lineage | Count |
---|---|
La1 | 1 |
lineage3 | 1 |
67 | |
lineage3.1.2 | 1 |
lineage4.6.1.1 | 1 |
lineage4.6.2.2 | 2 |
lineage4.1.2.1 | 1 |
lineage2.2.1 | 1 |
lineage3.1 | 1 |
lineage2.2 | 2 |
lineage2 | 1 |
lineage4.1.2 | 1 |
lineage4 | 5 |
lineage4.9 | 2 |
lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 88 |
ID | Drug resistance | Lineage | Country iso2 | ERR4798262 | HR-TB | La1 | None | ERR4800341 | Other | lineage3 | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6359045 | HR-TB | None | ERR6358991 | HR-TB | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | ERR9786604 | Other | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787197 | Other | None | SRR1172310 | HR-TB | None | SRR1172817 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184380 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | None | SRR1196768 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | ERR158583 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR3675234 | Other | None | SRR4035721 | Other | lineage4.1.2 | None | SRR3675502 | Other | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | ERR2514692 | Other | None | SRR5341418 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | ERR2693230 | Other | None | ERR2693231 | Other | None | ERR2693257 | Other | None | SRR6044838 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6045327 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045155 | Sensitive | lineage4.3.3 | None | SRR6045399 | Other | None | SRR6046824 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046644 | HR-TB | None | SRR6325444 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294266 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR294248 | HR-TB | None | ERR502889 | Other | None | ERR067681 | HR-TB | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR3797014 | Other | None | ERR133986 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR1034652 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3797017 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None |
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