Rv0667 - p.Asp435Gly
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
32 RR-TB
0 HR-TB
292 MDR-TB
538 Pre-XDR-TB
45 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 408 |
| lineage4.8 | 8 |
| lineage4.3.4.1 | 8 |
| lineage2.2.1 | 314 |
| lineage4.2.2 | 5 |
| lineage3 | 22 |
| lineage1.2.2.2 | 4 |
| lineage4.1.1.1 | 4 |
| lineage2.2.1.1 | 11 |
| lineage4.7 | 18 |
| lineage2.2.1;lineage4.3.3 | 3 |
| lineage1.2.1.2.1 | 4 |
| lineage2.2.2 | 19 |
| lineage4.4.2 | 5 |
| lineage4.1.4 | 1 |
| lineage3.1.1;lineage4.3.3 | 4 |
| lineage1.1.3.1 | 1 |
| lineage4.1 | 1 |
| lineage3.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.1.2.1 | 5 |
| lineage4.3.4.2 | 3 |
| lineage2;lineage4.3.3 | 1 |
| lineage4.1.1.3 | 4 |
| lineage5 | 2 |
| lineage1.1.2 | 6 |
| lineage2.2 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.5 | 5 |
| lineage4.2.2.1;lineage5 | 2 |
| lineage4.3.2.1 | 2 |
| lineage2.2.1;lineage4.4.2 | 1 |
| 1 | |
| lineage4.3.2 | 3 |
| lineage4.1.2 | 1 |
| lineage2.2.2;lineage4.3.3 | 1 |
| lineage3.1.1 | 1 |
| lineage2.2.1.1;lineage3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.3.3;lineage4.4.1.1 | 2 |
| lineage4.3.2.1;lineage4.3.3 | 1 |
| lineage3.1.2 | 1 |
| lineage1.2.2.2;lineage4.8 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.9 | 3 |
| lineage4.4.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1;lineage4.2.2 | 1 |
| lineage3;lineage4.4.1.2 | 1 |
| lineage4.3.2;lineage4.3.3 | 1 |
| lineage1.2.2.2;lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 907 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10315686 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925668 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173142 | Pre-XDR-TB | lineage4.3.3 | None | SRR29274210 | Pre-XDR-TB | lineage4.8 | None | SRR1184331 | Pre-XDR-TB | lineage4.3.3 | None | SRR13583339 | MDR-TB | lineage4.3.4.1 | None | SRR1180301 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349177 | Pre-XDR-TB | lineage4.3.3 | None | SRR9970990 | Pre-XDR-TB | lineage4.3.3 | None | SRR12420335 | MDR-TB | lineage2.2.1 | None | ERR13261254 | Pre-XDR-TB | lineage4.8 | None | SRR29681330 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970995 | XDR-TB | lineage4.3.3 | None | SRR28119790 | Pre-XDR-TB | lineage2.2.1 | None | SRR847777 | Pre-XDR-TB | lineage4.3.3 | za | SRR28119791 | Pre-XDR-TB | lineage2.2.1 | None | SRR29050973 | RR-TB | lineage4.2.2 | None | SRR22873610 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206936 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172188 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081156 | MDR-TB | lineage4.3.3 | None | ERR5865747 | MDR-TB | lineage2.2.1 | None | ERR2510292 | Pre-XDR-TB | lineage3 | pk | SRR25389528 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553555 | RR-TB | lineage1.2.2.2 | None | ERR5987376 | MDR-TB | lineage2.2.1 | None | SRR21887690 | XDR-TB | lineage2.2.1 | None | ERR7361964 | Pre-XDR-TB | lineage4.3.3 | None | SRR7516344 | Pre-XDR-TB | lineage2.2.1 | None | SRR29385409 | MDR-TB | lineage2.2.1 | None | SRR9971227 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748171 | MDR-TB | lineage4.1.1.1 | None | SAMEA5569971 | MDR-TB | lineage4.3.4.1 | None | ERR4798741 | MDR-TB | lineage4.1.1.1 | in | ERR5865165 | MDR-TB | lineage2.2.1 | None | ERR4799753 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR12420301 | MDR-TB | lineage2.2.1 | None | ERR11488842 | Pre-XDR-TB | lineage4.3.3 | None | SRR833013 | Pre-XDR-TB | lineage4.3.3 | None | SRR833058 | Pre-XDR-TB | lineage4.3.3 | za | SRR1196575 | Pre-XDR-TB | lineage4.3.3 | None | ERR4798235 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798282 | MDR-TB | lineage3 | in | ERR4872039 | XDR-TB | lineage4.7 | None | ERR8025683 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806902 | Pre-XDR-TB | lineage4.3.3 | None | ERR4796541 | MDR-TB | lineage2.2.1.1 | in | ERR13267054 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1180211 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831538 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR1196503 | Pre-XDR-TB | lineage4.3.3 | None | ERR4872043 | Pre-XDR-TB | lineage4.7 | None | SRR29016822 | MDR-TB | lineage1.2.2.2 | None | SAMN02403621 | Pre-XDR-TB | lineage4.3.3 | za | ERR5864850 | Pre-XDR-TB | lineage2.2.1 | None | ERR6336692 | MDR-TB | lineage1.2.1.2.1 | None | SRR1166228 | MDR-TB | lineage4.8 | ro | SAMN02585981 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925639 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361975 | Pre-XDR-TB | lineage4.3.3 | None | SRR23691420 | MDR-TB | lineage2.2.2 | None | SRR671748 | MDR-TB | lineage2.2.1 | cn | SRR671760 | Pre-XDR-TB | lineage4.4.2 | cn | SRR671785 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02586073 | Pre-XDR-TB | lineage4.3.3 | za | ERR13191623 | MDR-TB | lineage2.2.2 | None | SRR1173276 | XDR-TB | lineage4.3.3 | None | SRR1173498 | MDR-TB | lineage2.2.1 | None | SAMN03246215 | MDR-TB | lineage2.2.1 | cn | SRR671794 | Pre-XDR-TB | lineage2.2.1 | cn | ERR11488368 | Pre-XDR-TB | lineage4.3.3 | None | SRR8651577 | Pre-XDR-TB | lineage2.2.1 | cn | SRR833029 | Pre-XDR-TB | lineage4.3.3 | None | ERR4809057 | RR-TB | lineage4.3.3 | za | ERR4810956 | MDR-TB | lineage2.2.1 | cn | SRR25389486 | Pre-XDR-TB | lineage2.2.1 | None | SRR1019172 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773725 | Pre-XDR-TB | lineage4.3.3 | None | SRR25206961 | Pre-XDR-TB | lineage2.2.1 | None | ERR4808975 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180330 | Pre-XDR-TB | lineage4.3.3 | None | SRR27069466 | Pre-XDR-TB | lineage2.2.1 | None | SRR833078 | Pre-XDR-TB | lineage4.3.3 | za | SRR924208 | Pre-XDR-TB | lineage4.3.3 | None | ERR4810934 | MDR-TB | lineage2.2.1 | cn | ERR4810938 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810985 | MDR-TB | lineage2.2.1 | cn | ERR11773705 | Pre-XDR-TB | lineage4.3.3 | None | ERR7910853 | MDR-TB | lineage4.3.4.1 | pe | ERR4811288 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4812740 | MDR-TB | lineage4.1.4 | pe | ERR4830524 | Pre-XDR-TB | lineage4.3.3 | za | ERR2706996 | RR-TB | lineage3 | cd | SRR1169277 | MDR-TB | lineage4.3.3 | None | ERR7911193 | MDR-TB | lineage2.2.1 | za | ERR8975018 | XDR-TB | lineage4.3.3 | None | ERR4872045 | XDR-TB | lineage4.7 | None | ERR8975726 | RR-TB | lineage2.2.1.1 | None | ERR9992999 | XDR-TB | lineage4.3.3 | None | SAMN01925638 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925654 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167183 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | SRR6650126 | MDR-TB | lineage1.1.3.1 | None | SRR833086 | Pre-XDR-TB | lineage4.3.3 | za | SRR9970989 | Pre-XDR-TB | lineage4.3.3 | None | ERR11044545 | MDR-TB | lineage2.2.1 | None | ERR11080895 | MDR-TB | lineage2.2.1 | None | ERR11082256 | MDR-TB | lineage4.7 | None | SRR28888062 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773709 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975819 | Pre-XDR-TB | lineage4.3.3 | None | SRR924206 | Pre-XDR-TB | lineage4.3.3 | None | ERR133873 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2516764 | Pre-XDR-TB | lineage3 | gb | ERR2516794 | MDR-TB | lineage3 | gb | ERR2516555 | MDR-TB | lineage4.1 | nl | ERR2515776 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515175 | Pre-XDR-TB | lineage4.3.3 | za | SRR6824292 | MDR-TB | lineage2.2.1 | cn | SRR6824630 | MDR-TB | lineage2.2.1 | cn | SRR6824677 | MDR-TB | lineage2.2.1 | cn | SRR1169155 | Pre-XDR-TB | lineage4.3.3 | None | SRR6824662 | RR-TB | lineage2.2.1 | cn | ERR9992791 | XDR-TB | lineage4.3.3 | None | ERR9993074 | Pre-XDR-TB | lineage4.3.3 | None | SRR6824307 | RR-TB | lineage2.2.1 | cn | SRR11349166 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173199 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180379 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806993 | Pre-XDR-TB | lineage4.3.3 | None | SRR14088361 | MDR-TB | lineage3.1 | None | SRR20969768 | MDR-TB | lineage2.2.1 | None | SRR22175178 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206925 | Pre-XDR-TB | lineage2.2.1 | None | SRR25389514 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864863 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866386 | MDR-TB | lineage2.2.1 | None | SRR9971166 | XDR-TB | lineage4.3.3 | None | SRR9971375 | Pre-XDR-TB | lineage4.3.3 | None | ERR10762254 | MDR-TB | lineage4.3.3 | None | SAMN01925661 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925634 | Pre-XDR-TB | lineage4.3.3 | za | ERR5865255 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866385 | MDR-TB | lineage2.2.1 | None | SRR6257097 | Pre-XDR-TB | lineage2.2.1 | ru | SRR1723546 | MDR-TB | lineage2.2.1 | None | SRR833105 | Pre-XDR-TB | lineage4.3.3 | za | SRR12062505 | XDR-TB | lineage2.2.1 | None | SRR833077 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350412 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350421 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350416 | Pre-XDR-TB | lineage4.3.3 | za | SRR847796 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350429 | Pre-XDR-TB | lineage4.3.3 | za | SRR847776 | Pre-XDR-TB | lineage4.3.3 | za | SRR847789 | Pre-XDR-TB | lineage4.3.3 | za | SRR847783 | Pre-XDR-TB | lineage4.3.3 | za | SRR847779 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925663 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350433 | Pre-XDR-TB | lineage4.3.3 | za | SRR847785 | Pre-XDR-TB | lineage4.3.3 | za | SRR847791 | Pre-XDR-TB | lineage4.3.3 | za | SRR671721 | MDR-TB | lineage2.2.1 | cn | ERR4423692 | MDR-TB | lineage4.6.2.2 | None | ERR11773756 | MDR-TB | lineage2.2.1 | None | SAMN02586104 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586065 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586066 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586069 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586070 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586068 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586087 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586080 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586079 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586081 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586084 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586090 | Pre-XDR-TB | lineage4.3.3 | za | ERR133933 | MDR-TB | lineage2.2.1 | ru | ERR4872049 | Pre-XDR-TB | lineage4.7 | None | SRR29273642 | RR-TB | lineage4.1.2.1 | None | ERR11488681 | MDR-TB | lineage4.3.4.2 | None | ERR5865163 | MDR-TB | lineage2.2.1 | None | ERR7361989 | Pre-XDR-TB | lineage4.3.3 | None | SRR20969572 | XDR-TB | lineage2.2.1 | None | ERR1873435 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172254 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172869 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165674 | Pre-XDR-TB | lineage2;lineage4.3.3 | None | SRR1169271 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971228 | Pre-XDR-TB | lineage4.3.3 | None | SRR28467067 | MDR-TB | lineage2.2.2 | None | ERR13273202 | MDR-TB | lineage2.2.1 | None | SRR924230 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172289 | Pre-XDR-TB | lineage2.2.1 | None | ERR16022256 | MDR-TB | lineage3 | None | SRR1173391 | Pre-XDR-TB | lineage4.3.3 | None | ERR8773737 | RR-TB | lineage4.3.3 | None | ERR13290734 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183028 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196576 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | ERR11082585 | MDR-TB | lineage4.8 | None | ERR13430445 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510436 | MDR-TB | lineage3 | pk | ERR1035021 | RR-TB | lineage4.1.1.1 | za | SRR29289307 | MDR-TB | lineage3 | None | ERR3335729 | MDR-TB | lineage3 | pk | SRR29289371 | MDR-TB | lineage3 | None | SRR1184333 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806959 | Pre-XDR-TB | lineage4.3.3 | None | SRR14088380 | MDR-TB | lineage3 | None | SRR24114343 | MDR-TB | lineage3 | None | SRR29289131 | RR-TB | lineage3 | None | SRR29289265 | XDR-TB | lineage4.1.1.3 | None | ERR5865279 | MDR-TB | lineage2.2.1 | None | ERR5865162 | MDR-TB | lineage2.2.1 | None | ERR4831575 | Pre-XDR-TB | lineage4.3.3 | None | ERR4872200 | MDR-TB | lineage5 | None | ERR5865277 | MDR-TB | lineage2.2.1 | None | SRR29096324 | Pre-XDR-TB | lineage4.3.3 | None | ERR5865746 | MDR-TB | lineage2.2.1 | None | SRR18054780 | MDR-TB | lineage2.2.1 | None | SRR13423565 | Pre-XDR-TB | lineage2.2.1 | None | SRR25389524 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315702 | MDR-TB | lineage2.2.1 | None | ERR7361984 | Pre-XDR-TB | lineage4.3.3 | None | ERR5864852 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040307 | MDR-TB | lineage2.2.2 | None | SRR9971123 | Pre-XDR-TB | lineage4.3.3 | None | SRR10430373 | MDR-TB | lineage2.2.1 | None | ERR4797758 | Pre-XDR-TB | lineage1.1.2 | in | SRR924227 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011470 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488367 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350415 | Pre-XDR-TB | lineage4.3.3 | za | ERR9119965 | MDR-TB | lineage2.2.1 | None | ERR4872042 | XDR-TB | lineage4.7 | None | SRR18003017 | MDR-TB | lineage4.2.2 | None | SRR29385511 | XDR-TB | lineage2.2.1 | None | SAMN02350425 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350430 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02360625 | MDR-TB | lineage2.2.1 | kr | SAMN02350426 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350431 | Pre-XDR-TB | lineage4.3.3 | za | ERR4553635 | MDR-TB | lineage2.2 | None | SAMN02350422 | Pre-XDR-TB | lineage4.3.3 | za | SRR924228 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02403568 | Pre-XDR-TB | lineage4.3.3 | za | ERR473327 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173354 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02403569 | Pre-XDR-TB | lineage4.3.3 | za | SRR3743200 | Pre-XDR-TB | lineage4.4.1.1 | None | SAMN02628481 | Pre-XDR-TB | lineage2.2.1 | ir | SAMN02586076 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02628493 | Pre-XDR-TB | lineage2.2.1 | ir | SRR924234 | Pre-XDR-TB | lineage4.3.3 | None | SRR8758885 | Pre-XDR-TB | lineage4.3.3 | None | SRR6797778 | MDR-TB | lineage1.2.2.2 | None | ERR4810968 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1173200 | Pre-XDR-TB | lineage4.3.3 | None | ERR5865278 | MDR-TB | lineage2.2.1 | None | ERR7361959 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773739 | Pre-XDR-TB | lineage4.3.3 | None | ERR4809308 | RR-TB | lineage2.2.1 | za | SRR28393275 | MDR-TB | lineage4.3.4.1 | None | SRR28888086 | Pre-XDR-TB | lineage2.2.1 | None | SRR3055713 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773758 | Pre-XDR-TB | lineage2.2.1 | None | SRR28923833 | MDR-TB | lineage2.2.2 | None | SRR25515697 | MDR-TB | lineage2.2.1 | None | SRR1165723 | Pre-XDR-TB | lineage4.3.3 | None | ERR4808877 | Pre-XDR-TB | lineage4.3.3 | za | SRR1175325 | Pre-XDR-TB | lineage4.3.3 | None | ERR4810933 | MDR-TB | lineage2.2.1 | cn | ERR4810962 | MDR-TB | lineage2.2.1 | cn | ERR4810995 | MDR-TB | lineage2.2.1 | cn | ERR11773727 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173130 | MDR-TB | lineage2.2.1 | None | SRR1003107 | MDR-TB | lineage2.2.1 | None | SRR10040385 | MDR-TB | lineage2.2.1 | None | ERR7911101 | MDR-TB | lineage2.2.1 | vn | ERR4809290 | Pre-XDR-TB | lineage4.3.3 | za | ERR4809307 | MDR-TB | lineage4.4.1.1 | za | ERR7911119 | MDR-TB | lineage2.2.1.1 | vn | ERR4810471 | Pre-XDR-TB | lineage4.5 | cn | ERR4810485 | MDR-TB | lineage2.2.1 | cn | ERR4828371 | RR-TB | lineage4.2.2 | vn | SRR833033 | Pre-XDR-TB | lineage4.3.3 | None | SRR2024903 | MDR-TB | lineage4.4.2 | cn | ERR7911566 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911288 | MDR-TB | lineage2.2.1 | vn | SRR9971230 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971248 | MDR-TB | lineage2.2.1 | None | ERR4811327 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811332 | RR-TB | lineage4.5 | cn | ERR4811337 | MDR-TB | lineage2.2.1 | cn | SAMN01925670 | Pre-XDR-TB | lineage4.3.3 | None | SRR1013664 | XDR-TB | lineage2.2.2 | None | SRR1062842 | Pre-XDR-TB | lineage4.3.3 | None | SRR924692 | Pre-XDR-TB | lineage4.3.3 | None | ERR11043505 | MDR-TB | lineage4.2.2.1;lineage5 | None | ERR11044245 | MDR-TB | lineage2.2.1 | None | SRR25515754 | MDR-TB | lineage2.2.1 | None | ERR8975698 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011471 | Pre-XDR-TB | lineage4.3.3 | None | SRR10303322 | MDR-TB | lineage2.2.1 | None | SRR10430366 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049077 | XDR-TB | lineage2.2.2 | None | SRR11349167 | Pre-XDR-TB | lineage4.3.3 | None | SRR1183029 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184366 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992614 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992908 | XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR10040152 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040484 | MDR-TB | lineage2.2.1 | None | SRR10040485 | MDR-TB | lineage2.2.1 | None | SRR10315484 | MDR-TB | lineage2.2.1 | None | SRR1062844 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184301 | Pre-XDR-TB | lineage4.3.3 | None | ERR1193881 | Pre-XDR-TB | lineage4.3.3 | za | ERR229964 | MDR-TB | lineage2.2.1 | ru | SRR6824343 | MDR-TB | lineage2.2.1 | cn | SRR6824341 | MDR-TB | lineage2.2.1 | cn | SRR6824520 | MDR-TB | lineage2.2.1 | cn | SRR6824543 | MDR-TB | lineage2.2.1 | cn | SRR1184300 | XDR-TB | lineage4.3.3 | None | SRR924225 | Pre-XDR-TB | lineage4.3.3 | None | SRR924232 | Pre-XDR-TB | lineage4.3.3 | None | SRR9970994 | Pre-XDR-TB | lineage4.3.3 | None | SRR25207369 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062826 | Pre-XDR-TB | lineage4.3.3 | None | ERR040136 | MDR-TB | lineage3 | ug | ERR9806708 | MDR-TB | lineage4.3.2.1 | None | SRR15368764 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02053760 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053766 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01828243 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053773 | Pre-XDR-TB | lineage4.3.3 | za | SRR9971332 | Pre-XDR-TB | lineage4.3.3 | None | SRR25389525 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040264 | Pre-XDR-TB | lineage2.2.1 | None | SRR1011474 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173795 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181290 | Pre-XDR-TB | lineage4.3.3 | None | ERR551452 | Pre-XDR-TB | lineage4.3.3 | None | SRR28393257 | MDR-TB | lineage4.3.4.1 | None | SRR833121 | Pre-XDR-TB | lineage4.3.3 | None | SRR924219 | Pre-XDR-TB | lineage4.3.3 | None | SRR924207 | Pre-XDR-TB | lineage4.3.3 | None | ERR4423693 | MDR-TB | lineage4.6.2.2 | None | SRR28888069 | Pre-XDR-TB | lineage2.2.1 | None | DRR130161 | MDR-TB | lineage4.5 | None | SRR1167185 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315627 | Pre-XDR-TB | lineage4.3.3 | None | SRR18054775 | MDR-TB | lineage2.2.1 | None | SRR1167341 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169248 | MDR-TB | lineage4.3.3 | None | SRR18914175 | MDR-TB | lineage2.2.1;lineage4.4.2 | None | ERR4553430 | RR-TB | None | ERR11488425 | MDR-TB | lineage3 | None | SRR1196511 | Pre-XDR-TB | lineage4.3.3 | None | SRR833130 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911397 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420432 | MDR-TB | lineage2.2.1 | None | ERR4872040 | Pre-XDR-TB | lineage4.7 | None | SRR20969462 | MDR-TB | lineage2.2.1 | None | ERR9907703 | Pre-XDR-TB | lineage4.3.2 | None | SRR3082095 | MDR-TB | lineage2.2.1 | None | SRR847794 | Pre-XDR-TB | lineage4.3.3 | za | SRR1184382 | Pre-XDR-TB | lineage4.3.3 | None | SRR10305838 | RR-TB | lineage2.2.1 | None | SRR1062827 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169191 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02053744 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925653 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315684 | Pre-XDR-TB | lineage4.3.3 | None | ERR13289283 | RR-TB | lineage2.2.1.1 | None | ERR13284145 | MDR-TB | lineage2.2.1 | None | ERR13289323 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488704 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488942 | Pre-XDR-TB | lineage4.3.3 | None | SRR3105735 | Pre-XDR-TB | lineage4.1.2 | None | SRR10315655 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180233 | Pre-XDR-TB | lineage4.3.3 | None | SRR29538881 | MDR-TB | lineage4.3.3 | None | ERR13286201 | Pre-XDR-TB | lineage2.2.2;lineage4.3.3 | None | SRR26936944 | MDR-TB | lineage2.2.1 | None | SRR21887694 | MDR-TB | lineage2.2.1 | None | ERR13286055 | MDR-TB | lineage2.2.1 | None | ERR13286160 | MDR-TB | lineage3.1.1 | None | ERR4797227 | Pre-XDR-TB | lineage2.2.1 | in | ERR13289293 | RR-TB | lineage2.2.1.1 | None | ERR5864862 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866387 | MDR-TB | lineage2.2.1 | None | ERR4797311 | XDR-TB | lineage2.2.1.1;lineage3 | in | SRR1723535 | MDR-TB | lineage2.2.1 | None | SRR1165225 | Pre-XDR-TB | lineage4.3.3 | None | SRR28888079 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970056 | MDR-TB | lineage2.2.1.2 | None | ERR13289260 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361988 | Pre-XDR-TB | lineage4.3.3 | None | ERR13286214 | Pre-XDR-TB | lineage4.3.3 | None | ERR13286202 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173375 | MDR-TB | lineage2.2.1 | None | ERR13286043 | Pre-XDR-TB | lineage4.3.3 | None | ERR13289393 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181220 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992915 | XDR-TB | lineage4.3.3 | None | ERR9992629 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196477 | Pre-XDR-TB | lineage4.3.3 | None | ERR4872048 | XDR-TB | lineage4.7 | None | SRR12420401 | RR-TB | lineage2.2.1 | None | SRR25206949 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165698 | Pre-XDR-TB | lineage4.3.3 | None | SRR27069370 | MDR-TB | lineage2.2.1 | None | ERR2515754 | Pre-XDR-TB | lineage4.3.3 | za | SRR22048300 | RR-TB | lineage4.1.2.1 | None | SRR16087967 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088213 | MDR-TB | lineage2.2.1 | None | ERR5987220 | MDR-TB | lineage2.2.1 | None | SRR25207387 | MDR-TB | lineage2.2.1 | None | ERR1034662 | Pre-XDR-TB | lineage4.1.2.1 | bg | ERR4811280 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911395 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181376 | Pre-XDR-TB | lineage4.3.3 | None | ERR4827972 | MDR-TB | lineage2.2.1 | None | ERR8975515 | Pre-XDR-TB | lineage4.3.3 | None | ERR7362014 | Pre-XDR-TB | lineage4.3.3 | None | ERR4811295 | Pre-XDR-TB | lineage2.2.1 | cn | SRR12062506 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811310 | Pre-XDR-TB | lineage2.2.1 | cn | SRR25207380 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510503 | MDR-TB | lineage3 | pk | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062822 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971356 | MDR-TB | lineage2.2.1 | None | SRR18002993 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167350 | Pre-XDR-TB | lineage4.3.3 | None | ERR4808988 | Pre-XDR-TB | lineage4.3.3 | za | SRR833115 | Pre-XDR-TB | lineage4.3.3 | za | ERR5918119 | Pre-XDR-TB | lineage4.3.3 | za | SRR847788 | Pre-XDR-TB | lineage4.3.3 | za | ERR8975004 | Pre-XDR-TB | lineage4.3.3 | None | SRR924223 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975080 | Pre-XDR-TB | lineage4.3.3 | None | ERR10969128 | RR-TB | lineage4.3.4.2 | None | ERR4553424 | RR-TB | lineage2.2.1 | None | SRR833059 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925614 | Pre-XDR-TB | lineage4.3.3 | None | SRR26936993 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR26112717 | MDR-TB | lineage2.2.1 | None | ERR3256119 | MDR-TB | lineage1.2.1.2.1 | ph | SRR25206952 | Pre-XDR-TB | lineage2.2.1 | None | SAMN01925617 | Pre-XDR-TB | lineage4.3.3 | None | SRR847793 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925636 | Pre-XDR-TB | lineage4.3.3 | None | SRR924215 | Pre-XDR-TB | lineage4.3.3 | None | SRR27069441 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303349 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864856 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045728 | MDR-TB | lineage3 | None | ERR10748177 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911396 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173039 | Pre-XDR-TB | lineage4.3.3 | None | SRR12420419 | MDR-TB | lineage2.2.1 | None | SRR25207104 | MDR-TB | lineage2.2.1 | None | SRR1011462 | Pre-XDR-TB | lineage4.3.3 | None | SRR847778 | Pre-XDR-TB | lineage4.3.3 | za | SRR1049076 | XDR-TB | lineage2.2.2 | None | ERR13260542 | MDR-TB | lineage4.3.2 | None | ERR9806900 | Pre-XDR-TB | lineage4.3.3 | None | SRR924693 | Pre-XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | SRR9971256 | MDR-TB | lineage2.2.1 | None | SRR26937102 | MDR-TB | lineage2.2.1 | None | SRR1173561 | Pre-XDR-TB | lineage4.3.3 | None | SRR1723534 | MDR-TB | lineage2.2.1 | None | ERR2510630 | RR-TB | lineage3 | pk | SRR18714925 | MDR-TB | lineage4.3.3 | None | SRR15316024 | Pre-XDR-TB | lineage2.2.1 | None | SRR8357275 | MDR-TB | lineage2.2.1 | None | ERR10748187 | Pre-XDR-TB | lineage4.3.3 | None | SRR6855822 | Pre-XDR-TB | lineage4.3.2.1;lineage4.3.3 | None | ERR13284749 | MDR-TB | lineage4.8 | None | SRR10380216 | Pre-XDR-TB | lineage4.3.3 | None | SRR6484913 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796355 | Pre-XDR-TB | lineage3.1.2 | in | SRR1181243 | Pre-XDR-TB | lineage4.3.3 | None | ERR5865252 | Pre-XDR-TB | lineage2.2.1 | None | SAMN01925615 | Pre-XDR-TB | lineage4.3.3 | None | ERR8774371 | MDR-TB | lineage4.3.3 | None | SRR1011468 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925660 | Pre-XDR-TB | lineage4.3.3 | None | ERR2510602 | MDR-TB | lineage3 | None | SRR832991 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361995 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971303 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181174 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992615 | XDR-TB | lineage4.3.3 | None | ERR11043570 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093939 | MDR-TB | lineage2.2.2 | None | SRR25207045 | MDR-TB | lineage4.4.2 | None | SRR924226 | Pre-XDR-TB | lineage4.3.3 | None | ERR11067724 | Pre-XDR-TB | lineage1.2.2.2;lineage4.8 | None | ERR4810793 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN01925666 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350427 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350413 | Pre-XDR-TB | lineage4.3.3 | za | SRR28409592 | MDR-TB | lineage2.2.1 | None | SAMN02360550 | MDR-TB | lineage2.2.1 | kr | SAMN01925619 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02360611 | XDR-TB | lineage2.2.2 | kr | ERR5864865 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287777 | MDR-TB | lineage4.3.4.1;lineage4.9 | None | ERR4828067 | MDR-TB | lineage2.2.1 | None | SRR15661588 | MDR-TB | lineage2.2.1.1 | None | SAMN02360628 | MDR-TB | lineage2.2.1 | kr | SAMN02350417 | Pre-XDR-TB | lineage4.3.3 | za | SRR1184297 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488703 | Pre-XDR-TB | lineage4.3.3 | None | SRR847801 | Pre-XDR-TB | lineage4.3.3 | None | ERR4810867 | MDR-TB | lineage2.2.1 | cn | SRR12420468 | MDR-TB | lineage2.2.1;lineage4 | None | ERR4810931 | MDR-TB | lineage2.2.1 | cn | SRR924216 | Pre-XDR-TB | lineage4.3.3 | None | ERR10610299 | MDR-TB | lineage4.3.2.1 | None | ERR8025485 | Pre-XDR-TB | lineage4.3.3 | None | SRR28888068 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785276 | MDR-TB | lineage4.7 | None | SRR28888087 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811324 | Pre-XDR-TB | lineage2.2.1 | cn | ERR11773740 | Pre-XDR-TB | lineage4.3.3 | None | SRR2024949 | Pre-XDR-TB | lineage4.4.2 | cn | ERR7911279 | MDR-TB | lineage2.2.1 | vn | ERR7911295 | Pre-XDR-TB | lineage2.2.1 | vn | ERR4811287 | MDR-TB | lineage2.2.1 | cn | ERR4811298 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911483 | MDR-TB | lineage2.2.1 | vn | ERR4830469 | Pre-XDR-TB | lineage4.3.3 | za | SRR1062843 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911412 | MDR-TB | lineage2.2.1 | us | ERR7911627 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | za | ERR11773752 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911209 | MDR-TB | lineage4.3.3 | za | ERR4831843 | MDR-TB | lineage2.2.1 | vn | ERR9119726 | MDR-TB | lineage2.2.1 | None | ERR7911687 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830515 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830554 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830557 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830506 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830523 | MDR-TB | lineage2.2.1 | za | SRR1180388 | Pre-XDR-TB | lineage4.3.3 | None | SRR15316035 | MDR-TB | lineage2.2.1 | None | SRR17234883 | MDR-TB | lineage4.4.1.1 | None | SRR6257056 | MDR-TB | lineage2.2.1 | None | SRR6339665 | MDR-TB | lineage2.2.1 | None | ERR3639736 | MDR-TB | lineage2.2.1 | None | SRR1172793 | Pre-XDR-TB | lineage4.3.3 | None | ERR11082377 | Pre-XDR-TB | lineage4.7 | None | SRR7341682 | Pre-XDR-TB | lineage4.4.1.1 | ro | SAMN02586103 | MDR-TB | lineage2.2.1 | za | SAMN02586017 | XDR-TB | lineage4.3.3 | za | SAMN02586018 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586041 | Pre-XDR-TB | lineage4.3.3 | za | SRR28394058 | MDR-TB | lineage4.4.1.1 | None | SRR1970693 | MDR-TB | lineage4.9 | None | SRR29772657 | MDR-TB | lineage1.1.2 | None | SAMN02053748 | Pre-XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | SRR1011472 | Pre-XDR-TB | lineage4.3.3 | None | SRR25207365 | MDR-TB | lineage2.2.1 | None | SRR1173789 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | SRR25207358 | MDR-TB | lineage2.2.1 | None | ERR10748172 | MDR-TB | lineage4.1.1.1 | None | SRR832996 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488533 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173449 | Pre-XDR-TB | lineage4.3.3 | None | ERR11082345 | MDR-TB | lineage2.2.1 | None | SRR1011466 | Pre-XDR-TB | lineage4.3.3 | None | SRR10040472 | MDR-TB | lineage2.2.1 | None | SRR10315624 | Pre-XDR-TB | lineage4.3.3 | None | SRR924694 | Pre-XDR-TB | lineage4.3.3 | None | ERR5865254 | Pre-XDR-TB | lineage2.2.1 | None | SAMN03246246 | RR-TB | lineage2.2.1 | cn | ERR5864859 | Pre-XDR-TB | lineage2.2.1 | None | SRR10868994 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315605 | Pre-XDR-TB | lineage4.3.3 | None | SRR924205 | Pre-XDR-TB | lineage4.3.3 | None | ERR13286170 | Pre-XDR-TB | lineage4.3.3 | None | ERR4827551 | MDR-TB | lineage4.8 | None | ERR9992871 | XDR-TB | lineage4.3.3 | None | ERR13288794 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180230 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488574 | Pre-XDR-TB | lineage4.3.3 | None | ERR4810791 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810948 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810951 | Pre-XDR-TB | lineage2.2.1 | cn | ERR8025610 | Pre-XDR-TB | lineage4.3.3 | None | SRR833173 | Pre-XDR-TB | lineage4.3.3 | za | SRR1062823 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173518 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | SRR1019171 | Pre-XDR-TB | lineage4.3.3 | None | SRR25207354 | Pre-XDR-TB | lineage2.2.1 | None | ERR9029846 | MDR-TB | lineage4.3.4.1 | None | SRR24256090 | MDR-TB | lineage4.3.3 | None | SRR10315625 | Pre-XDR-TB | lineage4.3.3 | None | SRR1723507 | MDR-TB | lineage2.2.1 | None | SAMN01925667 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315639 | MDR-TB | lineage2.2.1 | None | ERR11043661 | MDR-TB | lineage4.3.3 | None | SRR1048840 | MDR-TB | lineage2.2.1 | None | SRR1165629 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184320 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993123 | XDR-TB | lineage4.3.3 | None | ERR11773750 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315483 | MDR-TB | lineage2.2.1 | None | ERR4830541 | MDR-TB | lineage2.2.1 | None | ERR13284060 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017155 | RR-TB | lineage2.2.1.2 | None | SRR21276919 | MDR-TB | lineage2.2.1 | None | ERR4827659 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284649 | MDR-TB | lineage4.3.3 | None | SRR29051547 | MDR-TB | lineage4.3.3 | None | ERR5865275 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173251 | MDR-TB | lineage2.2.1 | None | ERR4831526 | Pre-XDR-TB | lineage3 | None | SRR1062824 | Pre-XDR-TB | lineage4.3.3 | None | SRR29231563 | RR-TB | lineage3 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR21887761 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088263 | MDR-TB | lineage2.2.1 | None | SRR29772627 | MDR-TB | lineage1.1.2 | None | ERR13267430 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196542 | XDR-TB | lineage4.3.3 | None | SRR924220 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806996 | Pre-XDR-TB | lineage4.3.3 | None | SRR13423594 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316303 | MDR-TB | lineage2.2.1 | None | ERR13276230 | MDR-TB | lineage2.2.1 | None | ERR11488702 | Pre-XDR-TB | lineage4.3.3 | None | SRR29093616 | Pre-XDR-TB | lineage4.3.3 | None | ERR4872038 | XDR-TB | lineage4.7 | None | SRR9971051 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062840 | Pre-XDR-TB | lineage4.3.3 | None | ERR11044520 | MDR-TB | lineage2.2.1 | None | ERR11488483 | Pre-XDR-TB | lineage4.3.3 | None | ERR4872047 | XDR-TB | lineage4.7 | None | ERR7361977 | Pre-XDR-TB | lineage4.3.3 | None | SRR28923834 | MDR-TB | lineage2.2.2 | None | SRR1180441 | Pre-XDR-TB | lineage4.3.3 | None | SRR20969934 | MDR-TB | lineage4.4.2 | None | SRR1173349 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173180 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737634 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169212 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173780 | Pre-XDR-TB | lineage4.3.3 | None | ERR13288854 | RR-TB | lineage4.3.3 | None | ERR11081077 | MDR-TB | lineage2.2.1 | None | SRR25206977 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971040 | Pre-XDR-TB | lineage4.3.3 | None | ERR5864855 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207096 | Pre-XDR-TB | lineage4.5 | None | SRR6797563 | MDR-TB | lineage4.3.4.2 | None | ERR4813819 | Pre-XDR-TB | lineage4.4.1 | None | SRR11349152 | XDR-TB | lineage4.3.3 | None | ERR13291098 | Pre-XDR-TB | lineage2.2.1 | None | SRR833024 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315583 | Pre-XDR-TB | lineage4.3.3 | None | ERR13288921 | Pre-XDR-TB | lineage4.3.3 | None | SRR25389526 | Pre-XDR-TB | lineage2.2.1 | None | SRR1003108 | MDR-TB | lineage2.2.1 | None | SRR25207223 | MDR-TB | lineage2.2.1 | None | ERR13289280 | Pre-XDR-TB | lineage4.3.3 | None | ERR5864860 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285114 | MDR-TB | lineage4.7 | None | ERR5864853 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971187 | Pre-XDR-TB | lineage4.3.3 | None | ERR13284225 | MDR-TB | lineage2.2.1 | None | SRR1165660 | Pre-XDR-TB | lineage4.3.3 | None | SRR13423552 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR1175065 | Pre-XDR-TB | lineage4.3.3 | None | SRR13449601 | MDR-TB | lineage4.3.3 | None | SRR13449601 | MDR-TB | lineage4.3.3 | None | ERR9119752 | MDR-TB | lineage2.2.1 | None | SRR25207346 | MDR-TB | lineage2.2.1 | None | ERR8774395 | MDR-TB | lineage4.1.1.3 | None | SRR21887691 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423553 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632774 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069386 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827637 | MDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR20969553 | XDR-TB | lineage2.2.1 | None | SRR25207070 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864861 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088471 | MDR-TB | lineage2.2.1 | None | ERR4827947 | MDR-TB | lineage4.8 | None | SRR29017114 | MDR-TB | lineage1.2.2.2 | None | ERR13288743 | Pre-XDR-TB | lineage4.3.3 | None | SRR29772592 | RR-TB | lineage3.1.2.1 | None | ERR5864857 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144815 | Pre-XDR-TB | lineage4.3.3 | None | SRR10040154 | MDR-TB | lineage2.2.1;lineage4.2.2 | None | SRR10040236 | MDR-TB | lineage2.2.1 | None | ERR13290910 | MDR-TB | lineage4.2.2 | None | SRR21887730 | Pre-XDR-TB | lineage2.2.1 | None | SRR29051569 | MDR-TB | lineage4.3.3 | None | SRR1062825 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165315 | XDR-TB | lineage3.1.1;lineage4.3.3 | None | SAMN02053807 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350414 | Pre-XDR-TB | lineage4.3.3 | za | ERR4872044 | XDR-TB | lineage4.7 | None | SRR1062834 | Pre-XDR-TB | lineage4.3.3 | None | ERR4831550 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172323 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173370 | MDR-TB | lineage4.3.3 | None | SAMN01925640 | Pre-XDR-TB | lineage4.3.3 | None | ERR5865164 | MDR-TB | lineage2.2.1 | None | ERR11465081 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011455 | Pre-XDR-TB | lineage4.3.3 | None | SRR29539669 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285740 | MDR-TB | lineage4.3.3 | None | SRR29051328 | MDR-TB | lineage4.3.4.1 | None | SRR924222 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167360 | Pre-XDR-TB | lineage4.3.3 | None | SRR29093913 | Pre-XDR-TB | lineage2.2.2 | None | SRR924231 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830889 | XDR-TB | lineage2.2.1 | None | SRR12420638 | RR-TB | lineage2.2.1 | None | SRR15014667 | MDR-TB | lineage2.2.1 | None | ERR5865276 | Pre-XDR-TB | lineage2.2.1 | None | SRR28888061 | XDR-TB | lineage2.2.1 | None | SRR1174894 | Pre-XDR-TB | lineage2.2.1 | None | SRR924213 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175022 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011454 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925659 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011467 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748074 | Pre-XDR-TB | lineage4.3.3 | None | ERR13266099 | MDR-TB | lineage2.2.1.1 | None | ERR7361962 | Pre-XDR-TB | lineage4.3.3 | None | ERR13260625 | MDR-TB | lineage2.2.1 | None | SAMN01925650 | Pre-XDR-TB | lineage4.3.3 | None | SRR10040349 | MDR-TB | lineage2.2.1 | None | SRR21887692 | Pre-XDR-TB | lineage2.2.1 | None | ERR8773738 | RR-TB | lineage4.3.3 | None | SRR1048841 | MDR-TB | lineage2.2.1 | None | SRR29772390 | MDR-TB | lineage1.1.2 | None | ERR9806901 | Pre-XDR-TB | lineage4.3.3 | None | SRR10040311 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040337 | MDR-TB | lineage1.1.2 | None | SRR10315481 | MDR-TB | lineage2.2.1 | None | SRR12420428 | MDR-TB | lineage2.2.1 | None | ERR5864851 | Pre-XDR-TB | lineage2.2.1 | None | SRR21576613 | MDR-TB | lineage4.2.2 | None | ERR11080938 | MDR-TB | lineage4.1.2.1 | None | SRR1181391 | Pre-XDR-TB | lineage4.3.3 | None | SRR15316372 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723508 | MDR-TB | lineage2.2.1 | None | SRR1184326 | Pre-XDR-TB | lineage4.3.3 | None | SRR833191 | Pre-XDR-TB | lineage4.3.3 | None | SRR21887749 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SAMN02586074 | Pre-XDR-TB | lineage4.3.3 | None | SRR27069376 | MDR-TB | lineage2.2.1 | None | SRR15368767 | RR-TB | lineage2.2.1 | None | ERR9030363 | MDR-TB | lineage1.1.2 | None | SRR1183043 | Pre-XDR-TB | lineage4.3.3 | None | SRR924212 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011458 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062846 | Pre-XDR-TB | lineage4.3.3 | None | ERR13254277 | MDR-TB | lineage4.5 | None | SRR1062839 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180369 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181357 | Pre-XDR-TB | lineage4.3.3 | None | SRR924697 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196530 | Pre-XDR-TB | lineage4.3.3 | None | SRR924214 | Pre-XDR-TB | lineage4.3.3 | None | SRR3055714 | Pre-XDR-TB | lineage4.3.3 | None | ERR13288883 | RR-TB | lineage2.2.1 | None | SRR24256238 | MDR-TB | lineage4.3.3 | None | ERR13267108 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206872 | MDR-TB | lineage2.2.1 | None | ERR6362603 | MDR-TB | lineage2.2.1 | None | ERR7361978 | Pre-XDR-TB | lineage4.3.3 | None | ERR5865923 | MDR-TB | lineage2.2.1 | None | SRR16588746 | MDR-TB | lineage2.2.1 | None | SRR29274775 | MDR-TB | lineage2.2.1 | None | ERR5864849 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864858 