lineage | Count |
---|---|
lineage4.9 | 18 |
lineage2.1 | 6 |
lineage3 | 40 |
lineage2.2.1 | 242 |
lineage4 | 3 |
lineage4.2.2 | 4 |
lineage4.7 | 5 |
lineage4.3.3 | 26 |
lineage4.6.1.2 | 7 |
lineage4.4.1.1 | 8 |
lineage4.1.2.1 | 53 |
lineage1.2.1.2 | 2 |
lineage1.1.2 | 12 |
lineage3.1.1 | 8 |
lineage4.8 | 18 |
lineage1.2.2.2 | 5 |
lineage2.2.2 | 24 |
lineage4.2.1 | 3 |
lineage1.1.1.1 | 3 |
lineage2.2.1.1 | 26 |
lineage4.5 | 12 |
lineage4.3.4.2 | 5 |
lineage1.1.1 | 5 |
lineage4.6.1.1 | 4 |
lineage2.2.1;lineage4.4.2 | 1 |
lineage4.2.1.1 | 3 |
lineage4.6.2.2 | 8 |
lineage2.2.1.2 | 2 |
lineage4.4.2 | 6 |
lineage4.4.1.1.1 | 1 |
lineage4.1.3 | 6 |
lineage3.1 | 2 |
lineage4.3.4.1 | 4 |
lineage2.2.1;lineage4 | 1 |
lineage4.3.4.2.1 | 3 |
lineage1.2.1.2.1 | 2 |
lineage6.3.1 | 2 |
lineage4.1.2.1.1 | 1 |
lineage3;lineage4.6.2.1 | 1 |
lineage4.1.1.1 | 2 |
lineage4.1 | 3 |
lineage1.1.3.3;lineage2.2.1 | 1 |
lineage1.1.3.1 | 2 |
lineage2.2.1;lineage4.2.2 | 1 |
lineage4.1.2 | 3 |
lineage4.2.2.2 | 1 |
lineage3.1.2 | 1 |
lineage4.4 | 1 |
spoligotype | Count |
---|---|
None | 597 |
ID | Drug resistance | Lineage | Country iso2 | SRR21700886 | RR-TB | lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | SRR6964506 | MDR-TB | lineage3 | None | DRR130091 | Pre-XDR-TB | lineage2.2.1 | None | DRR130200 | Pre-XDR-TB | lineage4 | None | SRR15316421 | MDR-TB | lineage4.2.2 | None | SRR19276624 | MDR-TB | lineage4.7 | None | ERR551411 | MDR-TB | lineage2.2.1 | None | ERR13258455 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231827 | MDR-TB | lineage4.3.3 | None | ERR13291075 | MDR-TB | lineage2.1 | None | SRR10828202 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662603 | MDR-TB | lineage2.2.1 | None | SRR1167099 | MDR-TB | lineage3 | None | ERR2517064 | MDR-TB | lineage4.6.1.2 | gb | ERR10610186 | MDR-TB | lineage4.4.1.1 | None | SRR12420376 | RR-TB | lineage2.2.1 | None | SRR28888044 | XDR-TB | lineage4.3.3 | None | SRR22251852 | MDR-TB | lineage3 | None | SRR21700853 | RR-TB | lineage4.9 | None | ERR4813202 | XDR-TB | lineage4.1.2.1 | None | ERR7911492 | MDR-TB | lineage2.2.1 | vn | SRR6484855 | MDR-TB | lineage4.1.2.1 | None | SRR22248489 | MDR-TB | lineage1.2.1.2 | None | SRR15014616 | MDR-TB | lineage1.1.2 | None | SRR6831803 | MDR-TB | lineage2.2.1 | None | ERR2516431 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR13258491 | Pre-XDR-TB | lineage2.2.1 | None | ERR3077940 | RR-TB | lineage3.1.1 | None | SRR28888045 | Pre-XDR-TB | lineage4.3.3 | None | ERR1352340 | MDR-TB | lineage2.2.1 | cn | SRR5817468 | MDR-TB | lineage2.2.1 | None | SRR6485020 | MDR-TB | lineage4.8 | None | ERR4831908 | MDR-TB | lineage2.2.1 | vn | ERR4798523 | MDR-TB | lineage1.2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR22528533 | MDR-TB | lineage4.3.3 | None | ERR13285781 | MDR-TB | lineage2.2.1 | None | ERR4827798 | MDR-TB | lineage4.3.3 | None | SRR10040357 | Pre-XDR-TB | lineage2.2.1 | None | ERR3132073 | RR-TB | lineage2.2.2 | None | ERR2041727 | MDR-TB | lineage4.4.1.1 | rs | ERR11081855 | MDR-TB | lineage4.2.1 | None | ERR1035101 | Pre-XDR-TB | lineage1.1.1.1 | vn | SRR11662361 | MDR-TB | lineage2.2.1 | None | ERR1352344 | Pre-XDR-TB | lineage2.2.1 | cn | SRR13180214 | MDR-TB | lineage2.2.2 | None | SRR4033305 | MDR-TB | lineage2.2.1 | za | ERR552772_ERR552771 | MDR-TB | lineage2.2.1 | None | ERR4827422 | MDR-TB | lineage2.2.1 | None | SAMN02586046 | MDR-TB | lineage3.1.1 | za | ERR552772 | MDR-TB | lineage2.2.1 | None | SRR6485112 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830950 | XDR-TB | lineage2.2.1 | np | SRR1723608 | MDR-TB | lineage2.2.1 | None | ERR11043466 | MDR-TB | lineage4.8 | None | ERR4799710 | MDR-TB | lineage4.8 | in | ERR13284867 | MDR-TB | lineage2.2.1 | None | SRR671758 | MDR-TB | lineage2.2.1.1 | cn | ERR270718 | MDR-TB | lineage2.2.2 | None | SRR16370391 | Pre-XDR-TB | lineage2.2.2 | None | SRR12420609 | MDR-TB | lineage2.2.1 | None | SRR11662613 | MDR-TB | lineage2.2.1.1 | None | SRR22424833 | RR-TB | lineage1.2.2.2 | None | SRR12420463 | MDR-TB | lineage2.2.1 | None | SRR16370292 | MDR-TB | lineage4.5 | None | SRR11662207 | MDR-TB | lineage2.2.1 | None | SRR11662359 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169028 | MDR-TB | lineage2.2.1 | None | SRR11972399 | MDR-TB | lineage2.2.1 | None | SRR29017255 | MDR-TB | lineage2.2.1 | None | ERR4813176 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR11662654 | MDR-TB | lineage2.2.1 | None | ERR9125330 | MDR-TB | lineage4.5 | None | ERR278516 | MDR-TB | lineage4.6.1.2 | None | ERR3287375 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR1166176 | MDR-TB | lineage2.2.1 | None | SRR4033237 | MDR-TB | lineage2.2.1 | za | SRR1723789 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040263 | MDR-TB | lineage2.2.1 | None | SRR6484882 | Pre-XDR-TB | lineage2.2.1 | None | ERR1555048 | MDR-TB | lineage4.8 | None | ERR2514550 | MDR-TB | lineage3 | gb | ERR13290746 | MDR-TB | lineage2.2.1 | None | ERR1555047 | MDR-TB | lineage4.8 | None | ERR4827493 | MDR-TB | lineage2.2.1 | None | SRR15316365 | MDR-TB | lineage2.2.1 | None | SRR12420345 | MDR-TB | lineage2.2.1 | None | SRR11662501 | Pre-XDR-TB | lineage2.2.1 | None | SRR13870394 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10680171 | MDR-TB | lineage2.2.1 | None | SRR25207255 | MDR-TB | lineage2.2.1 | None | ERR4813177 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2707114 | MDR-TB | lineage4.3.4.2 | cd | SRR11662492 | MDR-TB | lineage1.1.1 | None | SRR28394025 | MDR-TB | lineage4.8 | None | SRR27241222 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420513 | RR-TB | lineage2.2.1 | None | ERR11081103 | MDR-TB | lineage2.2.1 | None | ERR551828 | MDR-TB | lineage2.2.1 | None | SRR5341311 | Pre-XDR-TB | lineage3 | in | DRR130198 | Pre-XDR-TB | lineage4.9 | None | ERR13290518 | MDR-TB | lineage3 | None | ERR751650 | Pre-XDR-TB | lineage2.2.1 | th | ERR10680024 | MDR-TB | lineage1.1.1 | None | ERR6358849 | MDR-TB | lineage4.6.1.1 | None | ERR551829 | MDR-TB | lineage2.2.1 | None | ERR4811612 | Pre-XDR-TB | lineage2.2.1 | cn | SRR12420365 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700875 | RR-TB | lineage4.9 | None | SRR10040215 | Pre-XDR-TB | lineage2.2.1;lineage4.4.2 | None | SRR5710016 | Pre-XDR-TB | lineage2.2.1.1 | th | SRR11348189 | MDR-TB | lineage4.3.3 | None | ERR1654659 | MDR-TB | lineage4.6.1.2 | None | ERR9119774 | MDR-TB | lineage2.2.2 | None | ERR4813157 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865610 | MDR-TB | lineage4.2.1.1 | None | ERR8774251 | RR-TB | lineage4.6.2.2 | None | SRR12420410 | MDR-TB | lineage2.2.1 | None | ERR11069059 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR1723607 | MDR-TB | lineage2.2.1 | None | ERR4813104 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR29772694 | MDR-TB | lineage3 | None | ERR9806947 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700912 | RR-TB | lineage4.9 | None | ERR5917664 | MDR-TB | lineage2.2.1 | by | ERR7737853 | MDR-TB | lineage2.2.1.1 | None | SRR10397236 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911165 | MDR-TB | lineage2.2.1 | vn | SRR1173389 | RR-TB | lineage2.2.1 | None | SRR21031692 | Pre-XDR-TB | lineage2.2.1 | None | DRR130209 | MDR-TB | lineage2.2.1 | None | SRR25515834 | MDR-TB | lineage4.4.2 | None | SRR16088427 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707165 | MDR-TB | lineage4.3.3 | cd | SRR26936987 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824638 | MDR-TB | lineage2.2.1 | cn | SRR17163495 | MDR-TB | lineage3.1.1 | None | ERR4796473 | MDR-TB | lineage3 | in | ERR13284799 | MDR-TB | lineage4.2.1 | None | ERR4827785 | MDR-TB | lineage2.2.1 | None | ERR4813806 | RR-TB | lineage4.3.3 | br | ERR1213858 | MDR-TB | lineage2.2.1 | kr | SRR28045249 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824535 | MDR-TB | lineage4.5 | cn | SRR21700928 | RR-TB | lineage4.9 | None | SRR26937059 | MDR-TB | lineage2.2.1 | None | SRR21277852 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR5074185 | MDR-TB | lineage2.2.1 | vn | SAMEA2534893 | MDR-TB | lineage2.2.1 | uz | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR2516489 | MDR-TB | lineage4.1.3 | nl | SRR13870385 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR10315608 | Pre-XDR-TB | lineage4.8 | None | SRR20969895 | MDR-TB | lineage2.2.1 | None | SRR27069460 | MDR-TB | lineage2.2.1 | None | ERR4831414 | MDR-TB | lineage2.2.1 | de | SRR12420265 | MDR-TB | lineage2.2.1 | None | SRR29772552 | MDR-TB | lineage3.1 | None | SRR5067435 | MDR-TB | lineage4.2.2 | vn | ERR13195561 | MDR-TB | lineage2.2.2 | None | ERR13261595 | MDR-TB | lineage4.8 | None | SRR17657941 | MDR-TB | lineage4.1.2.1 | None | SRR21700897 | RR-TB | lineage4.9 | None | ERR2516493 | MDR-TB | lineage4.3.4.1 | pe | ERR13289433 | MDR-TB | lineage2.2.1 | None | ERR13291073 | MDR-TB | lineage2.1 | None | ERR7737902 | MDR-TB | lineage3.1.1 | None | SRR15014619 | Pre-XDR-TB | lineage3 | None | SRR6824295 | MDR-TB | lineage2.2.1 | cn | SRR6824364 | Pre-XDR-TB | lineage2.2.1;lineage4 | cn | SRR6832185 | MDR-TB | lineage2.2.1 | None | SRR29017405 | MDR-TB | lineage4.8 | None | ERR13291130 | Pre-XDR-TB | lineage2.2.1 | None | SRR10767003 | MDR-TB | lineage2.2.1.1 | None | ERR3561989 | RR-TB | lineage4.7 | None | SRR29772418 | MDR-TB | lineage1.1.2 | None | ERR9634263 | MDR-TB | lineage4.9 | None | SRR12420467 | MDR-TB | lineage2.2.1 | None | SAMN02231154 | Pre-XDR-TB | lineage4.1.3 | ml | SRR10869220 | MDR-TB | lineage2.2.1.1 | None | SRR26937151 | MDR-TB | lineage2.2.1 | None | ERR10610087 | RR-TB | lineage2.2.1.1 | None | ERR2433013 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR3256281 | MDR-TB | lineage1.2.1.2.1 | ph | SRR10397237 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081025 | MDR-TB | lineage6.3.1 | None | SRR12420791 | MDR-TB | lineage2.2.1 | None | SRR10040505 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13290923 | MDR-TB | lineage2.2.1.1 | None | ERR4813133 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR11662450 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165369 | MDR-TB | lineage3 | None | SRR10040242 | MDR-TB | lineage2.2.1 | None | SRR30180457 | MDR-TB | lineage2.2.1 | None | SRR25207393 | MDR-TB | lineage2.2.1 | None | ERR6362430 | MDR-TB | lineage2.2.2 | None | SRR26937039 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196565 | RR-TB | lineage2.2.1 | None | SRR12416821 | MDR-TB | lineage4.3.3 | None | ERR1352341 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3132274 | MDR-TB | lineage4.1.2.1 | None | ERR760749 | MDR-TB | lineage4.1.2.1.1 | ar | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662526 | MDR-TB | lineage4.5 | None | ERR2707167 | MDR-TB | lineage4.3.3 | cd | SRR13355781 | MDR-TB | lineage2.2.1 | None | SRR10828644 | MDR-TB | lineage2.1 | None | ERR551828_ERR551829 | MDR-TB | lineage2.2.1 | None | SRR15722998 | Pre-XDR-TB | lineage4.2.2 | None | SRR11662656 | MDR-TB | lineage1.1.1 | None | ERR5987185 | MDR-TB | lineage2.2.2 | None | ERR5865056 | MDR-TB | lineage2.2.1 | None | SRR6824517 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1162480 | Pre-XDR-TB | lineage4.1.3 | None | ERR8699192 | MDR-TB | lineage2.2.2 | None | ERR13266403 | MDR-TB | lineage2.2.1 | None | ERR3287871 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR9030413 | MDR-TB | lineage4.8 | None | SRR7652977 | MDR-TB | lineage2.2.1 | None | SRR6930905 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260240 | MDR-TB | lineage4 | None | ERR11043389 | MDR-TB | lineage4.7 | None | ERR11798638 | MDR-TB | lineage4.3.3 | None | SRR1723957 | MDR-TB | lineage4.5 | None | ERR13290519 | MDR-TB | lineage3 | None | ERR1227514 | RR-TB | lineage4.1.2.1 | None | ERR5865611 | MDR-TB | lineage4.2.1.1 | None | ERR552327 | MDR-TB | lineage2.2.1 | None | ERR4872198 | MDR-TB | lineage4.6.2.2 | None | SRR16058058 | MDR-TB | lineage4.5 | None | SRR30180393 | MDR-TB | lineage2.1 | None | ERR4827893 | MDR-TB | lineage2.2.1 | None | SRR29274064 | Pre-XDR-TB | lineage4.8 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498526 | MDR-TB | lineage4.2.1.1 | None | ERR1034863 | MDR-TB | lineage4.3.4.1 | pt | SRR14801634 | MDR-TB | lineage4.3.3 | None | ERR551887_ERR551888 | MDR-TB | lineage4.8 | None | ERR4813096 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR8380891 | MDR-TB | lineage4.1.2.1 | in | SRR5073654 | MDR-TB | lineage2.2.1 | vn | SRR16088428 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260390 | MDR-TB | lineage4.1.2.1 | None | SRR29385491 | MDR-TB | lineage2.2.1 | None | ERR2184286 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR229940 | MDR-TB | lineage2.2.1 | ru | ERR3077937 | MDR-TB | lineage1.1.2 | None | SRR21277021 | RR-TB | lineage2.2.1 | None | ERR552771 | MDR-TB | lineage2.2.1 | None | ERR9119596 | MDR-TB | lineage4.6.2.2 | None | ERR5897097 | MDR-TB | lineage3;lineage4.6.2.1 | None | SRR1166804 | MDR-TB | lineage3 | None | ERR4799141 | MDR-TB | lineage3 | in | ERR11081269 | MDR-TB | lineage4.7 | None | ERR7911160 | MDR-TB | lineage4.5 | vn | ERR11043895 | RR-TB | lineage3 | None | ERR10877872 | MDR-TB | lineage2.2.1 | None | SRR671749 | MDR-TB | lineage4.4.2 | cn | ERR9806666 | RR-TB | lineage2.2.1.1 | None | SRR6257031 | MDR-TB | lineage2.2.1 | None | SRR12420662 | MDR-TB | lineage2.2.1 | None | SRR25206988 | MDR-TB | lineage4.2.2 | None | SRR5153837 | MDR-TB | lineage2.2.1 | None | ERR2516097 | RR-TB | lineage2.2.1.1 | za | SRR21700842 | RR-TB | lineage4.9 | None | SRR1723848 | Pre-XDR-TB | lineage2.2.1 | cn | SRR10305971 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700964 | RR-TB | lineage4.9 | None | SRR21700953 | RR-TB | lineage4.9 | None | SRR10305980 | MDR-TB | lineage2.2.1 | None | SRR1723554 | MDR-TB | lineage2.2.1 | cn | ERR5865055 | MDR-TB | lineage2.2.1 | None | SRR29056129 | MDR-TB | lineage4.1.1.1 | None | ERR2433009 | Pre-XDR-TB | lineage4.3.4.2.1 | None | SRR4033271 | MDR-TB | lineage2.2.1 | za | ERR11138619 | MDR-TB | lineage2.2.1 | None | SRR18714888 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830885 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700805 | RR-TB | lineage4.9 | None | ERR11082205 | MDR-TB | lineage4.3.3 | None | ERR2510562 | RR-TB | lineage3 | pk | SRR12142430 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653239 | MDR-TB | lineage4.3.3 | None | SRR1723568 | MDR-TB | lineage2.2.1 | cn | ERR439968 | MDR-TB | lineage6.3.1 | None | ERR4812952 | Pre-XDR-TB | lineage4.1.2.1 | None | SAMN02584663 | MDR-TB | lineage2.2.1 | md | ERR4827588 | MDR-TB | lineage2.2.1 | None | SRR29230776 | MDR-TB | lineage4.6.1.2 | None | ERR9286056 | RR-TB | lineage4.3.3 | None | ERR4822313 | Pre-XDR-TB | lineage2.2.1 | de | ERR13284812 | MDR-TB | lineage4.3.3 | None | ERR13284899 | MDR-TB | lineage4.1 | None | ERR4796871 | MDR-TB | lineage3 | in | ERR2510318 | MDR-TB | lineage3 | None | SRR30180327 | MDR-TB | lineage2.2.1 | None | ERR7911151 | Pre-XDR-TB | lineage2.2.2 | vn | SRR2100904 | MDR-TB | lineage4.6.1.2 | None | SRR10726044 | MDR-TB | lineage1.1.2 | None | SRR11662691 | Pre-XDR-TB | lineage1.1.3.3;lineage2.2.1 | None | SRR21700864 | RR-TB | lineage4.9 | None | ERR551807 | MDR-TB | lineage4.1.2.1 | None | SRR21747064 | MDR-TB | lineage2.2.1 | None | ERR3148059 | MDR-TB | lineage3 | None | ERR3132148 | MDR-TB | lineage4.1.2.1 | None | SRR15368760 | MDR-TB | lineage2.2.1 | None | SRR15014614 | MDR-TB | lineage3.1 | None | SRR11662164 | MDR-TB | lineage1.1.2 | None | ERR5866022 | MDR-TB | lineage2.2.1 | None | SRR10397239 | Pre-XDR-TB | lineage2.2.1 | None | ERR12118009 | MDR-TB | lineage4 | None | SRR671751 | Pre-XDR-TB | lineage4.5 | cn | ERR2517106 | MDR-TB | lineage2.2.2 | gb | ERR11043027 | MDR-TB | lineage4.2.1 | None | ERR9992794 | Pre-XDR-TB | lineage2.2.2 | None | SRR16588747 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813132 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1162836 | MDR-TB | lineage3 | None | ERR9993227 | XDR-TB | lineage2.2.1 | None | ERR2179640 | MDR-TB | lineage4.5 | None | ERR5979473 | MDR-TB | lineage3 | None | SRR9971127 | Pre-XDR-TB | lineage4.8 | None | SRR6824559 | MDR-TB | lineage2.2.1 | cn | ERR551412 | MDR-TB | lineage2.2.1 | None | SRR25207259 | MDR-TB | lineage2.2.1 | None | SRR25207286 | Pre-XDR-TB | lineage4.4.2 | None | ERR2706975 | MDR-TB | lineage4.6.1.2 | cd | ERR5866023 | MDR-TB | lineage2.2.1 | None | SRR6824470 | Pre-XDR-TB | lineage2.2.1 | cn | SRR29772746 | MDR-TB | lineage1.2.2.2 | None | ERR4830832 | MDR-TB | lineage3.1.1 | et | SRR25827536 | Pre-XDR-TB | lineage3 | None | SRR1642991 | RR-TB | lineage4.1.2.1 | None | SRR6824651 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR026443 | MDR-TB | lineage4.1.3 | None | SRR6832609 | MDR-TB | lineage2.2.1 | None | SRR16370380 | MDR-TB | lineage2.2.1.1 | None | SRR28045625 | MDR-TB | lineage1.1.3.1 | None | ERR13291136 | MDR-TB | lineage2.2.1.1 | None | ERR13289295 | MDR-TB | lineage2.2.1 | None | SRR25515865 | MDR-TB | lineage2.2.1 | None | SRR29772532 | MDR-TB | lineage3 | None | SRR28706646 | Pre-XDR-TB | lineage2.2.1 | None | ERR3148062 | MDR-TB | lineage4.1 | None | ERR13243544 | MDR-TB | lineage2.2.2 | None | ERR3794501 | MDR-TB | lineage2.2.1 | None | SRR10305984 | Pre-XDR-TB | lineage2.2.1 | None | ERR688024 | MDR-TB | lineage1.1.2 | None | ERR9993228 | XDR-TB | lineage2.2.1 | None | ERR551411_ERR551412 | MDR-TB | lineage2.2.1 | None | SRR26937009 | MDR-TB | lineage2.2.1 | None | ERR1035351 | MDR-TB | lineage4.3.4.1 | br | SRR6824288 | MDR-TB | lineage2.2.1 | cn | ERR3639809 | MDR-TB | lineage4.4.1.1 | None | SRR1723792 | MDR-TB | lineage2.2.1 | cn | ERR3335737 | MDR-TB | lineage3 | pk | ERR13284489 | MDR-TB | lineage4.1.2.1 | None | ERR11043831 | MDR-TB | lineage4.4.1.1 | None | ERR3794514 | MDR-TB | lineage2.2.1 | None | SRR21700816 | RR-TB | lineage4.9 | None | SRR10305926 | MDR-TB | lineage2.2.1 | None | SRR10040161 | MDR-TB | lineage2.2.1;lineage4.2.2 | None | SRR10808353 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR11662263 | MDR-TB | lineage1.1.3.1 | None | SRR7069511 | MDR-TB | lineage2.2.2 | None | ERR4827655 | MDR-TB | lineage4.8 | None | ERR502243 | MDR-TB | lineage4.6.2.2 | None | SRR8923700 | MDR-TB | lineage4.1.2 | None | SRR11662433 | MDR-TB | lineage1.1.1.1 | None | SRR28393441 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10680136 | MDR-TB | lineage2.2.1 | None | ERR13267496 | RR-TB | lineage3 | None | ERR13290521 | MDR-TB | lineage3 | None | SRR10397149 | MDR-TB | lineage2.2.