EBG00000313339 - n.1879C>A
Drug resistance types
11 Sensitive
4 RR-TB
8 HR-TB
10 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 2 |
| lineage4.9 | 11 |
| lineage2.2.1 | 4 |
| lineage4 | 7 |
| lineage4.1.1.3 | 4 |
| lineage4;lineage2 | 1 |
| lineage3 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8 | 1 |
| lineage1.1.1 | 1 |
| lineage4.7 | 2 |
| lineage4.8;lineage4.3.3 | 4 |
| La1.8.1 | 1 |
| La2 | 1 |
| lineage3.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814639 | HR-TB | lineage4 | None | ERR1750899 | Sensitive | lineage4.1.1.3 | zw | ERR4816762 | Other | lineage4;lineage2 | None | ERR1750922 | Sensitive | lineage4.1.1.3 | za | SRR3675391 | Sensitive | lineage3 | gb | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4817532 | Sensitive | lineage3 | gb | ERR4819314 | Other | lineage1.1.1 | None | ERR4829903 | Sensitive | lineage4.7 | it | SRR6045359 | Sensitive | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | SRR6397617 | Sensitive | lineage2.2.1 | ca | ERR036207 | Other | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR13888780 | Sensitive | La2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None |
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