lineage | Count |
---|---|
lineage2.2.2 | 1 |
lineage4.9 | 22 |
lineage2.2.1 | 5 |
lineage4.8 | 2 |
La1.2.BCG | 3 |
lineage4.3.2.1 | 2 |
lineage4.3.4.2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.1.2.1 | 1 |
lineage1.2.2.2 | 1 |
La1.2.BCG;lineage4.9 | 1 |
lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 41 |
ID | Drug resistance | Lineage | Country iso2 | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR369151 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | SRR1915487 | Other | La1.2.BCG | None | ERR926155 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9634265 | Sensitive | lineage4.3.4.2 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR1915479 | Other | La1.2.BCG | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None |
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