Rv3596c - c.2370C>T
Drug resistance types
63 Sensitive
4 RR-TB
18 HR-TB
11 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.1.2 | 82 |
| lineage4.2.1.1 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.1.2;lineage4.8 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage2.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.5 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4.1.2 | 3 |
| lineage4.3.2.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 116 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR13265648 | Sensitive | lineage4.1.2 | None | ERR13265487 | Sensitive | lineage4.1.2 | None | ERR13265391 | Sensitive | lineage4.1.2 | None | ERR9119197 | HR-TB | lineage4.1.2 | None | SRR16103901 | HR-TB | lineage4.1.2 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR3725682 | Sensitive | lineage4.1.2 | None | ERR13265071 | Sensitive | lineage4.1.2 | None | ERR2516659 | MDR-TB | lineage4.1.2 | nl | ERR495152 | HR-TB | lineage4.1.2 | None | ERR13260253 | HR-TB | lineage4.1.2 | None | ERR13266236 | Sensitive | lineage4.1.2 | None | ERR13265754 | Sensitive | lineage4.1.2 | None | ERR13265740 | Sensitive | lineage4.1.2 | None | SRR5074141 | HR-TB | lineage4.1.2 | vn | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR13265710 | Sensitive | lineage4.1.2 | None | ERR13266278 | Sensitive | lineage4.1.2 | None | ERR13265429 | Sensitive | lineage4.1.2 | None | ERR13266302 | Sensitive | lineage4.1.2 | None | ERR13265008 | Sensitive | lineage4.1.2 | None | ERR13265816 | Sensitive | lineage4.1.2 | None | ERR13265603 | Sensitive | lineage4.1.2 | None | ERR8699840 | Sensitive | lineage4.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR28393347 | MDR-TB | lineage4.1.2 | None | ERR1035109 | HR-TB | lineage4.1.2 | vn | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR13265493 | Sensitive | lineage4.1.2 | None | ERR13265191 | Sensitive | lineage4.1.2 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR9286043 | Sensitive | lineage4.1.2 | None | ERR8700390 | RR-TB | lineage4.1.2 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR1633923 | HR-TB | lineage4.1.2 | za | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR13292041 | HR-TB | lineage4.1.2 | None | ERR13265296 | Sensitive | lineage4.1.2 | None | ERR13265127 | Sensitive | lineage4.1.2 | None | SRR6480406 | Sensitive | lineage4.1.2;lineage4.8 | None | ERR13265961 | Sensitive | lineage4.1.2 | None | ERR13265297 | Sensitive | lineage4.1.2 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4830303 | HR-TB | lineage4.1.2 | vn | SRR29096223 | Sensitive | lineage4.1.2 | None | ERR13265510 | Sensitive | lineage4.1.2 | None | ERR13265553 | Sensitive | lineage4.1.2 | None | ERR13266219 | Sensitive | lineage4.1.2 | None | SRR16101276 | HR-TB | lineage4.1.2 | None | SRR28046027 | HR-TB | lineage4.1.2 | None | SRR29053503 | Sensitive | lineage4.1.2 | None | ERR13265595 | Sensitive | lineage4.1.2 | None | ERR13265101 | Sensitive | lineage4.1.2 | None | ERR13265267 | Sensitive | lineage4.1.2 | None | ERR13266005 | Other | lineage4.1.2 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR13265824 | Sensitive | lineage4.1.2 | None | ERR13265288 | Sensitive | lineage4.1.2 | None | SRR16370686 | Sensitive | lineage4.1.2 | None | ERR13264980 | Sensitive | lineage4.1.2 | None | ERR279621 | HR-TB | lineage4.1.2 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR13265112 | Sensitive | lineage4.1.2 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR13266205 | Sensitive | lineage4.1.2 | None | ERR13265492 | Sensitive | lineage4.1.2 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR26112674 | HR-TB | lineage4.1.2 | None | ERR13266386 | Sensitive | lineage4.1.2 | None | ERR775363 | MDR-TB | lineage4.1.2 | pe | ERR11067635 | Sensitive | lineage4.5 | None | ERR11082060 | Sensitive | lineage4.1.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR13265509 | Sensitive | lineage4.1.2 | None | SRR3724987 | Sensitive | lineage4.1.2 | None | ERR2516514 | Pre-XDR-TB | lineage4.1.2 | pe | ERR8699115 | Sensitive | lineage4.1.2 | None | ERR13265802 | Sensitive | lineage4.1.2 | None | SRR22048391 | Sensitive | lineage4.1.2 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR13265390 | Sensitive | lineage4.1.2 | None | ERR8686172 | Sensitive | lineage4.1.2 | None | ERR13266176 | Sensitive | lineage4.1.2 | None | ERR13265386 | Sensitive | lineage4.1.2 | None | ERR13266225 | MDR-TB | lineage2.2.1;lineage4.1.2 | None | ERR13292062 | HR-TB | lineage4.1.2 | None | ERR13266316 | Sensitive | lineage2.2.1;lineage4.1.2 | None | ERR13265773 | Sensitive | lineage4.1.2 | None | ERR13266276 | Sensitive | lineage4.1.2 | None | SRR28170765 | Sensitive | lineage4.1.2 | None | SRR21711125 | HR-TB | lineage4.1.2 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR13265921 | Sensitive | lineage4.1.2 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR13265224 | Sensitive | lineage4.1.2 | None | ERR13266349 | Sensitive | lineage4.1.2 | None | SRR29772809 | MDR-TB | lineage1.1.2 | None | SRR6797546 | Other | lineage4.1.2 | None | ERR13266224 | Sensitive | lineage4.1.2 | None | SRR26399684 | HR-TB | lineage4.1.2 | None | SRR27449991 | Sensitive | lineage4.1.2 | None | SRR10808730 | Other | lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR11972382 | Sensitive | lineage2.2.1;lineage4.1.2 | None | ERR11050605 | Sensitive | lineage4.1.2 | None | SRR27450300 | Sensitive | lineage4.1.2 | None |
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