Rv2043c - c.338_346delGCACGCCAC


Drug resistance types
87 Sensitive 1 RR-TB 4 HR-TB 2 MDR-TB 33 Pre-XDR-TB 1 XDR-TB 12 Other
lineage Counts
lineage Count
lineage2.2.1 64
lineage4.1.2.1 5
lineage3 2
lineage4.7 1
lineage4.3.2.1 14
lineage4.1.2 9
lineage4.4.1.1 12
lineage4.1.1.3 3
lineage4.3.2 3
lineage3.1.1;lineage4.8.1 2
lineage4.3.3 3
lineage4.1.1.1 4
lineage4.8 3
lineage4.1.1 2
lineage1.2.2.1 2
lineage2.2.1.1 4
lineage4.1.1.2 1
lineage3.1.1 1
lineage4.4.1.1.1 3
lineage4.3.4.1 1
lineage4.1 1
spoligotype Counts
spoligotype Count
None 140
Geographic prevalence
Country level data for this variant is available for 29 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6896347 HR-TB lineage2.2.1 None
SRR2101759 Other lineage4.1.2.1 None
SRR6855752 Sensitive lineage2.2.1 None
ERR9120089 Pre-XDR-TB lineage2.2.1 None
SRR6982147 Sensitive lineage2.2.1 None
SRR2101810 Other lineage3 None
SRR6981975 Sensitive lineage4.7 None
SRR6855932 Sensitive lineage4.3.2.1 None
ERR5758353 Pre-XDR-TB lineage2.2.1 None
SRR6855886 Sensitive lineage2.2.1 None
ERR2516059 Sensitive lineage4.3.2.1 za
ERR5987459 Pre-XDR-TB lineage2.2.1 None
ERR2515762 Sensitive lineage4.1.2 za
ERR10748435 Pre-XDR-TB lineage2.2.1 None
ERR9806957 Pre-XDR-TB lineage2.2.1 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982055 Sensitive lineage2.2.1 None
ERR7911700 Pre-XDR-TB lineage2.2.1 za
SRR6982425 Other lineage4.1.1.3 None
SRR6981968 Sensitive lineage4.1.2 None
ERR2515941 Sensitive lineage4.3.2 za
SRR6855678 Sensitive lineage4.1.2.1 None
ERR5987444 Pre-XDR-TB lineage2.2.1 None
SRR6855987 Sensitive lineage2.2.1 None
ERR10748104 Pre-XDR-TB lineage2.2.1 None
SRR6982372 Sensitive lineage4.4.1.1 None
SRR2101309 HR-TB lineage2.2.1 None
SRR6856086 Sensitive lineage2.2.1 None
SRR6856002 Sensitive lineage4.3.2.1 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR2101815 Sensitive lineage4.4.1.1 None
SRR6855805 Sensitive lineage2.2.1 None
ERR5987245 Pre-XDR-TB lineage2.2.1 None
ERR2515930 Sensitive lineage2.2.1 za
SRR6855681 Sensitive lineage3.1.1;lineage4.8.1 None
ERR9807008 Pre-XDR-TB lineage2.2.1 None
SRR2101803 Sensitive lineage4.3.3 None
SRR6982177 Other lineage3 None
SRR2101813 Other lineage4.1.1.3 None
SRR2101728 Sensitive lineage4.3.2.1 None
SRR6982377 Sensitive lineage4.1.1.1 None
SRR6981959 Sensitive lineage4.8 None
SRR6855700 Sensitive lineage2.2.1 None
ERR7911689 Pre-XDR-TB lineage2.2.1 za
SRR6982019 Sensitive lineage2.2.1 None
SRR6982159 Sensitive lineage4.3.2.1 None
SRR6856018 Sensitive lineage4.1.1 None
SRR6855955 Sensitive lineage1.2.2.1 None
ERR9120090 Pre-XDR-TB lineage2.2.1 None
SRR6856034 Sensitive lineage4.1.2 None
ERR10748408 Pre-XDR-TB lineage2.2.1 None
ERR7911583 Pre-XDR-TB lineage2.2.1 za
ERR2515959 Sensitive lineage4.4.1.1 za
ERR7911582 Pre-XDR-TB lineage2.2.1 za
SRR6856116 Sensitive lineage4.3.2.1 None
ERR2515495 Sensitive lineage2.2.1 za
SRR6982023 Sensitive lineage4.3.3 None
SRR2101736 Sensitive lineage4.1.1.1 None
ERR2516092 Sensitive lineage4.1.1 za
SRR2101716 Sensitive lineage2.2.1.1 None
ERR2515192 Sensitive lineage3.1.1;lineage4.8.1 za
