Rv0006 - c.549C>G


Drug resistance types
13 Sensitive 4 RR-TB 5 HR-TB 15 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 13 Other
lineage Counts
lineage Count
lineage4.9 5
La1.7;lineage4.9 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage4.6.4;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.3 16
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2 1
1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage3 1
lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.8 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 50
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR971389 Other lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4822263 Other lineage4.3.3 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR11049650 Sensitive lineage4.3.3 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR212001 HR-TB None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4814700 Other lineage4.3.3 None
ERR4816031 Other lineage4.3.3 gb
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11043543 Sensitive lineage4.3.3 None
SRR3085328 Sensitive lineage4.3.3 None
ERR11043866 Sensitive lineage4.3.3 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR3082069 Sensitive lineage4.3.3 None
ERR3275547 Sensitive lineage4.3.3 nl
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR2101296 Sensitive lineage4.3.3 None
ERR2446254 Sensitive lineage4.3.3 nl
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR4814379 Sensitive lineage3 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4188247 HR-TB lineage4.9 None
ERR4820363 Other lineage4.3.3 gb
ERR11082928 Sensitive lineage4.3.3 None
ERR4816151 Other lineage4.8 None
ERR4795890 Sensitive lineage4.3.3 None
ERR2517144 Sensitive lineage4.3.3 nl
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR5979515 Sensitive lineage4.3.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None