR9992987 Other lineage4.1.1.2 None
ERR2660534 Sensitive lineage4.1.1 None
ERR2515323 RR-TB lineage4.1.1.2 za
SRR22249938 Sensitive lineage4.1.1.2 None
SRR6981916 Sensitive lineage4.1.1 None
ERR8975703 RR-TB lineage4.1.1 None
ERR13265626 Sensitive lineage4.1.1.2 None
ERR13266359 Sensitive lineage4.1.1.2 None
ERR2660411 Sensitive lineage4.1.1 None
SRR22251742 Sensitive lineage4.1.1 None
ERR13431990 Sensitive lineage4.1.1.2 None
ERR7821160 Sensitive lineage4.1.1 None
SRR6982388 Sensitive lineage4.1.1 None
ERR9125772 Sensitive lineage4.1.1.2 None
SRR30034926 MDR-TB lineage4.1.1.2 None
SRR21685361 Sensitive lineage4.1.1.2 None
ERR4818876 Sensitive lineage4.1.1.2 None
SRR30034911 Pre-XDR-TB lineage4.1.1.2 None
ERR13260729 Sensitive lineage4.1.1 None
SRR30034919 XDR-TB lineage4.1.1.2 None
SRR28045583 Pre-XDR-TB lineage4.1.1 None
ERR13289594 Sensitive lineage4.1.1.2 None
ERR5908131 Sensitive lineage4.1.1.2 None
ERR5908168 Sensitive lineage4.1.1.2 None
SRR30034920 MDR-TB lineage4.1.1.2 None
ERR4819978 Sensitive lineage4.1.1 None
ERR1633867 Sensitive lineage4.1.1.2 za
ERR13432019 Sensitive lineage4.1.1.2 None
ERR2660546 Sensitive lineage4.1.1 None
SRR1188530 Sensitive lineage4.1.1.2 ca
ERR13285956 Sensitive lineage4.1.1.2 None
SRR1180346 Pre-XDR-TB lineage4.1.1.2 None
ERR13285955 Sensitive lineage4.1.1.2 None
ERR13285953 Sensitive lineage4.1.1.2 None
ERR5908199 Sensitive lineage4.1.1.2 None
SRR30034927 MDR-TB lineage4.1.1.2 None
ERR13285962 Sensitive lineage4.1.1.2 None
SRR30034929 MDR-TB lineage4.1.1.2 None
SRR30034928 MDR-TB lineage4.1.1.2 None
ERR13432031 Sensitive lineage4.1.1.2 None
ERR13290152 Sensitive lineage4.1.1 None
ERR4822176 Other lineage4.1.1.2 None
ERR4818252 Sensitive lineage4.1.1.2 None
SRR30034909 Pre-XDR-TB lineage4.1.1.2 None
ERR13432003 Sensitive lineage4.1.1.2 None
ERR9119058 Sensitive lineage4.1.1.2 None
ERR13260730 Sensitive lineage4.1.1 None
SRR058402 Sensitive lineage4.1.1.2 None
ERR13260449 Sensitive lineage4.1.1.2 None
SRR30034915 MDR-TB lineage4.1.1.2 None
ERR5908143 Sensitive lineage4.1.1.2 None
ERR5908164 Sensitive lineage4.1.1.2 None
SRR30034922 MDR-TB lineage4.1.1.2 None
SRR30034913 Pre-XDR-TB lineage4.1.1.2 None
ERR11811458 Sensitive lineage4.1.1.2 None
SRR29772733 MDR-TB lineage4.1.1 None
ERR11043556 Sensitive lineage4.1.1.2 None
ERR13285952 Sensitive lineage4.1.1.2 None
SRR6855687 Sensitive lineage4.1.1.2 None
ERR4829931 MDR-TB lineage3;lineage4.1.1.2 None
SRR2502783 Sensitive lineage4.1.1.2 None
ERR13432000 Sensitive lineage4.1.1.2 None
SRR058415 Sensitive lineage4.1.1.2 None
ERR13292021 Sensitive lineage4.1.1.2 None
SRR6982160 Sensitive lineage4.1.1.2 None
ERR5908169 Sensitive lineage4.1.1.2 None
ERR13432042 Sensitive lineage4.1.1.2 None
SRR1180362 Pre-XDR-TB lineage4.1.1.2 None
ERR13265258 Sensitive lineage4.1.1.2 None
SRR058420 Sensitive lineage4.1.1.2 None
SRR29094374 MDR-TB lineage4.1.1.2 None
ERR9119047 Sensitive lineage4.1.1.2 None
ERR9119072 Sensitive lineage4.1.1.2 None
SRR7070586 Sensitive lineage4.1.1.2 None
ERR13285965 Sensitive lineage4.1.1.2 None
SRR29231503 Sensitive lineage4.1.1.2 None
ERR13431996 Sensitive lineage4.1.1.2 None
ERR279560 Sensitive lineage4.1.1.2 None
ERR13432007 Sensitive lineage4.1.1.2 None
ERR1035048 HR-TB lineage4.1.1.2 za
