ERR2184648
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28858722
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813075
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
ERR775377
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR2516686
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR3287709
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR6866223
|
Other
|
lineage4.1.1
|
None
|
SRR29126376
|
Sensitive
|
lineage4.1.1
|
None
|
SRR29126396
|
Sensitive
|
lineage4.1.1
|
None
|
SRR29126424
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813137
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
SRR29690808
|
Other
|
lineage4.1.1
|
None
|
SRR29126296
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28394118
|
Other
|
lineage4.1.1
|
None
|
ERR3287522
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR13285517
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4025111
|
HR-TB
|
lineage4.1.1
|
None
|
ERR11081107
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812448
|
Other
|
lineage4.1.1;lineage4.1.2.1
|
pe
|
ERR4812998
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR751520
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR4178155
|
Other
|
lineage4.1.1
|
None
|
SRR10808384
|
Sensitive
|
lineage4.1.1
|
None
|
SRR22528559
|
Sensitive
|
lineage4.1.1
|
None
|
SRR22528558
|
Sensitive
|
lineage4.1.1
|
None
|
SRR21710931
|
Sensitive
|
lineage4.1.1
|
None
|
ERR3287702
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR2510205
|
HR-TB
|
lineage4.1.1
|
pe
|
SRR22528532
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866272
|
Other
|
lineage4.1.1
|
None
|
ERR7911013
|
RR-TB
|
lineage4.1.1
|
pe
|
ERR4813481
|
Other
|
lineage4.1.1
|
None
|
ERR4812833
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR6866306
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR13261615
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6865595
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6865691
|
Other
|
lineage4.1.1
|
None
|
ERR779919
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR6865590
|
Other
|
lineage4.1.1
|
None
|
ERR9121762
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866175
|
Sensitive
|
lineage4.1.1;lineage4.1.2.1
|
None
|
ERR6866973
|
Other
|
lineage4.1.1
|
None
|
SRR26112279
|
RR-TB
|
lineage4.1.1
|
None
|
ERR13260265
|
HR-TB
|
lineage4.1.1
|
None
|
SRR26112165
|
Sensitive
|
lineage4.1.1
|
None
|
SRR22528571
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR29126343
|
Sensitive
|
lineage4.1.1
|
None
|
SRR16370476
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4812385
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR6865869
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4024796
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866286
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR6866394
|
Other
|
lineage4.1.1
|
None
|
ERR12117936
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR6866154
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812682
|
Sensitive
|
lineage4.1.1
|
None
|
ERR7910861
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR6866072
|
Other
|
lineage4.1.1
|
None
|
ERR4812650
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813106
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6865659
|
HR-TB
|
lineage4.1.1
|
None
|
SRR8698508
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR2184677
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR6865736
|
Other
|
lineage4.1.1
|
None
|
SRR18909912
|
RR-TB
|
lineage4.1.1
|
None
|
SRR19276612
|
HR-TB
|
lineage4.1.1
|
None
|
SRR22528526
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6866989
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813150
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
SRR19276640
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6865658
|
HR-TB
|
lineage4.1.1
|
None
|
ERR13260637
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6865847
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4024752
|
Other
|
lineage4.1.1
|
None
|
ERR6866262
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2184259
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR6865516
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2516724
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR19325577
|
Sensitive
|
lineage4.1.1
|
None
|
SRR22528582
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
SRR28394226
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.1
|
None
|
ERR4812062
|
Other
|
lineage4.1.1
|
pe
|
ERR4812406
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4812759
|
Sensitive
|
lineage4.1.1;lineage4.1.2.1
|
pe
|
ERR6865466
|
Other
|
lineage4.1.1
|
None
|
SRR26112426
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2184441
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4178189
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866750
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866982
|
Other
|
lineage4.1.1
|
None
|
ERR7910995
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
ERR3287731
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR4813206
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
ERR13292220
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2516499
