EBG00000313339 - n.2101_2104delACCC
Drug resistance types
3 Sensitive
11 RR-TB
8 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 10 |
| lineage2.2.1 | 5 |
| lineage4.2.1 | 3 |
| 4 | |
| lineage4.4.1.1 | 1 |
| lineage2.2 | 1 |
| lineage4.9 | 10 |
| lineage4.3.3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.8 | 4 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.5 | 1 |
| lineage6 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.9;lineage3 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.6.5 | 2 |
| lineage4.3.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 68 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173719 | HR-TB | lineage3 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16156832 | RR-TB | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR19303949 | Other | lineage4.3.3 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303907 | Other | lineage4.8 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4814776 | Sensitive | lineage3 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4818003 | Other | lineage1.2.1.2.1 | gb | SRR3675513 | Other | lineage4.8 | None | ERR4817342 | Other | lineage4.1.1 | None | ERR4817840 | Other | lineage3.1.2.2 | gb | ERR4817907 | Other | lineage3 | gb | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4816417 | Other | lineage4.9 | None | ERR2509886 | RR-TB | lineage3 | None | ERR2512529 | Sensitive | lineage4.1.1.3.1 | gb | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4818370 | Other | lineage4.1.1 | None | ERR4818574 | Other | lineage6 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4818583 | Other | lineage4.3.3 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4819080 | Other | lineage4.1.2.1 | gb | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR6046113 | Other | lineage4.1.1.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR6046087 | Other | None | ERR4822035 | Other | lineage4.8 | None | ERR4821492 | HR-TB | lineage3 | None | ERR4819332 | Other | lineage3 | gb | ERR2514565 | Other | lineage3.1.2.1 | gb | SRR6044873 | Other | lineage4.1.1.3.1 | None | ERR4829333 | RR-TB | lineage4 | None | SRR6044993 | Other | lineage3 | None | SRR6045052 | HR-TB | lineage4.2.1.1 | None | ERR2851354 | RR-TB | lineage4.9 | None | SRR6046239 | Other | lineage4.9;lineage3 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046497 | Other | lineage4.9 | None | SRR6982530 | Other | lineage1.2.2.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796588 | Other | lineage4 | None | SRR7131196 | Other | lineage4.8 | None | SRR9940974 | Other | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR4188158 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR1172987 | HR-TB | lineage4.9 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9117732 | Other | lineage1.2.2.2 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR1173310 | MDR-TB | None |
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