SRR6855801 Sensitive lineage4.1.1.2 None
ERR1750910 Sensitive lineage4.1.1.2 za
SRR30034923 Pre-XDR-TB lineage4.1.1.2 None
SRR29093818 HR-TB lineage4.1.1.2 None
ERR4797574 Sensitive lineage4.1.1.2 in
ERR13285959 Sensitive lineage4.1.1.2 None
ERR4799015 Sensitive lineage4.1.1.2 in
SRR057731 Sensitive lineage4.1.1.2 None
ERR13285951 Sensitive lineage4.1.1.2 None
ERR13432023 Sensitive lineage4.1.1.2 None
ERR13285961 Sensitive lineage4.1.1.2 None
SRR30034914 MDR-TB lineage4.1.1.2 None
ERR13432020 Sensitive lineage4.1.1.2 None
ERR13260778 Sensitive lineage4.1.1.2 None
ERR13431992 Sensitive lineage4.1.1.2 None
SRR30034918 MDR-TB lineage4.1.1.2 None
ERR5908142 Sensitive lineage4.1.1.2 None
ERR4814743 Sensitive lineage4.1.1.2 None
SRR6398145 Sensitive lineage4.1.1.2 ca
SRR057770 Sensitive lineage4.1.1.2 None
SRR058369 Sensitive lineage4.1.1.2 ca
SRR058399 Sensitive lineage4.1.1.2 ca
SRR058373 Sensitive lineage4.1.1.2 ca
SRR058417 Sensitive lineage4.1.1.2 ca
SRR058117 Sensitive lineage4.1.1.2 ca
SRR058116 Sensitive lineage4.1.1.2 ca
SRR058081 Sensitive lineage4.1.1.2 ca
SRR057768 Sensitive lineage4.1.1.2 ca
SRR057771 Sensitive lineage4.1.1.2 ca
SRR057733 Sensitive lineage4.1.1.2 ca
SRR058370 Sensitive lineage4.1.1.2 ca
SRR057595 Sensitive lineage4.1.1.2 ca
SRR057619 Sensitive lineage4.1.1.2 ca
SRR6397944 Sensitive lineage4.1.1.2 ca
SRR6398006 Sensitive lineage4.1.1.2 ca
SRR6896448 Sensitive lineage4.1.1 None
SRR6397658 Sensitive lineage4.1.1.2 ca
SRR6152882 Sensitive lineage4.1.1 ca
SRR7439412 Sensitive lineage4.1.1.2 ca
SRR7439417 Sensitive lineage4.1.1.2 ca
SRR6397793 Sensitive lineage4.1.1.2 ca
SRR6397608 Sensitive lineage4.1.1.2 ca
SRR6397641 Sensitive lineage4.1.1.2 ca
SRR6397514 Sensitive lineage4.1.1.2 ca
SRR6397569 Sensitive lineage4.1.1.2 ca
SRR6397969 Sensitive lineage4.1.1.2 ca
SRR6397516 Sensitive lineage4.1.1.2 ca
SRR6397364 Sensitive lineage4.1.1.2 ca
SRR6397972 Sensitive lineage4.1.1.2 ca
SRR6397524 Sensitive lineage4.1.1.2 ca
SRR6982180 Sensitive lineage4.1.1.2 None
SRR6397612 Sensitive lineage4.1.1.2 ca
ERR11466419 Sensitive lineage4.1.1 None
ERR1023504 Sensitive lineage4.1.1.2 None
ERR2660482 Sensitive lineage4.1.1.2 None
SRR2101334 Sensitive lineage4.1.1 None
SRR2101364 Sensitive lineage4.1.1 None
SRR2101426 Sensitive lineage4.1.1 None
SRR2101498 Sensitive lineage4.1.1.2 None
SRR2101536 Sensitive lineage4.1.1.2 None
SRR2101571 Sensitive lineage4.1.1 None
ERR4814809 Sensitive lineage4.1.1.2 gb
ERR4817854 Sensitive lineage4.1.1.2 gb
ERR4818783 Sensitive lineage4.1.1.2 gb
ERR4972539 Pre-XDR-TB lineage4.1.1.2 None
SRR14520036 Sensitive lineage4.1.1.2 None
SRR3724999 Sensitive lineage4.1.1 None
SRR28859799 Other lineage4.1.1.2;lineage4.7 None
SRR7070311 Sensitive lineage4.1.1.2 None
SRR14519773 Sensitive lineage4.1.1 None
ERR552613 Sensitive lineage4.1.1.2 de
SRR3675499 Sensitive lineage4.1.1.2 gb
ERR2510378 Pre-XDR-TB lineage4.1.1.2 pk
ERR4814311 Sensitive lineage4.1.1.2 gb
ERR4814389 Sensitive lineage4.1.1.2 gb
ERR4816219 Sensitive lineage4.1.1.2 gb
ERR4818360 Sensitive lineage4.1.1.2 gb
ERR4818524 Sensitive lineage4.1.1.2 gb
ERR9119071 Sensitive lineage4.1.1.2 None
ERR11252415 Sensitive lineage4.1.1.2 None
ERR4972586 Pre-XDR-TB lineage4.1.1.2 None