lineage | Count |
---|---|
83 | |
lineage4.6.2.2 | 2 |
lineage2.2 | 4 |
lineage4.1.2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage6.3.1 | 1 |
lineage4 | 4 |
lineage4.9 | 7 |
lineage2.2.1 | 2 |
lineage3.1 | 2 |
lineage2 | 2 |
lineage4.1 | 1 |
lineage4.8 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.5 | 1 |
lineage4.1.1 | 1 |
lineage4.8;La3 | 1 |
La2 | 1 |
La1 | 1 |
spoligotype | Count |
---|---|
None | 117 |
ID | Drug resistance | Lineage | Country iso2 | ERR702406 | HR-TB | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR736874 | HR-TB | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR8976043 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR1172234 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR1169194 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1173363 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173629 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173778 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR13861428 | Other | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR15368973 | Other | None | SRR25827682 | Other | None | ERR11081257 | Other | lineage4.8 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675311 | Other | None | SRR3675486 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675221 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR4817060 | RR-TB | None | SRR3675545 | HR-TB | None | SRR3742665 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818394 | Other | lineage4.9 | None | ERR234659 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341302 | HR-TB | None | SRR6325444 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045399 | Other | None | ERR278594 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046540 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR502524 | HR-TB | La2 | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6789626 | Other | None | ERR5311090 | HR-TB | None | ERR502532 | HR-TB | None | ERR323038 | HR-TB | None | SRR7496517 | Other | None | SRR7535086 | Other | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR3283027 | HR-TB | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR323063 | HR-TB | None | ERR3797069 | Other | None | ERR3797016 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR5336148 | Other | None | ERR4811142 | MDR-TB | None |
---|