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748304 | MDR-TB | lineage2.2.1 | None | SRR9971315 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02403467 | Pre-XDR-TB | lineage4.3.3 | za | ERR4872041 | Pre-XDR-TB | lineage4.7 | None | SAMN01925658 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062835 | Pre-XDR-TB | lineage4.3.3 | None | SRR1723738 | MDR-TB | lineage2.2.1 | None | SRR1196510 | Pre-XDR-TB | lineage4.3.3 | None | SRR22873599 | Pre-XDR-TB | lineage2.2.2 | None | SRR20969667 | MDR-TB | lineage2.2.1 | None | SRR28351324 | Pre-XDR-TB | lineage3;lineage4.4.1.2 | None | ERR11138631 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987394 | MDR-TB | lineage2.2.1 | None | SRR9970997 | Pre-XDR-TB | lineage4.3.3 | None | SRR1723450 | MDR-TB | lineage2.2.1 | None | ERR13286042 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992695 | XDR-TB | lineage4.3.3 | None | SRR10315604 | Pre-XDR-TB | lineage4.3.3 | None | ERR2515622 | Pre-XDR-TB | lineage4.3.2;lineage4.3.3 | za | ERR2515682 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515319 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925651 | Pre-XDR-TB | lineage4.3.3 | None | SAMN03246263 | MDR-TB | lineage2.2.1 | cn | SRR1011463 | Pre-XDR-TB | lineage4.3.3 | None | ERR4829143 | MDR-TB | lineage3.1 | pk | SRR1970692 | MDR-TB | lineage4.9 | None | SRR21690392 | MDR-TB | lineage1.2.1.2.1 | None | ERR11044539 | MDR-TB | lineage2.2.1 | None | SRR15315979 | MDR-TB | lineage2.2.1 | None | SRR833023 | Pre-XDR-TB | lineage4.3.3 | None | SRR20969507 | MDR-TB | lineage2.2.1 | None | SRR20969664 | XDR-TB | lineage2.2.1 | None | SRR13449608 | MDR-TB | lineage4.3.3 | None | SRR13449608 | MDR-TB | lineage4.3.3 | None | SRR833064 | Pre-XDR-TB | lineage4.3.3 | None | SRR15316385 | MDR-TB | lineage2.2.1 | None | SRR1062828 | Pre-XDR-TB | lineage4.3.3 | None | SAMN03246286 | MDR-TB | lineage2.2.1 | cn | SRR9970987 | Pre-XDR-TB | lineage4.3.3 | None | SRR3105752 | MDR-TB | lineage1.2.2.2;lineage4.1.2 | None | ERR13430440 | Pre-XDR-TB | lineage2.2.1 | None | ERR13430444 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207079 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196515 | Pre-XDR-TB | lineage4.3.3 | None | SRR25389527 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184378 | Pre-XDR-TB | lineage4.3.3 | None | SRR28044691 | Pre-XDR-TB | lineage2.2.1 | None | SRR28389869 | MDR-TB | lineage4.1.1.3 | None | SRR25207232 | MDR-TB | lineage2.2.1 | None | SRR28467064 | MDR-TB | lineage2.2.2 | None | SRR1003101 | MDR-TB | lineage2.2.1 | None | ERR9119598 | MDR-TB | lineage5 | None | SAMN02350411 | Pre-XDR-TB | lineage4.3.3 | za | SRR21576642 | MDR-TB | lineage2.2.1 | None | SRR1964918 | MDR-TB | lineage4.9 | None | SRR1173101 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830509 | MDR-TB | lineage2.2.1 | None | SRR28119729 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748488 | MDR-TB | lineage2.2.1 | None | SAMN01925618 | Pre-XDR-TB | lineage4.3.3 | None | ERR4872046 | XDR-TB | lineage4.7 | None | ERR4423712 | MDR-TB | lineage4.1.1.3 | None | ERR13285004 | MDR-TB | lineage4.1.2.1 | None | SRR1013665 | XDR-TB | lineage2.2.2 | None | ERR5865253 | Pre-XDR-TB | lineage2.2.1 | None | SRR28046263 | MDR-TB | lineage3 | None | SRR847800 | Pre-XDR-TB | lineage4.3.3 | za | ERR3275949 | MDR-TB | lineage1.2.1.2.1 | nl | ERR13276154 | MDR-TB | lineage2.2.1 | None | ERR8774370 | MDR-TB | lineage4.3.3 | None | SRR25207299 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284905 | Pre-XDR-TB | lineage4.7 | None | SRR847787 | Pre-XDR-TB | lineage4.3.3 | za | SRR28119710 | MDR-TB | lineage2.2.1 | None | SRR1173448 | Pre-XDR-TB | lineage4.3.3 | None | SRR20969956 | MDR-TB | lineage2.2.1 | None | ERR9992647 | XDR-TB | lineage4.3.3 | None | ERR11138647 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872037 | XDR-TB | lineage4.7 | None | SRR29093286 | Pre-XDR-TB | lineage4.3.3 | None | SRR29017146 | MDR-TB | lineage2.2.2 | None | SRR1011452 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011453 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011457 | Pre-XDR-TB | lineage4.3.3 | None | SRR29385274 | Pre-XDR-TB | lineage2.2.2 | None | ERR13281466 | MDR-TB | lineage4.2.2.1;lineage5 | None | ERR9119966 | MDR-TB | lineage2.2.1 | None | SRR1013542 | MDR-TB | lineage2.2.1 | None | SRR29273897 | Pre-XDR-TB | lineage4.8 | None | SRR12420545 | MDR-TB | lineage2.2.1 | None | SRR25206966 | MDR-TB | lineage2.2.1 | None | SRR28119795 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971039 | XDR-TB | lineage4.3.3 | None | SRR1184342 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173560 | Pre-XDR-TB | lineage4.3.3 | None | SRR12420347 | MDR-TB | lineage2.2.1 | None | SRR16370507 | MDR-TB | lineage4.3.4.1 | None | ERR1034984 | Pre-XDR-TB | lineage4.3.3 | za | ERR9993225 | XDR-TB | lineage4.3.2 | None | SAMN01925641 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773708 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172348 | Pre-XDR-TB | lineage2.2.1 | None | SRR1011456 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488588 | Pre-XDR-TB | lineage4.3.3 | None | SRR25207071 | MDR-TB | lineage2.2.1 | None | SRR1181396 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196504 | Pre-XDR-TB | lineage4.3.3 | None | SRR847792 | Pre-XDR-TB | lineage4.3.3 | za | ERR5864864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830520 | MDR-TB | lineage2.2.1 | None | ERR5864854 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196536 | Pre-XDR-TB | lineage4.3.3 | None | SRR833125 | Pre-XDR-TB | lineage4.3.3 | None | ERR7339135 | MDR-TB | lineage2.2.1 | None | SRR1013541 | MDR-TB | lineage2.2.1 | None | ERR8025486 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315653 | Pre-XDR-TB | lineage4.3.3 | None |
|---|
