Rv0668 - c.1879T>C
Drug resistance types
11 Sensitive
0 RR-TB
16 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 12 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.9 | 5 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| 3 | |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1.1;lineage4.2.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La1.7;lineage4.9 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 43 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2512593 | Sensitive | lineage4.2.1 | gb | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR6650233 | Sensitive | lineage1.1.3.1 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6152870 | Other | lineage4.2.1 | ca | SRR6045526 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR28044742 | Sensitive | lineage4.2.1 | None | SRR21676314 | Sensitive | lineage4.2.1 | None | SRR25827682 | Other | None | ERR234659 | Other | None | SRR28045805 | Sensitive | lineage4.2.1 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR29052697 | Sensitive | lineage4.2.1 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4796417 | Sensitive | lineage4.2.1 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR2513480 | Sensitive | lineage4.2.1 | gb | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4797093 | Sensitive | lineage2.2.1.1;lineage4.2.1 | in | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR990545 | Other | lineage3 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4815955 | Sensitive | lineage4.2.1 | gb | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR13289867 | Sensitive | lineage4.2.1 | None | SRR1180226 | HR-TB | lineage4.9 | None |
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