EBG00000313325 - n.825_829delGGGTT
Drug resistance types
0 Sensitive
2 RR-TB
5 HR-TB
8 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 2 |
| lineage4.3.3 | 2 |
| lineage4.1.2 | 2 |
| lineage4.2.2 | 2 |
| lineage3 | 6 |
| lineage4.8 | 8 |
| La1.7;lineage2.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1 | 7 |
| lineage3.1.1 | 3 |
| lineage4.4.1.1 | 4 |
| lineage4.3.2 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.9 | 4 |
| lineage4.1.2.1 | 6 |
| lineage4.3.4.2 | 2 |
| lineage4.1.1.1 | 1 |
| lineage3.1.2 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.4.2 | 1 |
| lineage4.5 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.8.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage6.3.2 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.2.1.1;lineage4.8 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.7 | 2 |
| lineage4.1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12062482 | MDR-TB | lineage2.2.1.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342683 | Other | lineage4.1.2 | None | ERR3559290 | HR-TB | lineage4.2.2 | None | SRR7070553 | Other | lineage3 | None | SRR11342669 | Other | lineage4.8 | None | SRR20969923 | Other | La1.7;lineage2.2.1 | None | SRR14782113 | Pre-XDR-TB | lineage4.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349182 | MDR-TB | lineage2.2.1 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR21240202 | HR-TB | lineage4.4.1.1 | None | ERR3804166 | Other | lineage4.3.2 | None | SRR7069687 | Other | lineage4.1.1.3.1 | None | ERR2660505 | Other | lineage1.2.2.1 | None | ERR3261359 | Other | lineage4.9 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | ERR9117725 | Other | lineage4.1.1.1 | None | ERR9117714 | Other | lineage3.1.2 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675452 | Other | lineage3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR6855828 | Other | lineage4.3.2.1 | None | SRR20969951 | Other | lineage4.4.2 | None | SRR6824324 | Other | lineage4.5 | None | ERR867566 | Other | lineage4.9 | None | ERR3261389 | Other | lineage4.9 | None | ERR3559289 | HR-TB | lineage4.2.2 | None | ERR7821182 | Other | lineage1.1.3.2 | None | SRR7069760 | Other | lineage3 | None | SRR19303907 | Other | lineage4.8 | None | SRR6045909 | Other | lineage4.8.1 | None | ERR9786452 | Other | lineage4.3.2 | None | SRR1735599 | Other | lineage1.2.2.2 | None | SRR2101627 | Other | lineage4.1.2.1 | None | SRR6045110 | Other | lineage3 | None | ERR5336160 | Other | lineage6.3.2 | None | SRR7070596 | Other | lineage4.8 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR4863405 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR7069628 | Other | lineage4.1.2.1 | None | SRR7069013 | Other | lineage4.8 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR7070266 | Other | lineage1.1.2 | None | SRR7069216 | Other | lineage4.1.2.1 | None | SRR7070154 | Other | lineage4.4.1.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR2516042 | Other | lineage4.1.1.3 | za | SRR6046291 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6896535 | Other | lineage4.1.1.3 | None | ERR2027252 | Other | lineage4.2.1.1;lineage4.8 | None | SRR14802219 | Other | lineage4.8 | None | ERR3261351 | Other | lineage4.9 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | SRR7069164 | Other | lineage4.8 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR9971351 | RR-TB | lineage2.2.1 | None | SRR11349151 | MDR-TB | lineage2.2.1 | None | SRR6045599 | Other | lineage4.8 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045199 | Other | lineage2.2.1 | None | SRR7069669 | Other | lineage3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR6045024 | Other | lineage4.1.1.2 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR7131201 | Other | lineage4.8 | None | ERR867520 | Other | lineage4.7 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR6045726 | Other | lineage3 | None | SRR9971369 | MDR-TB | lineage4.1.1.3 | None | ERR2027256 | Other | lineage4.1.2 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR2515818 | Other | lineage4.3.2.1 | za |
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