Rv0407 - c.531C>T
Drug resistance types
19 Sensitive
0 RR-TB
7 HR-TB
0 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| 4 | |
| lineage4 | 1 |
| lineage4.9 | 36 |
| lineage3 | 1 |
| lineage1.1.3.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.1;lineage4.9 | 2 |
| lineage2.2.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1063896 | Sensitive | None | SRR6045053 | Other | lineage4 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR4800341 | Other | lineage3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR373947 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR9787197 | Other | None | ERR926156 | Sensitive | lineage4.9 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR9786604 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR6046046 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR9786671 | Other | None | SRR6046878 | Other | lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR2446566 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | ERR736872 | HR-TB | lineage4.9 | None |
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