Rv3423c - c.309T>C
Drug resistance types
26 Sensitive
0 RR-TB
14 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 2 |
| M.canetti | 33 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage1.1.3.2 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 3 |
| La2;M.canetti | 1 |
| lineage4.9 | 3 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| 2 | |
| La1.7;lineage4.9 | 2 |
| La3;M.canetti | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 60 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4815361 | Other | M.canetti | None | SRR10177259 | Other | M.canetti | None | ERR266106 | Sensitive | M.canetti | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR18289196 | Sensitive | M.canetti | None | SRR30182404 | Sensitive | lineage1.1.3.2 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR10177260 | Other | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3597005 | Sensitive | M.canetti | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR3283042 | Other | lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR10177263 | Sensitive | M.canetti | None | SRR10177258 | Other | M.canetti | None | SRR5818661 | Other | M.canetti | dj | ERR552305 | Sensitive | M.canetti | None | SRR24061598 | Sensitive | M.canetti | None | SRR28170812 | Sensitive | M.canetti | None | SRR10177262 | Sensitive | M.canetti | None | ERR234659 | Other | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3597003 | Sensitive | M.canetti | None | ERR266121 | Sensitive | M.canetti | None | ERR266122 | Sensitive | La3;M.canetti | None | SRR5818567 | Other | M.canetti | dj | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR266107 | Other | M.canetti | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR551055 | Sensitive | M.canetti | None | SRR5818614 | Sensitive | M.canetti | dj | SRR10177261 | Sensitive | M.canetti | None | ERR551056 | Sensitive | M.canetti | None | ERR266110 | Other | M.canetti | None | ERR266108 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | SRR5818652 | Sensitive | M.canetti | dj | SRR5818653 | Sensitive | M.canetti | dj | ERR4816019 | Sensitive | M.canetti | None | ERR266109 | Sensitive | M.canetti | None | SRR5818676 | Other | M.canetti | dj | ERR3283018 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR212001 | HR-TB | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR5818668 | Sensitive | M.canetti | dj |
|---|
