lineage | Count |
---|---|
89 | |
lineage3.1 | 2 |
lineage4.9 | 19 |
lineage4.1.2.1 | 2 |
lineage4 | 37 |
La1.8.1 | 1 |
La1 | 1 |
lineage5.2 | 2 |
lineage4.5 | 1 |
lineage4.1 | 1 |
lineage4.1.1 | 1 |
lineage2.2.1 | 3 |
lineage4.8 | 1 |
lineage2.2 | 1 |
lineage4.4.1.1 | 1 |
lineage1.1 | 1 |
spoligotype | Count |
---|---|
None | 163 |
ID | Drug resistance | Lineage | Country iso2 | ERR502889 | Other | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323041 | HR-TB | None | SRR7535086 | Other | None | ERR323038 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283024 | Other | None | ERR3283025 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797061 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797044 | Other | None | ERR3797083 | HR-TB | None | ERR3797069 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR6358837 | HR-TB | None | ERR5336148 | Other | None | ERR702406 | HR-TB | None | ERR736874 | HR-TB | None | ERR736867 | HR-TB | None | ERR9117709 | HR-TB | None | ERR8976043 | HR-TB | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR12416824 | HR-TB | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR13837519 | Sensitive | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR3675465 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR161033 | HR-TB | None | ERR4815296 | Sensitive | lineage4 | None | ERR158583 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | SRR3675383 | HR-TB | None | ERR1949956 | Sensitive | lineage4.8 | None | SRR3675502 | Other | None | ERR4816999 | Other | None | SRR3675522 | Other | None | SRR3675550 | Other | None | SRR3675545 | HR-TB | None | SRR5341418 | Other | None | SRR3675558 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR5341396 | Other | lineage4 | None | ERR4817060 | RR-TB | None | SRR3675572 | Other | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR2693231 | Other | None | SRR5341333 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341302 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693239 | HR-TB | None | SRR6045450 | Other | lineage4.9 | None | ERR2693230 | Other | None | SRR6045503 | HR-TB | None | ERR2693254 | Other | None | SRR6045706 | Sensitive | lineage4 | None | ERR2693257 | Other | None | ERR278594 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6045399 | Other | None | SRR6325442 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831117 | HR-TB | None | ERR294248 | HR-TB | None |
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