Rv0668 - c.3514_3516delTCGinsGC
Drug resistance types
0 Sensitive
4 RR-TB
15 HR-TB
12 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 3 |
| lineage6.1.1 | 2 |
| lineage4.9 | 26 |
| lineage2.2 | 3 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage3 | 4 |
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.8 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 57 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10808668 | Other | lineage2.2.1 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | SRR6045217 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR6045548 | Other | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR14782054 | Other | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR6046593 | Other | lineage4.9 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR9786076 | Other | lineage3 | None | SRR3675270 | Other | lineage4.9 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6045347 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR736831 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4799025 | Other | lineage4.8 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR323037 | Other | lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4769450 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR987722 | MDR-TB | None | SRR5341330 | Other | lineage4.9 | None |
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