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SRA data
Rv3596c
- c.2370C>T
Drug resistance types
63 Sensitive
4 RR-TB
18 HR-TB
11 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.1.2
82
lineage2.2.1;lineage4.1.2
3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
3
lineage2.2.1.1
2
M.canetti;lineage4.6.4;lineage4.9
2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
1
lineage4.3.2.1
1
M.canetti;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
116
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1035109
HR-TB
lineage4.1.2
vn
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR11050605
Sensitive
lineage4.1.2
None
ERR11067635
Sensitive
lineage4.5
None
ERR11082060
Sensitive
lineage4.1.2
None
ERR13260253
HR-TB
lineage4.1.2
None
ERR13264980
Sensitive
lineage4.1.2
None
ERR13265008
Sensitive
lineage4.1.2
None
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