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
ERR6865401
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812677
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4178219
|
Pre-XDR-TB
|
lineage4.1.1;lineage4.1.2.1
|
None
|
SRR26111905
|
Sensitive
|
lineage4.1.1
|
None
|
ERR11043263
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4829474
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2184684
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR6865307
|
Sensitive
|
lineage4.1.1
|
None
|
ERR11082594
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813008
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR13260427
|
HR-TB
|
lineage4.1.1
|
None
|
ERR4813498
|
Other
|
lineage2.2.1;lineage4.1.1
|
None
|
ERR4813391
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR6866173
|
Sensitive
|
lineage4.1.1
|
None
|
SRR18665454
|
Sensitive
|
lineage4.1.1
|
None
|
ERR7911341
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR3287859
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR16101264
|
Other
|
lineage4.1.1
|
None
|
SRR10808821
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR17234885
|
Other
|
lineage4.1.1
|
None
|
ERR4024736
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2184358
|
Other
|
lineage4.1.1
|
None
|
SRR19317570
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813591
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR13291671
|
Sensitive
|
lineage4.1.1
|
None
|
ERR13292481
|
Other
|
lineage4.1.1
|
None
|
ERR4813494
|
Other
|
lineage4.1.1
|
None
|
SRR29341568
|
Sensitive
|
lineage4.1.1
|
None
|
ERR3287647
|
HR-TB
|
lineage4.1.1
|
pe
|
ERR4813341
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
SRR19276632
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6865344
|
Other
|
lineage4.1.1
|
None
|
SRR18914022
|
Sensitive
|
lineage4.1.1
|
None
|
SRR16915780
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812174
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR6866430
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812065
|
Other
|
lineage4.1.1
|
None
|
ERR4812439
|
Sensitive
|
lineage4.1.1
|
pe
|
SRR28859946
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4024805
|
HR-TB
|
lineage4.1.1
|
None
|
SRR22461690
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR28393663
|
MDR-TB
|
lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2
|
None
|
ERR6866872
|
Other
|
lineage4.1.1
|
None
|
ERR13291181
|
RR-TB
|
lineage4.1.1
|
None
|
ERR13291385
|
Sensitive
|
lineage4.1.1
|
None
|
ERR13291513
|
Sensitive
|
lineage4.1.1
|
None
|
ERR751413
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR29666879
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4811721
|
Sensitive
|
lineage4.1.1
|
pe
|
SRR28860009
|
Sensitive
|
lineage4.1.1
|
None
|
ERR13260638
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR13260645
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4813236
|
Other
|
lineage4.1.1
|
pe
|
ERR6865724
|
Other
|
lineage4.1.1
|
None
|
ERR6866776
|
Sensitive
|
lineage4.1.1
|
None
|
ERR751534
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR10808573
|
Sensitive
|
lineage4.1.1
|
None
|
SRR13870381
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
SRR16089390
|
RR-TB
|
lineage4.1.1
|
None
|
SRR28394179
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4812994
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR4813325
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR2184208
|
HR-TB
|
lineage4.1.1
|
pe
|
ERR2184282
|
RR-TB
|
lineage4.1.1
|
pe
|
ERR2184554
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR2184577
|
Other
|
lineage4.1.1
|
pe
|
ERR2516713
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR28394263
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6866937
|
Other
|
lineage4.1.1
|
None
|
ERR4972496
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR13260266
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4811694
|
Other
|
lineage4.1.1
|
pe
|
ERR4812646
|
Other
|
lineage4.1.1
|
pe
|
ERR4812889
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
SRR10808887
|
Sensitive
|
lineage4.1.1
|
None
|
ERR751352
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR28859949
|
RR-TB
|
lineage4.1.1
|
None
|
SRR16370443
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4024792
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4025128
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812743
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR4813123
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR4813138
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
SRR29055977
|
Sensitive
|
lineage4.1.1
|
None
|
SRR21722239
|
Sensitive
|
lineage4.1.1
|
None
|
SRR21728172
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812381
|
Other
|
lineage4.1.1
|
pe
|
ERR6866317
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813426
|
HR-TB
|
lineage4.1.1
|
pe
|
ERR4024776
|
Other
|
lineage4.1.1
|
None
|
ERR1023385
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812558
|
Other
|
lineage4.1.1
|
pe
|
ERR4812583
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4813003
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR26112214
|
Sensitive
|
