EBG00000313325 - n.1294T>C
Drug resistance types
46 Sensitive
5 RR-TB
11 HR-TB
14 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 24 |
| lineage4.2.1 | 2 |
| lineage4.1 | 2 |
| lineage2.2 | 4 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage2.2.2 | 3 |
| lineage4 | 2 |
| lineage2.2.1 | 17 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage1.2.2.2 | 3 |
| lineage3.1.2.1 | 3 |
| lineage3 | 10 |
| lineage4.6.1;lineage3.1.1 | 1 |
| 3 | |
| lineage3;lineage2.2 | 2 |
| lineage3.1.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.9;lineage4.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.6.3 | 1 |
| lineage4.3.3 | 1 |
| lineage4.8 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 97 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736825 | Sensitive | lineage4.9 | None | ERR5908226 | Sensitive | lineage4.2.1 | None | ERR736850 | Sensitive | lineage4.9 | None | SRR1002681 | HR-TB | lineage4.1 | None | ERR773804 | Sensitive | lineage4.9 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1013530 | HR-TB | lineage4.9 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1167264 | Pre-XDR-TB | lineage2.2 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1106670 | Other | lineage4.9 | None | SRR1165236 | Pre-XDR-TB | lineage2.2 | None | SRR1173174 | Pre-XDR-TB | lineage2.2.2 | None | SRR1172832 | Sensitive | lineage2.2.1 | None | SRR1172874 | Sensitive | lineage2.2.1 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1172798 | Sensitive | lineage2.2.1 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173773 | Sensitive | lineage2.2.1 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR1175025 | Sensitive | lineage2.2.1 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR1175107 | Sensitive | lineage2.2.1 | None | SRR1175108 | Other | lineage3.1.2 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR3105762 | HR-TB | None | SRR13591376 | Sensitive | lineage4.3.2 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR4814573 | Other | lineage1.1.3.2 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | SAMN02599073 | Sensitive | lineage2.2.1 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | SAMN02599089 | MDR-TB | lineage3 | None | SAMN02599052 | Sensitive | lineage2.2.1 | None | SAMN02403473 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034791 | RR-TB | None | SAMN02599072 | Sensitive | lineage2.2.1 | None | ERR4817817 | Sensitive | lineage3 | None | SRR5152904 | Other | lineage2.2.1 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | SRR5341346 | Sensitive | lineage3 | None | SRR6280286 | Sensitive | lineage2.2.1 | None | SAMN02599061 | MDR-TB | lineage3 | None | SRR6896576 | Other | lineage2.2.1 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | SRR6257038 | HR-TB | lineage4.1 | None | ERR4828749 | Sensitive | lineage2.2.1 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7131296 | Other | lineage4.3.3 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR7535053 | Sensitive | lineage3 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR7645856 | Sensitive | lineage4.4.1.1 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | ERR323057 | Sensitive | lineage4.9 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR473311 | Sensitive | lineage4.9 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR7646056 | Other | lineage4.2.1.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None |
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