Rv0682 - c.-363A>G

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
8 Sensitive 4 RR-TB 30 HR-TB 10 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 32 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.9 3
La1.7;M.canetti;lineage4.9 3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 6
lineage2.1;lineage4.9 6
La3;lineage4.9 2
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9 11
La1.7 2
La2;lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.3.2.1 7
La2;lineage4.9 1
lineage4.3.4 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4 1
M.canetti;lineage2.1;lineage6.3 2
lineage2.2.1 2
lineage4.1.1.1 2
3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 2
La1.7;lineage4.9 3
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage2.2.1.1;lineage4.3.2.1 2
lineage4.9;lineage6.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 85
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR29096140 Sensitive lineage4.3.2.1 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR29096333 Sensitive lineage4.3.2.1 None
ERR161039 Sensitive lineage4.3.4 None
ERR10610081 RR-TB lineage4.3.2.1 None
ERR161037 Other lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4816585 Other lineage2.2.1 None
SRR6325447 HR-TB lineage4.1.1.1 None
ERR4816656 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR234659 Other None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4819422 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4830353 Other La1.7 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4817731 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172817 Other La3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR29097002 Sensitive lineage2.2.1.1;lineage4.3.2.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4819241 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR10610102 RR-TB lineage4.3.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
ERR4011924 Sensitive lineage4.3.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9806663 RR-TB lineage4.3.2.1 None
ERR108126 Sensitive lineage4.3.2.1 za
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR29093586 Sensitive lineage2.2.1.1;lineage4.3.2.1 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR212123 Other lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None