lineage4.1.1
|
None
|
ERR3287624
|
HR-TB
|
lineage4.1.1
|
pe
|
ERR6866820
|
Sensitive
|
lineage4.1.1
|
None
|
SRR21690152
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28393922
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR28394037
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6866531
|
Other
|
lineage4.1.1
|
None
|
ERR4812976
|
HR-TB
|
lineage4.1.1
|
pe
|
ERR6866899
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4178213
|
Sensitive
|
lineage4.1.1
|
None
|
SRR10808570
|
Sensitive
|
lineage4.1.1
|
None
|
SRR10808854
|
Other
|
lineage2.2.1;lineage4.1.1
|
None
|
ERR4024836
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4178185
|
Other
|
lineage4.1.1
|
None
|
ERR4812619
|
Other
|
lineage4.1.1
|
pe
|
ERR4812674
|
Other
|
lineage4.1.1
|
None
|
ERR4024657
|
Other
|
lineage4.1.1
|
None
|
SRR28393406
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28393938
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR28394056
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR7910866
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR4811661
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4811735
|
Other
|
lineage4.1.1
|
pe
|
SRR19241773
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4829553
|
Sensitive
|
lineage4.1.1
|
it
|
ERR4812534
|
Other
|
lineage4.1.1
|
pe
|
ERR4813580
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813626
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR4024524
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28394248
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR6866765
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6865335
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812274
|
Sensitive
|
lineage4.1.1
|
None
|
SRR7781505
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR22528524
|
Sensitive
|
lineage4.1.1
|
None
|
SRR22528580
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812415
|
Sensitive
|
lineage4.1.1
|
pe
|
SRR29053602
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6865520
|
Other
|
lineage4.1.1
|
None
|
ERR6865495
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866917
|
Other
|
lineage4.1.1
|
None
|
ERR13292357
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813598
|
HR-TB
|
lineage4.1.1
|
None
|
ERR4813615
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR26112246
|
Sensitive
|
lineage4.1.1
|
None
|
SRR22528578
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4813399
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR6865451
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4024672
|
Other
|
lineage4.1.1
|
None
|
ERR3287689
|
HR-TB
|
lineage4.1.1;lineage4.1.2.1
|
pe
|
SRR10808627
|
Sensitive
|
lineage4.1.1
|
None
|
ERR7910882
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR13261662
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR779903
|
MDR-TB
|
lineage4.1.1;lineage4.3.4.2
|
pe
|
SRR29126848
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866031
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4812816
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4024685
|
Other
|
lineage4.1.1
|
None
|
ERR6865775
|
Pre-XDR-TB
|
lineage4.1.1;lineage4.1.2.1
|
None
|
ERR6866258
|
Other
|
lineage4.1.1
|
None
|
ERR751380
|
Sensitive
|
lineage4.1.1
|
pe
|
SRR22536495
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR4812672
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812728
|
Other
|
lineage4.1.1
|
pe
|
ERR3287712
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
ERR6865357
|
Other
|
lineage4.1.1
|
None
|
SRR28394014
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
SRR28393322
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR29053438
|
Sensitive
|
lineage4.1.1
|
None
|
SRR3732724
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812408
|
Other
|
lineage4.1.1
|
pe
|
ERR13291271
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4024532
|
Other
|
lineage4.1.1
|
None
|
ERR4024987
|
Other
|
lineage4.1.1
|
None
|
ERR4813373
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR2184392
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4812975
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR6866205
|
Other
|
lineage4.1.1
|
None
|
ERR3287653
|
HR-TB
|
lineage4.1.1
|
pe
|
ERR6865769
|
Sensitive
|
lineage4.1.1
|
None
|
ERR779893
|
HR-TB
|
lineage4.1.1
|
pe
|
ERR4811691
|
Other
|
lineage4.1.1
|
pe
|
ERR4178169
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812956
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR28394161
|
Other
|
lineage4.1.1;lineage4.1.2
|
None
|
ERR2516518
|
Sensitive
|
lineage4.1.1
|
pe
|
SRR28860062
|
Sensitive
|
lineage4.1.1
|
None
|
SRR29053071
|
Sensitive
|
lineage4.1.1
|
None
|
SRR16370474
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR6865852
|
Other
|
lineage4.1.1
|
None
|
ERR6866985
|
Other
|
lineage4.1.1
|
None
|
ERR2184580
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4828851
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR13583315
|
HR-TB
|
lineage4.1.1
|
None
|
SRR10808615
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28394138
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR29052976
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4024602
