Rv2043c - c.338_346delGCACGCCAC
Drug resistance types
96 Sensitive
2 RR-TB
4 HR-TB
2 MDR-TB
39 Pre-XDR-TB
1 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 71 |
| lineage4.4.1.1 | 13 |
| lineage4.3.2.1 | 14 |
| lineage4.3.3 | 4 |
| lineage4.1 | 1 |
| lineage4.1.2 | 9 |
| lineage3.1.1;lineage4.8.1 | 2 |
| lineage4.3.2 | 4 |
| lineage4.1.2.1 | 5 |
| lineage4.3.4.1 | 1 |
| lineage4.1.1.1 | 4 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1.1 | 4 |
| lineage4.4.1.1.1 | 3 |
| lineage3 | 2 |
| lineage1.2.2.1 | 2 |
| lineage4.8 | 3 |
| lineage4.1.1.2 | 2 |
| lineage4.1.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 152 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10869104 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982019 | Sensitive | lineage2.2.1 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | ERR2515341 | Sensitive | lineage4.3.2.1 | za | ERR10748550 | XDR-TB | lineage2.2.1 | None | SRR2101804 | Sensitive | lineage4.3.2.1 | None | SRR6982023 | Sensitive | lineage4.3.3 | None | ERR2515579 | Sensitive | lineage2.2.1 | za | SRR2101797 | Sensitive | lineage2.2.1 | None | ERR2515324 | Sensitive | lineage2.2.1 | za | SRR6982556 | Sensitive | lineage4.1 | None | ERR9120089 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120090 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987386 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748104 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101309 | HR-TB | lineage2.2.1 | None | ERR1873394 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748517 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR2101815 | Sensitive | lineage4.4.1.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR2101708 | RR-TB | lineage2.2.1 | None | ERR2515145 | Sensitive | lineage4.1.2 | za | SRR6982021 | Sensitive | lineage4.3.2.1 | None | SRR2101760 | Sensitive | lineage2.2.1 | None | SRR6855681 | Sensitive | lineage3.1.1;lineage4.8.1 | None | ERR7911582 | Pre-XDR-TB | lineage2.2.1 | za | ERR2515979 | Sensitive | lineage4.3.3 | za | SRR6982476 | Sensitive | lineage4.3.2.1 | None | SRR6982145 | RR-TB | lineage2.2.1 | None | ERR9806904 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | ERR2515355 | Other | lineage4.1.2 | za | SRR6855886 | Sensitive | lineage2.2.1 | None | SRR2101753 | HR-TB | lineage4.3.2 | None | SRR29055823 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982144 | Other | lineage2.2.1 | None | ERR2515910 | Pre-XDR-TB | lineage2.2.1 | za | SRR6856116 | Sensitive | lineage4.3.2.1 | None | SRR6982434 | HR-TB | lineage4.3.2 | None | SRR6896185 | Sensitive | lineage4.1.2.1 | None | SRR6982150 | Sensitive | lineage4.1.2 | None | SRR6982244 | Sensitive | lineage4.1.2.1 | None | ERR5987459 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515693 | Sensitive | lineage4.1.2.1 | None | SRR6982024 | Sensitive | lineage4.4.1.1 | None | SRR6982147 | Sensitive | lineage2.2.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | ERR5987245 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101736 | Sensitive | lineage4.1.1.1 | None | SRR6982485 | Sensitive | lineage4.1.1.3 | None | ERR2515942 | Sensitive | lineage2.2.1.1 | za | SRR6982159 | Sensitive | lineage4.3.2.1 | None | ERR5987381 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748124 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982425 | Other | lineage4.1.1.3 | None | ERR9119871 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855678 | Sensitive | lineage4.1.2.1 | None | ERR9806882 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982372 | Sensitive | lineage4.4.1.1 | None | ERR1873535 | Pre-XDR-TB | lineage2.2.1 | za | SRR6982420 | Sensitive | lineage4.3.2.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR6856002 | Sensitive | lineage4.3.