Rv1854c - c.654G>C
Drug resistance types
13 Sensitive
0 RR-TB
20 HR-TB
3 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| 33 | |
| lineage2.2.1 | 4 |
| lineage2.2 | 2 |
| lineage4.2.1 | 1 |
| lineage4.9 | 2 |
| lineage1.1.2 | 1 |
| lineage4.8 | 9 |
| lineage3 | 3 |
| lineage4.1.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 60 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6325448 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325444 | HR-TB | None | SRR998860 | MDR-TB | lineage2.2.1 | None | SRR6256983 | MDR-TB | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6785157 | Sensitive | lineage4.2.1 | None | ERR4831117 | HR-TB | None | ERR3797024 | Other | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR1034652 | Other | None | ERR3283032 | HR-TB | None | ERR4407463 | HR-TB | None | ERR3797061 | Other | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | SRR11972333 | Sensitive | lineage1.1.2 | None | SRR15368973 | Other | None | SRR18213691 | Other | lineage4.8 | None | SRR19304036 | HR-TB | None | SRR18213738 | Other | lineage3 | None | ERR4814437 | Other | lineage4.1.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4814834 | Other | lineage3 | None | ERR181744 | HR-TB | None | SRR3675234 | Other | None | ERR2229078 | Sensitive | lineage4.8 | None | ERR2229555 | HR-TB | lineage4.8 | None | ERR2229374 | Sensitive | lineage4.8 | None | ERR212123 | Other | None | ERR2229237 | Sensitive | lineage4.8 | None | ERR2229137 | Sensitive | lineage4.8 | None | SRR3675574 | HR-TB | None | ERR2229406 | Other | lineage4.8 | None | ERR2229387 | Sensitive | lineage4.8 | None | SRR6044790 | HR-TB | None | ERR2513642 | Sensitive | lineage4.1.1 | None | ERR2693231 | Other | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | ERR2228906 | Sensitive | lineage4.8 | None | ERR2245334 | Sensitive | lineage3.1.1 | None | ERR2514125 | Other | lineage3 | None | ERR4819786 | Sensitive | lineage2.2.1 | None | ERR4821823 | Sensitive | lineage1.2.1.2.1 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6046362 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None |
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