|
Sensitive
|
lineage4.1.1
|
None
|
ERR751388
|
HR-TB
|
lineage4.1.1
|
pe
|
ERR6865471
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28393736
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28394250
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4812703
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR6865395
|
Sensitive
|
lineage4.1.1
|
None
|
ERR3132201
|
HR-TB
|
lineage4.1.1
|
None
|
ERR6866377
|
HR-TB
|
lineage4.1.1
|
None
|
ERR6866715
|
Other
|
lineage4.1.1
|
None
|
ERR3287724
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR4828929
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR28858441
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28859792
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2184447
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR6866789
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2516598
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
ERR4812641
|
Other
|
lineage4.1.1
|
None
|
ERR4812653
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4813456
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
ERR6865319
|
HR-TB
|
lineage4.1.1
|
None
|
SRR13870373
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
SRR13870393
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
SRR22528557
|
Sensitive
|
lineage4.1.1
|
None
|
SRR26112456
|
Sensitive
|
lineage4.1.1
|
None
|
SRR24827278
|
RR-TB
|
lineage4.1.1
|
None
|
SRR28393357
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR6865313
|
Sensitive
|
lineage4.1.1
|
None
|
SRR29126309
|
Sensitive
|
lineage4.1.1
|
None
|
SRR22461581
|
MDR-TB
|
lineage4.1.1;lineage4.3.3
|
None
|
ERR4812221
|
Other
|
lineage4.1.1
|
pe
|
SRR22461579
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR29055773
|
Other
|
lineage4.1.1
|
None
|
ERR6866606
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR13260643
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR4024948
|
Sensitive
|
lineage4.1.1
|
None
|
ERR1034790
|
HR-TB
|
lineage4.1.1
|
pe
|
SRR10808331
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR10808359
|
RR-TB
|
lineage4.1.1
|
None
|
ERR4811917
|
Other
|
lineage4.1.1
|
pe
|
ERR4812451
|
Other
|
lineage4.1.1
|
pe
|
ERR4812985
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR4813446
|
HR-TB
|
lineage4.1.1
|
pe
|
SRR26112580
|
Sensitive
|
lineage4.1.1
|
None
|
SRR29052978
|
Sensitive
|
lineage4.1.1
|
None
|
ERR13260674
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6866305
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR21710673
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813691
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR2516517
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR28170759
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4024558
|
Other
|
lineage4.1.1
|
None
|
ERR4024593
|
Other
|
lineage2.2.1;lineage4.1.1;lineage4.8
|
None
|
ERR11043193
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2516523
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR7910884
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR21677255
|
Sensitive
|
lineage4.1.1
|
None
|
SRR21685376
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6865942
|
Other
|
lineage2.2.1;lineage4.1.1;lineage4.8
|
None
|
ERR13260641
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR13261638
|
HR-TB
|
lineage4.1.1
|
None
|
ERR6866540
|
Sensitive
|
lineage2.2.1;lineage4.1.1
|
None
|
ERR4813590
|
HR-TB
|
lineage4.1.1
|
None
|
ERR6865858
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4178209
|
Other
|
lineage4.1.1
|
None
|
ERR4812557
|
Other
|
lineage4.1.1
|
None
|
ERR6865392
|
Sensitive
|
lineage4.1.1
|
None
|
SRR13870419
|
XDR-TB
|
lineage4.1.1
|
None
|
ERR4178119
|
Other
|
lineage4.1.1
|
None
|
ERR2516693
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
SRR18911001
|
Sensitive
|
lineage4.1.1
|
None
|
ERR13260416
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4812370
|
Other
|
lineage4.1.1
|
None
|
ERR6866045
|
Other
|
lineage4.1.1
|
None
|
ERR6866325
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866428
|
HR-TB
|
lineage4.1.1
|
None
|
ERR6866541
|
Sensitive
|
lineage4.1.1
|
None
|
SRR10808929
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28394220
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4024916
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4024530
|
Other
|
lineage4.1.1
|
None
|
SRR28393706
|
Other
|
lineage4.1.1
|
None
|
SRR22528556
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4178157
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813673
|
HR-TB
|
lineage4.1.1
|
None
|
ERR13260644
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6866329
|
Sensitive
|
lineage4.1.1
|
None
|
SRR10808584
|
HR-TB
|
lineage4.1.1
|
None
|
ERR13260116
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR6866069
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866142
|
Sensitive
|
lineage4.1.1
|
None
|
SRR16370494
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4195320
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4811716
|
HR-TB
|
lineage4.1.1
|
pe
|
ERR4813514
|
Sensitive
|
lineage4.1.1
|
None
|
ERR3287660
|
HR-TB
|
lineage4.1.1
|
pe
|
SRR26112614
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812984
