lineage | Count |
---|---|
lineage4.5 | 1 |
lineage2.2.1 | 2 |
33 | |
lineage1.1.2 | 2 |
lineage2 | 2 |
lineage2.2.1;La3 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.9 | 5 |
La1 | 1 |
lineage3 | 1 |
lineage4.6.1.1 | 1 |
lineage4 | 2 |
spoligotype | Count |
---|---|
None | 55 |
ID | Drug resistance | Lineage | Country iso2 | SRR18213713 | HR-TB | lineage4.5 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR15368973 | Other | None | SRR25827682 | Other | None | SRR19303884 | HR-TB | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR3675465 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR3675501 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675222 | Other | None | ERR176610 | Sensitive | lineage4.3.4.2.1 | mw | ERR212039 | Sensitive | lineage4.3.4.2.1 | mw | ERR4830353 | Other | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR6046305 | Other | lineage4.9 | None | SRR5341333 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | ERR323043 | HR-TB | None | SRR6046540 | HR-TB | None | ERR502532 | HR-TB | None | ERR3797069 | Other | None | ERR3283010 | Other | La1 | None | ERR3283036 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR4811105 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4800341 | Other | lineage3 | None | ERR4811142 | MDR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR5336148 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736867 | HR-TB | None | ERR9117709 | HR-TB | None | SRR10809074 | Sensitive | lineage4 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | SRR1173153 | HR-TB | None | SRR1173629 | Other | None | SRR1184294 | HR-TB | None | SRR1175090 | Other | lineage4.9 | None | SRR1184380 | HR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None |
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