Rv0006 - c.-50G>C


Drug resistance types
1 Sensitive 1 RR-TB 20 HR-TB 12 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 27 Other
lineage Counts
lineage Count
2
lineage4.1.1.1 1
lineage2.1;lineage4.9;lineage6.3 5
lineage2.1;lineage4.9 6
lineage2.2.1.1 2
M.canetti;lineage4.2 1
La3;M.canetti;lineage2.1;lineage4.9 6
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage4.9;lineage7 2
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage6.3 1
La3;lineage4.3.4 1
lineage4.1.3 2
M.canetti;lineage2.1;lineage4.9 2
lineage2.1 1
lineage4.9;lineage6.3 2
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.9 4
M.canetti;lineage4.9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;M.canetti;lineage3.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 62
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675236 Other None
ERR176793 Other lineage4.1.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1184381 MDR-TB None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR1167384 Other La3;lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1063846 HR-TB lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1172817 Other La3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR387051 Other lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None