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR2184647
|
Other
|
lineage2.2.1;lineage4.1.1
|
None
|
SRR26112822
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4811815
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812004
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR775308
|
HR-TB
|
lineage4.1.1;lineage4.3.3
|
pe
|
ERR4812350
|
Sensitive
|
lineage4.1.1
|
pe
|
SRR10808440
|
HR-TB
|
lineage4.1.1
|
None
|
ERR2184213
|
Other
|
lineage4.1.1
|
pe
|
ERR4813127
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6866852
|
Other
|
lineage4.1.1
|
None
|
ERR4024794
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4178210
|
Sensitive
|
lineage4.1.1
|
None
|
SRR19241765
|
Sensitive
|
lineage4.1.1
|
None
|
SRR6046351
|
Other
|
lineage4.1.1
|
gb
|
SRR28859796
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4025138
|
Other
|
lineage4.1.1
|
None
|
ERR4178208
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812139
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4812192
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4812219
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4812982
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR2184306
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR4813233
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR7910848
|
HR-TB
|
lineage4.1.1
|
None
|
ERR7910999
|
RR-TB
|
lineage4.1.1
|
pe
|
ERR2184444
|
Sensitive
|
lineage4.1.1
|
pe
|
SRR13870383
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR4812965
|
HR-TB
|
lineage4.1.1
|
pe
|
SRR22528561
|
Sensitive
|
lineage4.1.1;lineage4.3.2
|
None
|
SRR3724983
|
Other
|
lineage4.1.1
|
pe
|
SRR26112644
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6865667
|
Other
|
lineage4.1.1
|
None
|
SRR18911004
|
Sensitive
|
lineage4.1.1
|
None
|
ERR13267433
|
HR-TB
|
lineage4.1.1
|
None
|
SRR28393998
|
HR-TB
|
lineage4.1.1
|
None
|
SRR21661636
|
Sensitive
|
lineage4.1.1
|
None
|
SRR21662768
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2184481
|
Sensitive
|
lineage4.1.1
|
pe
|
SRR28858444
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4813084
|
HR-TB
|
lineage4.1.1
|
pe
|
SRR28860175
|
Sensitive
|
lineage4.1.1
|
None
|
ERR779904
|
MDR-TB
|
lineage4.1.1;lineage4.1.2.1
|
pe
|
ERR7910877
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR7911340
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
SRR29052873
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4025114
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2184403
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4813318
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4813081
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR18911873
|
Other
|
lineage4.1.1
|
None
|
ERR13260649
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4024588
|
Other
|
lineage4.1.1
|
None
|
ERR13261598
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR6865924
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866567
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812588
|
Other
|
lineage4.1.1
|
pe
|
ERR4829240
|
HR-TB
|
lineage4.1.1
|
None
|
SRR3725704
|
Sensitive
|
lineage4.1.1
|
None
|
ERR751410
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR2516547
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR4811741
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4812510
|
Sensitive
|
lineage4.1.1;lineage4.3.3
|
pe
|
SRR22528527
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4024879
|
HR-TB
|
lineage4.1.1
|
None
|
ERR6865889
|
Other
|
lineage4.1.1
|
None
|
SRR21710933
|
Sensitive
|
lineage4.1.1
|
None
|
SRR10808566
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813330
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR4024518
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866507
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2184617
|
Sensitive
|
lineage4.1.1
|
None
|
SRR10808958
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866265
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6865666
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866196
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813472
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
SRR28394069
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4813021
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR22528522
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR6866016
|
Other
|
lineage4.1.1
|
None
|
ERR3287739
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR4025026
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812900
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR6866632
|
Other
|
lineage4.1.1
|
None
|
ERR6866903
|
Sensitive
|
lineage4.1.1
|
None
|
SRR22461582
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR28393310
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR28394050
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR28394261
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR28394204
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR28393837
|
Other
|
lineage4.1.1
|
None
|
SRR28394166
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR6866264
|
Sensitive
|
lineage4.1.1
|
None
|
ERR7910847
|
HR-TB
|
