Rv1630 - c.-27_-24delCAACinsAAA

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
0 Sensitive 2 RR-TB 39 HR-TB 15 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 15 Other
lineage Counts
lineage Count
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
lineage2.1;lineage4.9 4
La3;M.canetti;lineage2.1;lineage4.9 9
lineage2.2.1 2
M.canetti;lineage2.1;lineage4.9 11
9
lineage4.1.3 2
lineage4.9 4
lineage4.1.1;lineage4.9 1
lineage2.1;lineage6.3 1
M.canetti;lineage2.1 1
lineage4.9;lineage6.3 2
M.canetti;lineage2.2 3
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.1;lineage4.9;lineage6.3 2
lineage2.2.1.2 1
La3;M.canetti;lineage2.2.1 1
La3;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;lineage4.9 1
M.canetti;lineage4.9 1
lineage4.1.1.1 2
lineage2.2 1
lineage2.1 1
M.canetti;lineage2.1;lineage6.3 1
La1.7;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 76
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4810624 HR-TB lineage2.2.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4810741 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR4811142 RR-TB None
ERR4811075 Other None
ERR4811311 Other None
SRR28119753 Other lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR12416824 HR-TB None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR28119811 Other lineage2.2.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827682 Other None
ERR212001 HR-TB None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.2.1.2 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR387051 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR26399973 Other La3;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4811105 HR-TB None
ERR8976043 HR-TB lineage2.2 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB lineage2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR6325447 HR-TB lineage4.1.1.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None