EBG00000313325 - n.488G>T
Drug resistance types
33 Sensitive
7 RR-TB
11 HR-TB
13 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage4.2.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.9 | 17 |
| lineage3.1.2.1 | 1 |
| 3 | |
| lineage1.1.3.1 | 1 |
| lineage2.2 | 1 |
| lineage4.6.1.1 | 15 |
| lineage2.2.1 | 8 |
| lineage4.1.2.1 | 4 |
| lineage1.1.2 | 2 |
| lineage4.6.1.2 | 4 |
| lineage4.3.3 | 2 |
| lineage4.6 | 2 |
| lineage6.3.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.6.1 | 6 |
| lineage4 | 7 |
| lineage1.1.1 | 1 |
| lineage3 | 4 |
| lineage4.4.1.1 | 3 |
| lineage4.1.2 | 1 |
| lineage4.8 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage5.1.1 | 2 |
| lineage4.9;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR11972165 | MDR-TB | lineage2.2.1.1 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR3105762 | HR-TB | None | SRR11972166 | Sensitive | lineage1.1.3.1 | None | SRR11972169 | HR-TB | lineage2.2 | None | SRR11972164 | MDR-TB | lineage2.2.1.1 | None | SAMN02381005 | Other | lineage4.6.1.1 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR1199071 | HR-TB | lineage4.6.1.1 | ug | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR1199084 | Sensitive | lineage4.6.1.1 | ug | ERR4816429 | Other | lineage1.1.2 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | ERR2510831 | Other | lineage4.3.3 | None | ERR1199076 | Sensitive | lineage4.6.1.1 | None | ERR1199081 | Sensitive | lineage4.6.1.1 | None | ERR2510807 | Other | lineage4.6 | None | ERR1034791 | RR-TB | None | ERR1199087 | Sensitive | lineage4.6.1.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR1199080 | Sensitive | lineage4.6.1.1 | ug | ERR1199073 | Sensitive | lineage4.6.1.1 | ug | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR1199088 | Sensitive | lineage4.6.1.1 | ug | ERR4819784 | Other | lineage4.1.2.1 | None | ERR1193653 | Sensitive | lineage4.3.4.2.1 | ug | ERR1199077 | Sensitive | lineage4.6.1 | ug | ERR1199082 | Sensitive | lineage4.6.1.1 | None | SAMN02381047 | Sensitive | lineage4.6.1 | None | ERR1199062 | Sensitive | lineage4.6.1.1 | ug | SRR6044936 | Other | lineage4 | None | ERR4828415 | HR-TB | lineage1.1.1 | vn | SRR6046815 | Other | lineage3 | None | ERR4821879 | Other | lineage4.6.1.1 | None | SRR6046834 | Sensitive | lineage4.9 | None | SRR7131122 | Other | lineage2.2.1 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR7131048 | Other | lineage4.4.1.1 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR7535053 | Sensitive | lineage3 | None | SRR7131156 | Other | lineage4.6 | None | SRR7131160 | Sensitive | lineage3 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7131168 | Other | lineage4.1.2.1 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | ERR10796589 | Other | lineage4.9 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | ERR323057 | Sensitive | lineage4.9 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796627 | Other | lineage4 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796629 | Other | lineage4 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR405191 | Other | lineage4.9 | None | ERR10796630 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR5979787 | Other | lineage4.9 | None | ERR6197040 | Other | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | SRR1013530 | HR-TB | lineage4.9 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR846990 | Sensitive | lineage4.9 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR751338 | Other | lineage5.1.1 | None | SRR1049623 | MDR-TB | lineage4.4.1.1 | None | SRR1049743 | Sensitive | lineage4.6.1 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062895 | Other | lineage4.6.1.1 | None | SRR1062927 | MDR-TB | lineage4.6.1 | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR1166181 | MDR-TB | lineage4 | None |
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