Rv3793 - c.1827G>C


Drug resistance types
0 Sensitive 4 RR-TB 33 HR-TB 21 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 28 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
La1.2 1
M.canetti;lineage2.1;lineage4.9 12
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.2.1 2
lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.9;lineage6.3 3
La1.7;lineage4.9 1
lineage2.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.1.3 2
lineage4.6.2.2 1
La1.2.BCG 1
3
M.canetti;lineage4.6.4;lineage4.9 2
La3;lineage2.1;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage6.3.1 1
M.canetti;lineage2.1;lineage4 1
La3;lineage2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.2.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.9 2
lineage2.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage2.2.1;lineage6.3 1
La1.7;lineage4.3.4.1 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.3.1;lineage4.9 1
La1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 86
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR23961549 Other La1.2 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
ERR4798262 HR-TB La1.2.BCG None
ERR9786843 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR20969677 HR-TB La3;lineage2 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675236 Other None
ERR3804169 HR-TB lineage4.1.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9787197 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR28119805 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None