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR21277270 | MDR-TB | lineage4.4.2 | None | SRR13870413 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR5865911 | MDR-TB | lineage2.2.1 | None | ERR2653226 | MDR-TB | lineage4.3.4.1 | None | SRR1184364 | RR-TB | lineage2.2.1 | None | SRR12416819 | RR-TB | lineage2.2.1 | None | ERR4831604 | MDR-TB | lineage2.2.1 | vn | ERR552658 | MDR-TB | lineage2.2.1 | None | SRR12420284 | MDR-TB | lineage2.2.1 | None | SRR29385414 | Pre-XDR-TB | lineage4.5 | None | ERR718502 | MDR-TB | lineage1.2.2.2 | th | SRR25395652 | MDR-TB | lineage4.3.3 | None | ERR9806845 | RR-TB | lineage2.2.1.1 | None | ERR6358846 | MDR-TB | lineage4.6.1.1 | None | SRR28045591 | MDR-TB | lineage4.2.2.2 | None | SRR1172744 | MDR-TB | lineage3.1.1 | None | SRR11662314 | MDR-TB | lineage2.2.1 | None | ERR4872115 | MDR-TB | lineage4.6.2.2 | None | ERR4813095 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29017537 | MDR-TB | lineage4.4.1.1 | None | ERR13195611 | MDR-TB | lineage2.2.2 | None | ERR2677388 | MDR-TB | lineage2.2.1 | de | SRR11662288 | MDR-TB | lineage2.1 | None | SRR11662184 | MDR-TB | lineage2.2.1 | None | ERR8774249 | MDR-TB | lineage4.6.2.2 | None | ERR8025583 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256144 | Pre-XDR-TB | lineage2.2.1 | None | SRR26936948 | MDR-TB | lineage1.1.1.1 | None | ERR1035349 | MDR-TB | lineage4.3.4.2.1 | br | ERR1035100 | Pre-XDR-TB | lineage2.2.1.1 | vn | SRR5709888 | Pre-XDR-TB | lineage2.2.1 | th | ERR9119900 | MDR-TB | lineage2.2.2 | None | ERR2513046 | RR-TB | lineage3 | gb | SRR21576592 | MDR-TB | lineage2.2.1.1 | None | SRR10808626 | MDR-TB | lineage4.1.2.1 | None | ERR1352342 | Pre-XDR-TB | lineage2.2.1 | cn | SRR25340883 | MDR-TB | lineage1.1.2 | None | SRR25827305 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277271 | MDR-TB | lineage4.4.2 | None | ERR12117972 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR20969468 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662224 | MDR-TB | lineage2.2.1.1 | None | SRR4423147 | Pre-XDR-TB | lineage3 | None | SRR1184357 | MDR-TB | lineage3.1.1 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | ERR2510416 | MDR-TB | lineage1.1.2 | pk | ERR3287419 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR10397233 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397240 | Pre-XDR-TB | lineage2.2.1 | None | ERR10610212 | RR-TB | lineage2.2.1.1 | None | SAMEA2533923 | MDR-TB | lineage2.2.1 | sl | SRR2100828 | MDR-TB | lineage2.2.2 | None | SAMEA2534221 | MDR-TB | lineage2.2.1 | uz | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR25395597 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737832 | MDR-TB | lineage4.6.2.2 | None | ERR13284955 | MDR-TB | lineage4.7 | None | SAMN02414938 | MDR-TB | lineage3 | se | ERR4831837 | MDR-TB | lineage2.2.1 | None | ERR11082743 | MDR-TB | lineage2.2.1 | None | SAMEA2534268 | MDR-TB | lineage4.8 | uz | ERR7911495 | MDR-TB | lineage2.2.2 | vn | DRR130147 | RR-TB | lineage2.2.1 | None | SRR10306028 | MDR-TB | lineage4.5 | None | ERR2516738 | XDR-TB | lineage4.1.2.1 | pe | SRR29093939 | MDR-TB | lineage2.2.2 | None | SRR25206880 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911127 | MDR-TB | lineage2.2.1 | vn | ERR13290799 | MDR-TB | lineage2.2.1 | None | ERR4830983 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831801 | MDR-TB | lineage2.2.1 | vn | SRR1103621 | Pre-XDR-TB | lineage4.1.3 | None | SRR10040299 | MDR-TB | lineage2.2.1 | None | ERR10680016 | MDR-TB | lineage1.1.1 | None | ERR987778 | MDR-TB | lineage4.3.4.2 | None | ERR8976027 | RR-TB | lineage2.2.1.1 | None | ERR4800690 | Pre-XDR-TB | lineage2.2.1 | None | SRR4033294 | MDR-TB | lineage2.2.1 | za | SRR1723644 | MDR-TB | lineage2.2.1 | cn | SRR1196499 | MDR-TB | lineage3.1.1 | None | ERR13284994 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR15316322 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368839 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR10680117 | MDR-TB | lineage2.2.1 | None | SRR6930925 | MDR-TB | lineage1.2.1.2.1 | None | SRR29017088 | MDR-TB | lineage3 | None | SRR3647359 | MDR-TB | lineage2.2.1 | None | SRR11662210 | MDR-TB | lineage2.2.1 | None | SRR7653084 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813117 | XDR-TB | lineage4.1.2.1 | None | ERR1199109 | MDR-TB | lineage4.6.1.2 | cd | ERR4812869 | MDR-TB | lineage4.1.2.1 | None | SRR4033318 | MDR-TB | lineage2.2.1 | za | SRR21576676 | MDR-TB | lineage4.4.2 | None | SRR2024976 | MDR-TB | lineage2.2.1 | cn | ERR6358870 | RR-TB | lineage4.6.1.1 | None | ERR11488863 | MDR-TB | lineage4.1.2 | None | ERR13267067 | RR-TB | lineage2.2.1 | None | ERR040141 | MDR-TB | lineage3 | ug | ERR11082842 | MDR-TB | lineage4.3.3 | None | ERR7737650 | MDR-TB | lineage2.2.1.1 | None | SRR6964542 | MDR-TB | lineage3 | None | SRR21700975 | RR-TB | lineage4.9 | None | SRR28044767 | XDR-TB | lineage3.1.2 | None | ERR3287862 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR10854752 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798946 | MDR-TB | lineage1.1.2 | in | ERR4811380 | MDR-TB | lineage2.2.1 | None | ERR11082932 | MDR-TB | lineage4.1.2.1 | None | SRR1162773 | Pre-XDR-TB | lineage4.1.3 | None | ERR10680083 | MDR-TB | lineage4.1 | None | SRR28393768 | MDR-TB | lineage2.2.1 | None | SRR5007182 | MDR-TB | lineage3 | None | SRR28393433 | MDR-TB | lineage4.1.2.1 | None | ERR13288891 | MDR-TB | lineage4.4.1.1 | None | ERR13290741 | MDR-TB | lineage2.2.1 | None | SAMN03246351 | MDR-TB | lineage2.2.1 | cn | SRR28394221 | MDR-TB | lineage4.1.2.1 | None | SRR28393788 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2510619 | Pre-XDR-TB | lineage3 | pk | ERR8774378 | MDR-TB | lineage2.2.1 | None | SRR29539139 | MDR-TB | lineage2.2.1 | None | ERR9030256 | RR-TB | lineage2.2.1.1 | None | ERR4799063 | MDR-TB | lineage2.2.1 | in | ERR4813126 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4813200 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR5865054 | MDR-TB | lineage2.2.1 | None | ERR6358847 | MDR-TB | lineage4.6.1.1 | None | SRR10397235 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806849 | MDR-TB | lineage4.4.1.1 | None | SRR21700821 | RR-TB | lineage4.9 | None | ERR2653178 | MDR-TB | lineage4.3.3 | None | ERR3132080 | MDR-TB | lineage2.2.2 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR6832782 | MDR-TB | lineage2.2.1 | None | ERR11082741 | MDR-TB | lineage2.2.1 | None | ERR10762473 | MDR-TB | lineage2.2.1 | None | ERR3287820 | XDR-TB | lineage4.1.2.1 | pe | SRR16370236 | MDR-TB | lineage2.2.1 | None | SRR1723701 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR1352343 | Pre-XDR-TB | lineage2.2.1 | cn | SRR4033260 | MDR-TB | lineage2.2.1 | za | ERR11082611 | MDR-TB | lineage2.2.1 | None | SRR21277512 | RR-TB | lineage2.2.1 | None | ERR13093937 | MDR-TB | lineage4.1.1.1 | None | ERR2516498 | MDR-TB | lineage4.3.3 | nl | SRR6824403 | MDR-TB | lineage2.2.1 | cn | ERR3132088 | MDR-TB | lineage2.2.1 | None | ERR9119521 | MDR-TB | lineage4.6.2.2 | None | DRR130182 | MDR-TB | lineage2.2.1 | None | ERR9117829 | MDR-TB | lineage2.2.2 | None | ERR10680103 | MDR-TB | lineage1.1.1 | None | ERR1213825 | MDR-TB | lineage4.1.2.1 | pe | ERR1213853 | MDR-TB | lineage2.2.2 | kr | SRR12420756 | MDR-TB | lineage2.2.1 | None | ERR3148058 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714921 | MDR-TB | lineage2.2.1 | None | SRR5007187 | MDR-TB | lineage3 | None | SRR21700794 | RR-TB | lineage4.9 | None | SRR21700939 | RR-TB | lineage4.9 | None | SRR29681333 | MDR-TB | lineage2.2.1 | None | SRR13870372 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR2510396 | MDR-TB | lineage3 | pk | ERR4827895 | MDR-TB | lineage2.2.1 | None | ERR3287623 | MDR-TB | lineage2.2.1 | pe | SRR16088361 | MDR-TB | lineage2.2.1 | None | SRR12142373 | MDR-TB | lineage2.2.1 | None | SRR12420831 | Pre-XDR-TB | lineage2.2.1 | None | SRR6964549 | MDR-TB | lineage3 | None | SRR20970004 | MDR-TB | lineage2.2.1 | None | ERR11775070 | MDR-TB | lineage4.3.3 | None | SRR29273774 | Pre-XDR-TB | lineage4.8 | None | SRR25515243 | MDR-TB | lineage2.2.1 | None | SRR28706381 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044449 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR28393273 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR1034592 | MDR-TB | lineage1.1.2 | pk | ERR2510342 | Pre-XDR-TB | lineage3 | pk | SRR29538928 | MDR-TB | lineage2.2.1 | None | ERR4813205 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR30180336 | Pre-XDR-TB | lineage2.2.1 | None | ERR8773933 | MDR-TB | lineage4.1.2.1 | None | ERR11488849 | MDR-TB | lineage4.1.2 | None | SRR4033248 | MDR-TB | lineage2.2.1 | za | ERR13283997 | RR-TB | lineage3 | None | ERR2184393 | MDR-TB | lineage4.1.2.1 | pe | ERR2307375 | MDR-TB | lineage2.2.1 | None | ERR7911152 | MDR-TB | lineage2.2.1.1 | vn | ERR9811805 | MDR-TB | lineage4.8 | None | SRR8847014 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02586026 | RR-TB | lineage2.2.1 | za | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024956 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4813124 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR26937038 | MDR-TB | lineage2.2.1 | None | ERR2510466 | MDR-TB | lineage3 | pk | SRR25389496 | MDR-TB | lineage2.2.2 | None | SRR10397201 | MDR-TB | lineage2.2.1 | None | SRR27980491 | MDR-TB | lineage4.4.1.1 | None | SRR28394228 | MDR-TB | lineage4.1.2.1 | None | SRR2024988 | Pre-XDR-TB | lineage2.2.1 | cn | SRR27069447 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285067 | MDR-TB | lineage4.3.3 | None | ERR13290696 | MDR-TB | lineage1.2.1.2 | None | SRR28393362 | MDR-TB | lineage4.1.2.1 | None | SRR17657925 | MDR-TB | lineage2.2.2 | None | SRR29772501 | MDR-TB | lineage1.1.2 | None | ERR2041761 | MDR-TB | lineage4.1.2.1 | rs | SRR21747021 | RR-TB | lineage4.5 | None | ERR13260548 | RR-TB | lineage4.3.3 | None | SRR15315757 | MDR-TB | lineage2.2.1 | None | SRR28393786 | MDR-TB | lineage4.3.4.2 | None | ERR13266884 | Pre-XDR-TB | lineage4.3.3 | None | ERR3132106 | MDR-TB | lineage4.4 | None | ERR9030450 | MDR-TB | lineage4.8 | None | SRR10397234 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043146 | MDR-TB | lineage4.1.2.1 | None | SRR26937149 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706606 | MDR-TB | lineage2.2.1 | None | SRR6824376 | MDR-TB | lineage2.2.1 | cn | ERR8773935 | MDR-TB | lineage4.1.2.1 | None |
---|