Rv0005 - c.942C>T
Drug resistance types
12 Sensitive
0 RR-TB
10 HR-TB
0 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage4.9 | 15 |
| lineage4.1.2.1 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage3 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.9;lineage6.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 31 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR212034 | HR-TB | La1.7;lineage4.9 | None |
| ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None |
| SRR19295647 | Sensitive | lineage4.9 | None |
| ERR926165 | Sensitive | lineage4.9 | None |
| ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None |
| ERR926155 | Sensitive | lineage4.9 | None |
| ERR9786911 | HR-TB | lineage4.1.2.1 | None |
| ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
| ERR926157 | Sensitive | lineage4.9 | None |
| ERR11252736 | Other | lineage4.9 | None |
| ERR6359066 | HR-TB | lineage4.9 | None |
| ERR971389 | Sensitive | lineage4.9 | None |
| ERR4819546 | HR-TB | lineage3 | None |
| ERR926164 | Other | lineage4.9 | None |
| ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
| ERR176560 | HR-TB | La1.7;lineage4.9 | None |
| ERR3806850 | HR-TB | lineage4.1.2.1 | None |
| SRR10808668 | Sensitive | lineage2.2.1 | None |
| SRR6046611 | Sensitive | lineage4.9 | None |
| SRR5341373 | Other | lineage4.9 | None |
| SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| ERR736848 | Other | lineage4.9 | None |
| ERR067712 | Sensitive | lineage4.9 | None |
| ERR926160 | Sensitive | lineage4.9 | None |
| ERR4769474 | HR-TB | lineage4.9 | None |
| ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
| SRR26159066 | Sensitive | lineage4.9 | None |
| SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None |
| SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
| SRR28044873 | Pre-XDR-TB | lineage3 | None |
