SRR1048987
|
HR-TB
|
lineage2.2.1
|
None
|
SAMN02360563
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SAMN02360577
|
HR-TB
|
lineage3
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
SRR1013589
|
HR-TB
|
lineage2.2.1
|
None
|
SAMN02360583
|
HR-TB
|
lineage2.2.2
|
None
|
SRR1048991
|
HR-TB
|
lineage2;lineage4.9
|
None
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
SRR1048983
|
HR-TB
|
lineage2.2.1.1
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
SRR1047996
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1048885
|
HR-TB
|
lineage2.2;lineage4
|
None
|
SRR1048982
|
HR-TB
|
lineage2.2.1.1
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR1048998
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
SRR1049041
|
HR-TB
|
lineage2.2.1;lineage4
|
None
|
SRR1048986
|
HR-TB
|
lineage2.2.1
|
None
|
SAMN02360591
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1049023
|
HR-TB
|
lineage4.9
|
None
|
SRR1048985
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1048981
|
HR-TB
|
lineage3
|
None
|
SRR1048886
|
HR-TB
|
lineage2.2.2;lineage4
|
None
|
SRR1049007
|
HR-TB
|
lineage2.2.2
|
None
|
SAMN02360570
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1013621
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1048965
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1048997
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1144744
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
SRR1013577
|
HR-TB
|
lineage2.2.2
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
SRR1013601
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR7801175
|
HR-TB
|
lineage4.6.5
|
None
|
SRR1049005
|
MDR-TB
|
lineage2.2.2
|
None
|
SAMN02360556
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
SAMN02360571
|
HR-TB
|
lineage2.2.1;lineage2.2.2
|
None
|
SAMN02360590
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
SAMN02360595
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1013570
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMN02360585
|
HR-TB
|
lineage4.5
|
None
|
SRR1013569
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMN02360574
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1013554
|
MDR-TB
|
lineage2.2.2;lineage4
|
None
|
SRR1048870
|
HR-TB
|
lineage2.2.1;lineage2.2.2
|
None
|
SRR1013603
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1013578
|
HR-TB
|
lineage2.2.2;lineage4
|
None
|
SRR1048975
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1048988
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1049027
|
HR-TB
|
lineage2.2.2;lineage4.9
|
None
|
SRR1047993
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1049026
|
HR-TB
|
lineage2.2;lineage4.9
|
None
|
SRR1048968
|
HR-TB
|
lineage2.2.1;lineage2.2.2
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
SRR1013567
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1048966
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1013630
|
Pre-XDR-TB
|
lineage2.2.2;lineage4
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR3445502
|
Sensitive
|
lineage4.9;lineage7
|
None
|
SRR1144809
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
SRR1048980
|
HR-TB
|
lineage3
|
None
|
SRR1049004
|
HR-TB
|
lineage2.2.2
|
None
|
SRR1013590
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
SRR1048993
|
HR-TB
|
lineage4.9
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
SRR1048994
|
HR-TB
|
lineage4.9
|
None
|
SAMN02360580
|
HR-TB
|
lineage2.2.1
|
None
|
SAMN02360581
|
HR-TB
|
lineage2.2.1
|
None
|
SAMN02360586
|
HR-TB
|
lineage2.2.1
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
SRR1013568
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1048995
|
HR-TB
|
lineage4.5
|
None
|
SRR1048866
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR1048869
|
HR-TB
|
lineage2.2.1;lineage2.2.2
|
None
|
SRR1049040
|
HR-TB
|
lineage2
|
None
|
SRR1013629
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
SRR1048853
|
HR-TB
|
lineage2;lineage4.9
|
None
|
SAMN02360564
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1013599
|
HR-TB
|
lineage2.2.1.1;lineage4
|
None
|
ERR5311094
|
HR-TB
|
lineage4.9
|
None
|
SAMN02360562
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR1049006
|
HR-TB
|
lineage2.2.2;lineage4
|
None
|
SAMN02360579
|
HR-TB
|
lineage2.2.1.1
|
None
|
ERR3275996
|
HR-TB
|
lineage4.3.4.1
|
nl
|