EBG00000313325 - n.708C>T
Drug resistance types
40 Sensitive
2 RR-TB
6 HR-TB
3 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 18 |
| lineage4.9 | 30 |
| lineage4.1.1.3 | 1 |
| lineage4 | 1 |
| lineage4.3.4.2 | 1 |
| La1.2.BCG | 4 |
| La1.2 | 1 |
| lineage2.2;lineage3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2.1 | 4 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.8 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 73 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11043895 | RR-TB | lineage3 | None | SRR6046152 | Other | lineage4.9 | None | ERR13284279 | MDR-TB | lineage3 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR1173139 | Sensitive | lineage4.9 | None | ERR3283044 | Other | lineage4 | None | SRR6044981 | Sensitive | lineage3 | gb | ERR4188218 | Sensitive | lineage4.9 | None | SRR10129602 | Sensitive | lineage4.3.4.2 | None | SRR1915484 | Other | La1.2.BCG | None | SRR10614047 | Sensitive | lineage4.9 | None | ERR4769478 | Other | La1.2 | None | ERR736850 | Sensitive | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | SRR1173380 | Pre-XDR-TB | lineage2.2;lineage3 | None | SRR1238558 | Other | lineage4.9 | None | SRR8380864 | Other | lineage2.2.1.2 | None | ERR2747615 | Sensitive | lineage4.9 | None | SRR1173800 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR26112172 | Other | lineage3 | None | SRR1915486 | HR-TB | La1.2.BCG | None | ERR2124088 | Other | lineage4.4.1.1 | None | SRR1173421 | Other | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR15368973 | Other | lineage4.9 | None | ERR11043106 | MDR-TB | lineage3 | None | ERR13289757 | Sensitive | lineage3 | None | SRR1173190 | Sensitive | lineage4.9 | None | ERR234219 | Sensitive | lineage3 | None | SRR1173335 | Sensitive | lineage4.9 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | SRR1173344 | Sensitive | lineage4.6.1.1 | None | ERR11049261 | Sensitive | lineage3 | None | SRR15368940 | Sensitive | lineage2.2.1.1 | None | ERR4831631 | Sensitive | lineage4.9 | None | SRR21689949 | Sensitive | lineage3 | None | SRR1238557 | Other | lineage4.9 | None | SRR6152699 | HR-TB | lineage3 | ca | SRR1173764 | Sensitive | lineage4.9 | None | ERR216929 | Sensitive | lineage4.3.4.2.1 | None | ERR3470607 | Sensitive | lineage3 | None | ERR3283034 | Sensitive | lineage4.9 | None | ERR3468549 | Sensitive | lineage4.9 | None | SRR6046290 | Sensitive | lineage3 | gb | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173719 | Other | lineage4.9 | None | ERR164004 | Sensitive | lineage4.9 | None | ERR3470582 | Sensitive | lineage3 | None | ERR4796621 | Pre-XDR-TB | lineage3 | in | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173768 | Sensitive | lineage4.9 | None | ERR023250 | Sensitive | lineage3 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | ERR13283997 | RR-TB | lineage3 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR2747622 | Sensitive | lineage4.9 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR11342646 | HR-TB | lineage3 | None | ERR5162127 | Sensitive | lineage4.9 | None | ERR773804 | Sensitive | lineage4.9 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR12634543 | Sensitive | lineage4.8 | None | ERR736825 | Sensitive | lineage4.9 | None | SRR1173705 | Other | lineage4.9 | None | ERR4798523 | MDR-TB | lineage1.2.2.2 | None | ERR1035152 | HR-TB | lineage3 | sa | SRR1174277 | HR-TB | lineage2.2.1 | None | ERR3468754 | Sensitive | lineage4.9 | None |
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