lineage4.1.1
|
None
|
ERR2510203
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR13870369
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6866521
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866081
|
Other
|
lineage4.1.1
|
None
|
SRR19325547
|
RR-TB
|
lineage4.1.1
|
None
|
ERR4024648
|
Sensitive
|
lineage4.1.1
|
None
|
SRR19318144
|
RR-TB
|
lineage4.1.1
|
None
|
ERR4024973
|
Sensitive
|
lineage4.1.1
|
None
|
SRR29690797
|
Sensitive
|
lineage4.1.1
|
None
|
SRR22536488
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6865760
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28393368
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR12117914
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR3287652
|
HR-TB
|
lineage4.1.1
|
pe
|
ERR4812562
|
Other
|
lineage4.1.1
|
pe
|
ERR4812879
|
HR-TB
|
lineage4.1.1
|
None
|
ERR4812974
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR4813308
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR21675703
|
Other
|
lineage4.1.1
|
None
|
SRR10808932
|
Other
|
lineage4.1.1
|
None
|
ERR4812489
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4811783
|
HR-TB
|
lineage4.1.1
|
pe
|
SRR16915709
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813361
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
SRR26112474
|
RR-TB
|
lineage4.1.1
|
None
|
ERR4813232
|
Other
|
lineage4.1.1
|
pe
|
SRR16089672
|
Sensitive
|
lineage4.1.1
|
None
|
SRR3732575
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2516703
|
MDR-TB
|
lineage4.1.1
|
nl
|
ERR6866804
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2510181
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR6865581
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6865746
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813140
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR4813454
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR4813384
|
MDR-TB
|
lineage4.1.1;lineage4.3.3
|
pe
|
ERR7910876
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR22461613
|
HR-TB
|
lineage4.1.1
|
None
|
ERR4812584
|
Other
|
lineage4.1.1
|
pe
|
SRR10808587
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28393580
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR28394032
|
Other
|
lineage4.1.1
|
None
|
SRR28393404
|
Sensitive
|
lineage4.1.1;lineage4.3.3
|
None
|
SRR28860147
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28394003
|
HR-TB
|
lineage4.1.1
|
None
|
SRR22461622
|
HR-TB
|
lineage4.1.1
|
None
|
ERR1034709
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR13291980
|
Other
|
lineage4.1.1
|
None
|
SRR21663276
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4811897
|
Other
|
lineage4.1.1
|
pe
|
SRR28381190
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4829494
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4813147
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR6866946
|
Sensitive
|
lineage4.1.1
|
None
|
SRR26112278
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866089
|
Sensitive
|
lineage4.1.1
|
None
|
SRR10808814
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR751451
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
ERR779899
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR12117902
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
SRR21722109
|
Sensitive
|
lineage4.1.1
|
None
|
ERR7910991
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4972560
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR13260701
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR13261609
|
HR-TB
|
lineage4.1.1
|
None
|
ERR6865489
|
Other
|
lineage4.1.1
|
None
|
SRR28860191
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4025021
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812009
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR4812803
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4813051
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4024515
|
Other
|
lineage4.1.1
|
None
|
SRR21727717
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812340
|
Other
|
lineage4.1.1
|
pe
|
SRR10808665
|
Other
|
lineage4.1.1
|
None
|
ERR3287769
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR6866956
|
Sensitive
|
lineage4.1.1
|
None
|
SRR10808529
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2184428
|
Sensitive
|
lineage4.1.1
|
pe
|
ERR6866455
|
Sensitive
|
lineage4.1.1
|
None
|
ERR2516532
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR3287315
|
Other
|
lineage4.1.1
|
pe
|
ERR751379
|
HR-TB
|
lineage4.1.1
|
pe
|
ERR4813491
|
Sensitive
|
lineage4.1.1
|
None
|
ERR6866953
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4813120
|
Pre-XDR-TB
|
lineage4.1.1;lineage4.3.2
|
None
|
ERR4812280
|
Sensitive
|
lineage4.1.1
|
None
|
ERR13260667
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR4812072
|
Sensitive
|
lineage4.1.1
|
pe
|
SRR28859990
|
Sensitive
|
lineage4.1.1
|
None
|
SRR28860188
|
Sensitive
|
lineage4.1.1
|
None
|
ERR4812214
|
Other
|
lineage4.1.1
|
pe
|
SRR28393416
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR28394127
|
Sensitive
|
lineage4.1.1;lineage4.3.4
|
None
|
SRR7131158
|
HR-TB
|
lineage4.1.1
|
None
|
SRR28394217
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|