Rv3596c - c.441C>T
Drug resistance types
18 Sensitive
6 RR-TB
26 HR-TB
15 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 24 |
| lineage4.9 | 4 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| 1 | |
| M.canetti;lineage2.1;lineage4.9 | 12 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.2.1 | 4 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 4 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage1.1.2;lineage4 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.4.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage2.2 | 1 |
| lineage1.1 | 1 |
| lineage4.1.1.3 | 1 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| lineage4.1.2.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.5 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage4.1.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 82 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513361 | Sensitive | lineage3 | gb | ERR2514279 | Sensitive | lineage3 | gb | ERR2514779 | Sensitive | lineage3 | gb | SRR3675243 | Other | lineage4.9 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR1640750 | Other | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR7069314 | Other | lineage3 | None | SRR6797470 | Sensitive | lineage3 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5073802 | Sensitive | lineage2.2.1 | vn | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR7069898 | Sensitive | lineage3 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | SRR16089842 | Other | lineage3 | None | SRR18213965 | Sensitive | lineage3 | None | ERR386968 | Sensitive | lineage3 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR11082409 | HR-TB | lineage3 | None | ERR13291461 | Sensitive | lineage3 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR4817692 | HR-TB | lineage1.1.2;lineage4 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6044835 | Other | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4815658 | Sensitive | lineage3 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR28046232 | HR-TB | lineage3 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR2100697 | Sensitive | lineage3 | None | SRR2100980 | Sensitive | lineage3 | None | SRR2101190 | Sensitive | lineage3 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR351852 | Sensitive | lineage3 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11044539 | MDR-TB | lineage2.2.1 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | ERR2693228 | RR-TB | lineage4.9 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR3077978 | Other | lineage1.1 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4821053 | Other | lineage3 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR29230761 | Sensitive | lineage3 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR278609 | Sensitive | lineage3 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR2229143 | RR-TB | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR6325442 | HR-TB | lineage4.1.1;lineage4.9 | None | ERR9117698 | Sensitive | lineage3 | None | SRR6325447 | HR-TB | lineage4.1.1.1 | None | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR230072 | Sensitive | lineage3 | None | SRR6964612 | MDR-TB | lineage3 | None | SRR6964614 | MDR-TB | lineage3 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675487 | Other | M.canetti;lineage4.9 | None |
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