EBG00000313325 - n.708C>T
Drug resistance types
46 Sensitive
3 RR-TB
5 HR-TB
10 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3;lineage2.2 | 2 |
| lineage4.9 | 33 |
| lineage2.2.1 | 8 |
| lineage4.1.1.3 | 1 |
| lineage4.8 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| 4 | |
| lineage3 | 17 |
| lineage1.1.3.2 | 2 |
| lineage4.9;lineage4.3 | 1 |
| lineage4.3.3 | 3 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage1.1.2 | 1 |
| La1.2.BCG | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| La1.8.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage1.2.2.2 | 1 |
| La1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.6.1;lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR12634543 | Sensitive | lineage4.8 | None | SRR15368940 | Sensitive | lineage2.2.1.1 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR15368973 | Other | None | ERR4819702 | Sensitive | lineage3 | gb | SRR18213900 | MDR-TB | lineage2.2.1 | None | SRR2100367 | MDR-TB | lineage2.2.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR4815763 | Sensitive | lineage3 | gb | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR4812963 | MDR-TB | lineage4.3.3 | None | ERR2124088 | Other | lineage4.4.1.1 | None | ERR216929 | Sensitive | lineage4.3.4.2.1 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817800 | Other | lineage3 | gb | SRR8380864 | Other | lineage2.2.1.2 | None | ERR11049261 | Sensitive | lineage3 | None | ERR4818597 | Sensitive | lineage3 | gb | ERR4814573 | Other | lineage1.1.3.2 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4817421 | Other | La1.2.BCG | gb | ERR4819087 | Other | lineage4.3.3 | None | ERR245790 | Sensitive | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4820845 | MDR-TB | lineage4.8 | None | ERR2747615 | Sensitive | lineage4.9 | None | ERR2747622 | Sensitive | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | ERR2747620 | Sensitive | lineage4.9 | None | ERR4829087 | Sensitive | lineage4.1.2.1 | it | SRR6044981 | Sensitive | lineage3 | gb | SRR6045162 | Sensitive | lineage4.9 | None | SRR6046290 | Sensitive | lineage3 | gb | ERR4831633 | RR-TB | lineage4.9;lineage2.2 | None | SRR6152699 | HR-TB | lineage3 | ca | ERR4831631 | HR-TB | lineage4.9 | None | ERR5162126 | Sensitive | lineage4.9 | None | ERR234219 | Sensitive | lineage3 | None | ERR323041 | HR-TB | None | ERR5162127 | Sensitive | lineage4.9 | None | ERR10796619 | Other | lineage4.3.3 | None | ERR1035152 | HR-TB | lineage3 | sa | ERR023250 | Sensitive | lineage3 | None | ERR3439235 | Sensitive | lineage4.9 | None | ERR11043106 | MDR-TB | lineage3 | None | ERR117716 | MDR-TB | lineage2.2.1 | None | ERR3283034 | Sensitive | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR11043895 | RR-TB | lineage3 | None | ERR3468754 | Sensitive | lineage4.9 | None | ERR3439281 | Sensitive | lineage4.9 | None | ERR3468549 | Sensitive | lineage4.9 | None | ERR3470582 | Sensitive | lineage3 | None | ERR3797060 | Other | La1.8.1 | None | ERR3470607 | Sensitive | lineage3 | None | ERR3797035 | Other | lineage4.9 | None | ERR4188072 | Other | lineage4.9;La1.8.1 | None | ERR3797078 | Sensitive | lineage4.9 | None | ERR4188158 | Other | lineage4.9 | None | ERR4188218 | Sensitive | lineage4.9 | None | ERR7737736 | MDR-TB | lineage2.2.1 | None | ERR4796621 | Pre-XDR-TB | lineage3 | in | ERR4798523 | MDR-TB | lineage1.2.2.2 | None | ERR4769478 | Other | La1.2 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR773804 | Sensitive | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | SRR1173310 | MDR-TB | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173344 | Sensitive | lineage4.6.1.1 | None | SRR1173565 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1173768 | Sensitive | lineage4.9 | None |
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