Rv3547 - c.-177_-175delCTCinsACG
Drug resistance types
10 Sensitive
2 RR-TB
11 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 1 |
| lineage4.9 | 20 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La2;lineage2.2 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.3.2.1 | 1 |
| La3;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La2;lineage4.9 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage2.2 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 39 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
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