Rv0006 - c.121C>T


Drug resistance types
7 Sensitive 0 RR-TB 10 HR-TB 7 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 11 Other
lineage Counts
lineage Count
lineage4.9 8
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7;lineage4.9;lineage7 3
La1.7;M.canetti;lineage4.9 2
lineage4.9;lineage9 2
La2 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.7;lineage4.9 2
lineage4.3.2;lineage4.9 1
lineage3.1.2.2 1
M.canetti;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage2.2.1 1
La1.7;lineage3;lineage4.9;lineage7 1
1
lineage4.9;lineage6.3 1
La1.7;lineage4.9;lineage6 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 35
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6044838 Other lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR161037 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR1462574 Sensitive La2 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR1462575 Sensitive La2 None
SRR1172310 HR-TB lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR10305659 Sensitive lineage2.2.1 None
SRR1183111 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR987722 MDR-TB None
SRR1180226 HR-TB lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR5341373 Other lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None