lineage | Count |
---|---|
81 | |
lineage4.5 | 1 |
lineage2.1 | 2 |
lineage4.1.1 | 1 |
lineage2.2.1 | 3 |
lineage2 | 3 |
lineage4.9;La3 | 1 |
lineage4.8 | 1 |
lineage4.4.1.1 | 1 |
lineage2.2 | 1 |
lineage4.1.2.1 | 3 |
lineage4.1.2 | 1 |
lineage4.9 | 6 |
lineage4 | 3 |
lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 109 |
ID | Drug resistance | Lineage | Country iso2 | SRR19304036 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR4815604 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675383 | HR-TB | None | ERR4816999 | Other | None | SRR3675545 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4817735 | Other | lineage4.8 | None | SRR3742665 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4816585 | Other | lineage2.2 | None | ERR234659 | HR-TB | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818394 | Other | lineage4.9 | None | ERR4818615 | Other | None | SRR5341333 | HR-TB | None | SRR5341302 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046066 | HR-TB | None | ERR323043 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR7535086 | Other | None | SRR6046540 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496517 | Other | None | ERR3283027 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR4407463 | HR-TB | None | ERR3797069 | Other | None | ERR4188350 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR736867 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR5863845 | MDR-TB | lineage2.2.1 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR736874 | HR-TB | None | ERR8976043 | HR-TB | None | SRR1172951 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1169194 | Other | None | ERR9786671 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173118 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173166 | Other | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR1173778 | Other | None | SRR1184372 | MDR-TB | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196566 | HR-TB | None | SRR13837525 | Sensitive | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1710057 | Other | lineage2.1 | None |
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