EBG00000313339 - n.871T>C
Drug resistance types
30 Sensitive
0 RR-TB
1 HR-TB
2 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 1 |
| lineage4.9 | 12 |
| lineage1.2.2.2 | 2 |
| lineage2.2.2;lineage4 | 2 |
| lineage2.2.1 | 7 |
| 1 | |
| lineage2.2.1.1 | 3 |
| lineage1.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 36 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR212042 | HR-TB | lineage3.1.1 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | ERR2307789 | MDR-TB | lineage2.2.1 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR144568 | Sensitive | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR176771 | Sensitive | lineage4.3.4.2.1 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR473304 | Sensitive | lineage2.2.1 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | ERR502482 | Sensitive | lineage4.9 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1049030 | Sensitive | lineage4.9 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None |
|---|