SRR2101804 Sensitive lineage4.3.2.1 None
SRR6982497 Sensitive lineage4.3.2.1 None
SRR6982476 Sensitive lineage4.3.2.1 None
SRR2101700 Sensitive lineage4.1.1.1 None
SRR6855702 Sensitive lineage2.2.1 None
ERR2515174 Sensitive lineage2.2.1 None
ERR8025445 Pre-XDR-TB lineage2.2.1 None
SRR6855720 Sensitive lineage4.4.1.1 None
ERR1873394 Pre-XDR-TB lineage2.2.1 None
SRR6982420 Sensitive lineage4.3.2.1 None
ERR10748517 Pre-XDR-TB lineage2.2.1 None
SRR6982244 Other lineage4.1.2.1 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR6855961 Sensitive lineage2.2.1.1 None
SRR6982485 Sensitive lineage4.1.1.3 None
ERR2515330 Sensitive lineage2.2.1 za
SRR2101708 RR-TB lineage2.2.1 None
ERR1873464 Pre-XDR-TB lineage2.2.1 za
ERR2515145 Sensitive lineage4.1.2 za
SRR6982001 Sensitive lineage2.2.1.1 None
SRR6982021 Sensitive lineage4.3.2.1 None
SRR2101760 Sensitive lineage2.2.1 None
ERR9119723 Pre-XDR-TB lineage2.2.1 None
SRR6855696 Other lineage4.1.2 None
SRR2101765 Sensitive lineage4.1.1.2 None
SRR6981977 Sensitive lineage2.2.1 None
SRR6982434 HR-TB lineage4.3.2 None
SRR2101802 Sensitive lineage4.4.1.1 None
ERR2515979 Sensitive lineage4.3.3 za
ERR9119773 Pre-XDR-TB lineage2.2.1 None
ERR1873535 Pre-XDR-TB lineage2.2.1 za
ERR2515355 Other lineage4.1.2 za
SRR6982484 Other lineage3.1.1 None
SRR6982152 Sensitive lineage2.2.1 None
ERR10748550 XDR-TB lineage2.2.1 None
SRR2101774 Sensitive lineage2.2.1 None
ERR2515324 Sensitive lineage2.2.1 za
ERR2515873 Sensitive lineage2.2.1 za
SRR2101770 Sensitive lineage4.4.1.1.1 None
ERR10748124 Pre-XDR-TB lineage2.2.1 None
ERR10748139 Pre-XDR-TB lineage2.2.1 None
SRR6982150 Sensitive lineage4.1.2 None
SRR2101753 HR-TB lineage4.3.2 None
ERR2515341 Sensitive lineage4.3.2.1 za
SRR6982359 Sensitive lineage4.1.1.1 None
ERR8025602 Pre-XDR-TB lineage2.2.1 None
SRR6982050 Other lineage4.3.4.1 None
SRR6855761 Sensitive lineage4.8 None
SRR6982024 Sensitive lineage4.4.1.1 None
ERR2515579 Sensitive lineage2.2.1 za
ERR5987381 Pre-XDR-TB lineage2.2.1 None
SRR2101799 Sensitive lineage4.3.2.1 None
SRR2101797 Sensitive lineage2.2.1 None
SRR2101786 Sensitive lineage4.4.1.1 None
ERR9119871 Pre-XDR-TB lineage2.2.1 None
SRR6855839 Sensitive lineage2.2.1 None
ERR2515875 Sensitive lineage4.3.2.1 za
SRR6855806 Sensitive lineage4.4.1.1 None
ERR2515167 Sensitive lineage4.4.1.1 za
SRR6981969 Sensitive lineage4.4.1.1.1 None
ERR2515942 Sensitive lineage2.2.1.1 za
ERR2515557 Sensitive lineage1.2.2.1 za
SRR6982421 Sensitive lineage4.4.1.1 None
SRR6856076 Sensitive lineage4.1.2 None
SRR2101693 Sensitive lineage4.1.2 None
SRR6982144 Other lineage2.2.1 None
ERR2515431 Sensitive lineage2.2.1 za
ERR2515921 Sensitive lineage4.8 za
SRR6982504 Sensitive lineage4.4.1.1.1 None
ERR10748334 Pre-XDR-TB lineage2.2.1 None
SRR6982022 Sensitive lineage4.4.1.1 None
ERR5987386 Pre-XDR-TB lineage2.2.1 None
SRR6982556 Other lineage4.1 None
SRR6896185 Sensitive lineage4.1.2.1 None
ERR2515910 Pre-XDR-TB lineage2.2.1 za
SRR10869104 Pre-XDR-TB lineage2.2.1 None
ERR9806882 Pre-XDR-TB lineage2.2.1 None
ERR2515693 Sensitive lineage4.1.2.1 None
SRR10869270 Pre-XDR-TB lineage2.2.1 None