Rv1854c - c.549T>C
Drug resistance types
5 Sensitive
1 RR-TB
61 HR-TB
0 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| 65 | |
| lineage2.2 | 3 |
| lineage4.1 | 1 |
| La1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.8 | 1 |
| lineage2.2.1 | 2 |
| lineage4.7 | 3 |
| lineage4 | 3 |
| lineage3.1 | 2 |
| La1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 85 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13861500 | RR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR14782405 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR4815604 | HR-TB | None | SRR23961549 | Other | La1.2 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR158583 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675486 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | SRR3675270 | HR-TB | None | ERR4816466 | HR-TB | None | ERR2229140 | Other | lineage4.8 | None | ERR212123 | Other | None | SRR5266539 | Pre-XDR-TB | lineage2.2.1 | None | ERR234659 | HR-TB | None | SRR5341418 | Other | None | SRR5341302 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR2660435 | Sensitive | lineage4.7 | None | SRR5535933 | HR-TB | None | ERR2660467 | Sensitive | lineage4.7 | None | ERR2660480 | Sensitive | lineage4.7 | None | SRR6045399 | Other | None | SRR6045053 | Other | None | ERR278594 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046046 | Other | None | SRR6046362 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831117 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311099 | HR-TB | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323039 | HR-TB | None | ERR323063 | HR-TB | None | ERR323043 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR5311090 | HR-TB | None | ERR067681 | HR-TB | None | ERR3283017 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR3283021 | HR-TB | None | ERR3439432 | Other | None | ERR4769452 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4769450 | HR-TB | None | ERR736839 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4798406 | HR-TB | None | ERR6358837 | HR-TB | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | SRR1196546 | HR-TB | None | ERR736874 | HR-TB | None | ERR8976043 | HR-TB | None | SRR1184294 | HR-TB | None |
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