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | ERR2515431 | Sensitive | lineage2.2.1 | za | SRR6855961 | Sensitive | lineage2.2.1.1 | None | SRR6856082 | Sensitive | lineage4.3.2 | None | SRR29093758 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119773 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515167 | Sensitive | lineage4.4.1.1 | za | SRR6981969 | Sensitive | lineage4.4.1.1.1 | None | SRR6982152 | Sensitive | lineage2.2.1 | None | ERR9119723 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR6982504 | Sensitive | lineage4.4.1.1.1 | None | ERR10748139 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982377 | Sensitive | lineage4.1.1.1 | None | SRR2101759 | Other | lineage4.1.2.1 | None | SRR6855752 | Sensitive | lineage2.2.1 | None | SRR2101810 | Other | lineage3 | None | ERR10748435 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515873 | Sensitive | lineage2.2.1 | za | SRR29093700 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025602 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806957 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855955 | Sensitive | lineage1.2.2.1 | None | SRR2101716 | Sensitive | lineage2.2.1.1 | None | ERR2515330 | Sensitive | lineage2.2.1 | za | ERR2515921 | Sensitive | lineage4.8 | za | SRR6982421 | Sensitive | lineage4.4.1.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | ERR1873464 | Pre-XDR-TB | lineage2.2.1 | za | ERR2515495 | Sensitive | lineage2.2.1 | za | SRR6855720 | Sensitive | lineage4.4.1.1 | None | ERR8025445 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515174 | Sensitive | lineage2.2.1 | None | SRR2101765 | Sensitive | lineage4.1.1.2 | None | ERR2515930 | Sensitive | lineage2.2.1 | za | ERR2516092 | Sensitive | lineage4.1.1 | za | ERR7911689 | Pre-XDR-TB | lineage2.2.1 | za | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR6856076 | Sensitive | lineage4.1.2 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR2101770 | Sensitive | lineage4.4.1.1.1 | None | SRR2101813 | Other | lineage4.1.1.3 | None | SRR6856034 | Sensitive | lineage4.1.2 | None | SRR6856018 | Sensitive | lineage4.1.1 | None | SRR6896347 | HR-TB | lineage2.2.1 | None | ERR9807008 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855761 | Sensitive | lineage4.8 | None | SRR6982001 | Sensitive | lineage2.2.1.1 | None | SRR6982055 | Sensitive | lineage2.2.1 | None | SRR6982359 | Sensitive | lineage4.1.1.1 | None | ERR2515192 | Sensitive | lineage3.1.1;lineage4.8.1 | za | SRR2101799 | Sensitive | lineage4.3.2.1 | None | SRR2101700 | Sensitive | lineage4.1.1.1 | None | SRR6855702 | Sensitive | lineage2.2.1 | None | ERR2515875 | Sensitive | lineage4.3.2.1 | za | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR6855987 | Sensitive | lineage2.2.1 | None | ERR2515557 | Sensitive | lineage1.2.2.1 | za | SRR29096470 | Pre-XDR-TB | lineage2.2.1 | None | SRR6856086 | Sensitive | lineage2.2.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | ERR10748334 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748408 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911700 | Pre-XDR-TB | lineage2.2.1 | za | ERR2516059 | Sensitive | lineage4.3.2.1 | za | ERR8025639 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855805 | Sensitive | lineage2.2.1 | None | ERR5987444 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855696 | Other | lineage4.1.2 | None | SRR6982497 | Sensitive | lineage4.3.2.1 | None | SRR2101728 | Sensitive | lineage4.3.2.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR10869270 | Pre-XDR-TB | lineage2.2.1 | None | SRR6981959 | Sensitive | lineage4.8 | None | ERR2515959 | Sensitive | lineage4.4.1.1 | za | SRR6982160 | Sensitive | lineage4.1.1.2 | None | SRR6982484 | Other | lineage3.1.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6855932 | Sensitive | lineage4.3.2.1 | None | ERR2515941 | Sensitive | lineage4.3.2 | za | ERR5758353 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855839 | Sensitive | lineage2.2.1 | None | SRR2101800 | Sensitive | lineage4.4.1.1 | None | SRR6982177 | Sensitive | lineage3 | None | ERR7911583 | Pre-XDR-TB | lineage2.2.1 | za | SRR6855700 | Sensitive | lineage2.2.1 | None | ERR2515762 | Sensitive | lineage4.1.2 | za | SRR6855806 | Sensitive | lineage4.4.1.1 | None |
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